Gene

KWMTBOMO07004  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010473

Annotation

Dynein-1-beta_heavy_chain?_flagellar_inner_arm_I1_complex_[Papilio_machaon]

Location

Bomo_Chr12(-):1579771-1583889      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.714 PlasmaMembrane   Reliability : 1.966

CDS

ATGGCAGCCGCTGTCGTGTTCCTTCGAGGAAATGACGCGTGGCTTATATACATCCACTGCTGGGCTTGCGACAAGAAAGTACAGCCGGGCATTTCAAAATTAACTTGGACTTCAAATATGTCCGACGCCTACATTGCCGATTGCGTTACACAAATTGGAGAATTTCAAGACTTTTTAACGACGTACAAGAATTGCAATGTTAATTTAGTGAAAATCATGGAGAAAATATGCGACACTCCACTGATCGAGTTTGACGTCTATAATGTTTTTGAGATCAAAGACTTACGAGCTAAAATACGAACTATGCAAGCAGGGGCTGCTTCTAAAATATTGGACATGTACAAGGAAATTGTGATTTATATAATCATAGTTTATGAGGGTTTCGAACCGTATATACCTCAGATGGCTGAATATTGGGTTCGGTACGTGAGAAGGTTTGATCGTTTATTAGAAGACGCACTAAGGTTAGCTATCAAAGGAACTATGCAGAACATTTATAAATGTGTTCACGGTGATGGGACAATGGCGCCGGCACCTCTTATAAAAATGAAACTTTTCTTGACCGGAAAAGATATCGTTTACGTACCAACCGAACAGGAAATAAAGGATACATTCAATTCTATCCTCGAGGAGATCGTTCATATATTGAGCACAGTTCCGAGATTATTCGAGAAGTTTGCGTTGCCCGCCGGCGGACTTAGGAGGTTTTATGAAGCGATACAAATCGACCTTGATTGTAATAAATTACAGTCGCTTATTGACGCCGAAATTGAATACAATTTATCGCTCATCAATGATCATATATGCATGTGGGATCCTTACGCGCATATTTGGAACGTAAACAAGGATCAGTTTTTAGAACAGTATCGCTTAGAGAAGCACACGGCGGCAGAATTTGATGCTTTGATAATTAATTACAGCAACTTAGCCAATAGCGTTCAGATACAGGAGACCATCAATCAGGTACGTTATTTTGACGGACTACGACACAAATATGCCATCTTGTCTTGGAGTCTTGGAATACATTCCTTTCGTTAG

Protein

MAAAVVFLRGNDAWLIYIHCWACDKKVQPGISKLTWTSNMSDAYIADCVTQIGEFQDFLTTYKNCNVNLVKIMEKICDTPLIEFDVYNVFEIKDLRAKIRTMQAGAASKILDMYKEIVIYIIIVYEGFEPYIPQMAEYWVRYVRRFDRLLEDALRLAIKGTMQNIYKCVHGDGTMAPAPLIKMKLFLTGKDIVYVPTEQEIKDTFNSILEEIVHILSTVPRLFEKFALPAGGLRRFYEAIQIDLDCNKLQSLIDAEIEYNLSLINDHICMWDPYAHIWNVNKDQFLEQYRLEKHTAAEFDALIINYSNLANSVQIQETINQVRYFDGLRHKYAILSWSLGIHSFR

Similarity

Belongs to the ephrin family.

