Gene
KWMTBOMO07007
Pre Gene Modal
BGIBMGA010504
Annotation
PREDICTED:_photoreceptor_outer_segment_membrane_glycoprotein_2-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane Reliability : 4.057
Sequence
CDS
ATGGCCCAGTTCAGGCTCAGTAAGGAGGGTCGGGAGCGGGTGGCTGCTGTTCTTCGCGCTTTGCTGATCGCGCAGTTGGTTGTCTCGCTCTGTATGGTGATCTTTTGCTACAACACCACACAGAAAGTCATGATGCTGCTCAAAAATGTTCACAAGCTGACTGTCTACCTCCTATGCGGGCTGGTTCTCCTGCAAACGTACTGCATGAAACTACACTACACAGCCGGTCTGCGTCTCGTAACCTTACTGCTGAGGTGTCCCTTCTGGTCTCGCGGGTCAAGAGTGGGCAAAATTTGGCTTATCAATGGGCTGATGCTCGTTGCGAATGGGGGGCTGGTGTATGCCGCTTGCAGGGCCACTCTGAAGGTAATTAATATGTTTCATTATCATAGCATTACCTACAGTTTTAGTTTCTCGTTTTGTTTAAAATAA
Protein
MAQFRLSKEGRERVAAVLRALLIAQLVVSLCMVIFCYNTTQKVMMLLKNVHKLTVYLLCGLVLLQTYCMKLHYTAGLRLVTLLLRCPFWSRGSRVGKIWLINGLMLVANGGLVYAACRATLKVINMFHYHSITYSFSFSFCLK
Summary
Similarity
Belongs to the tetraspanin (TM4SF) family.
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00335 Tetraspanin
Interpro
SUPFAM
SSF48652
SSF48652
Gene 3D
ProteinModelPortal
Ontologies
Topology
Length:
143
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
65.21651
Exp number, first 60 AAs:
31.4
Total prob of N-in:
0.02987
POSSIBLE N-term signal
sequence
outside
1 - 14
TMhelix
15 - 37
inside
38 - 52
TMhelix
53 - 75
outside
76 - 94
TMhelix
95 - 117
inside
118 - 143
Population Genetic Test Statistics
Pi
52.072633
Theta
163.335084
Tajima's D
-1.769466
CLR
0.551348
CSRT
0.0324483775811209
Interpretation
Uncertain