Uniprot

H9JLS1   A0A194QNC6   A0A194PIV2   A0A2H1WSD3   A0A3S2LVM1   A0A2W1BCK7   + More
A0A139WBF9   U4U449   N6TGV9   A0A2J7PKD6   E0VRS1   A0A1B6GI93   K7J522   A0A2P8XNQ1   A0A232FJ76   T1GA20   A0A1B6E9Y9   A0A1B6CE00   A0A026VYL0   A0A151IDR4   A0A151WED7   A0A151J3Q5   A0A195FFT1   E2C2D9   A0A158NBM9   A0A195BEV7   A0A1A9UZ62   A0A1B0C1D8   A0A088AGE0   A0A1A9X8E5   A0A0L0CHS0   A0A1B0G1Q7   E1ZVJ0   A0A1B0C1D9   A0A1A9X8E6   A0A1B0A5J4   A0A210QEN0   A0A1A9ZES5   F4WJJ9   A0A3M6T609   A0A310SN52   A0A154PKQ9   A0A2B4SSD1   R7TTV6   A0A0A1XRG0   A0A1J1I591   V4AL85   A0A2T7NDA5   W4Y9K3   A0A183AL16   W4ZLH2   A0A2G9P413   A0A0K8W9W9   A0A0K8W319   E7EZB9   A0A1I8MW68   A0A1D5NT12   A0A1I8PQ03   A0A2C9JP30   A0A2C9JP23   B4YLL8   B5DUM3   K1PG48   A0A2G9SER8   A0A1Y2BV13   B3RUD9   A0A369SGH2   A0A2A3EFU6   A0A0R3NW00   A7SQG6   B4YLL6   C3ZEM0   B5DHV8   B4GQL7   H3A7W8   A0A1B8Y1E3   W5N7B2   W5N7C9   B4YLM5   B4YLM0   A0A1L8H3M0   A0A183S7F1   A0A3P7BFW5   A0A3B4VIC0   W5K6W3   A0A1W5BAL8   H2ZI77   B4YLL7   H2ZI80   A0A151NUA9   A0A151NUI7   B3MUB5   A0A3P9APV0   A0A2K6FUH7   B4YLM3   A0A1U8DMC0   H3A7W7  

Pubmed

19121390    26354079    28756777    18362917    19820115    23537049    + More
20566863    20075255    29403074    28648823    24508170    20798317    21347285    26108605    28812685    21719571    30382153    23254933    25830018    23594743    25315136    15562597    15632085    17994087    22992520    18719581    30042472    17615350    18563158    23185243    9215903    20431018    27762356    25329095    22293439    25069045   

EMBL

BABH01005183    KQ461194    KPJ06859.1    KQ459603    KPI92978.1    ODYU01010314    + More
SOQ55334.1    RSAL01000003    RVE54736.1    KZ150161    PZC72708.1    KQ971372    KYB25181.1    KB631679    ERL85346.1    APGK01038540    KB740960    ENN77013.1    NEVH01024940    PNF16790.1    DS235494    EEB16077.1    GECZ01007615    JAS62154.1    AAZX01000330    PYGN01001635    PSN33631.1    NNAY01000118    OXU30796.1    CAQQ02000411    CAQQ02000412    CAQQ02000413    GEDC01002624    JAS34674.1    GEDC01025778    JAS11520.1    KK107574    EZA48745.1    KQ977978    KYM98389.1    KQ983238    KYQ46233.1    KQ980259    KYN17075.1    KQ981606    KYN39560.1    GL452124    EFN77889.1    ADTU01000355    ADTU01000356    ADTU01000357    ADTU01000358    ADTU01000359    KQ976509    KYM82700.1    JXJN01023990    JXJN01023991    JRES01000383    KNC31762.1    CCAG010017219    GL434547    EFN74800.1    NEDP02004020    OWF47169.1    GL888184    EGI65615.1    RCHS01004213    RMX36856.1    KQ759821    OAD62685.1    KQ434948    KZC12413.1    LSMT01000010    PFX33584.1    AMQN01010963    KB308597    ELT97318.1    GBXI01000730    JAD13562.1    CVRI01000037    CRK93545.1    KB199651    ESP04959.1    PZQS01000014    PVD19154.1    AAGJ04130935    UZAN01044886    VDP81669.1    AAGJ04130936    AAGJ04130937    AAGJ04130938    AAGJ04130939    AAGJ04130940    AAGJ04130941    AAGJ04130942    AAGJ04130943    AAGJ04130944    KV923439    PIN98091.1    GDHF01004437    JAI47877.1    GDHF01006808    JAI45506.1    AL935046    AL954772    CU570992    EU595399    ACC62142.1    CH673991    EDY71590.2    JH815791    EKC22887.1    KV924144    PIO38637.1    MCGO01000043    ORY38586.1    DS985244    EDV25795.1    NOWV01000011    RDD46015.1    KZ288271    PBC29861.1    CH475573    KRT05116.1    DS469745    EDO34077.1    EU595397    ACC62140.2    GG666612    EEN49176.1    CH379059    EDY69885.1    KRT03738.1    KRT03739.1    CH479187    EDW39889.1    AFYH01210664    AFYH01210665    AFYH01210666    AFYH01210667    AFYH01210668    AFYH01210669    AFYH01210670    AFYH01210671    AFYH01210672    AFYH01210673    KV460567    OCA16756.1    AHAT01030211    AHAT01030212    AHAT01030213    AHAT01030214    AHAT01030215    AHAT01030216    AHAT01030217    AHAT01030218    AHAT01030219    AHAT01030220    EU595403    ACC62149.2    EU595401    ACC62144.2    CM004470    OCT90707.1    UYSU01000080    VDL84400.1    EU595398    ACC62141.2    AKHW03001925    KYO40447.1    KYO40448.1    CH902624    EDV33444.2    EU595402    ACC62147.2   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000007266    UP000030742    + More
UP000019118    UP000235965    UP000009046    UP000002358    UP000245037    UP000215335    UP000015102    UP000053097    UP000078542    UP000075809    UP000078492    UP000078541    UP000008237    UP000005205    UP000078540    UP000078200    UP000092460    UP000005203    UP000092443    UP000037069    UP000092444    UP000000311    UP000092445    UP000242188    UP000007755    UP000275408    UP000076502    UP000225706    UP000014760    UP000183832    UP000030746    UP000245119    UP000007110    UP000050740    UP000000437    UP000095301    UP000095300    UP000076420    UP000001819    UP000005408    UP000193642    UP000009022    UP000253843    UP000242457    UP000001593    UP000001554    UP000008744    UP000008672    UP000008143    UP000018468    UP000186698    UP000050788    UP000275846    UP000261420    UP000018467    UP000007875    UP000050525    UP000007801    UP000265140    UP000233160    UP000189705   

PRIDE

H9JLS1   

Pfam

PF08393   DHC_N2        + More
PF08385   DHC_N1
PF12774   AAA_6
PF12780   AAA_8
PF17857   AAA_lid_1
PF17852   Dynein_AAA_lid
PF12777   MT
PF18199   Dynein_C
PF18198   AAA_lid_11
PF03028   Dynein_heavy
PF12781   AAA_9
PF00812   Ephrin

Interpro

IPR013602   Dynein_heavy_dom-2        + More
IPR013594   Dynein_heavy_dom-1       
IPR042222   Dynein_2_N       
IPR042228   Dynein_2_C       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR035699   AAA_6       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR027417   P-loop_NTPase       
IPR041589   DNAH3_AAA_lid_1       
IPR024743   Dynein_HC_stalk       
IPR035706   AAA_9       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       
IPR004273   Dynein_heavy_D6_P-loop       
IPR042219   AAA_lid_11_sf       
IPR018247   EF_Hand_1_Ca_BS       
IPR026983   DHC_fam       
IPR008972   Cupredoxin       
IPR001799   Ephrin_RBD       

SUPFAM

SSF52540   SSF52540        + More
SSF49503   SSF49503       

Gene 3D

1.20.140.100     3.20.180.20     1.10.8.720     2.60.40.420    

ProteinModelPortal

H9JLS1   A0A194QNC6   A0A194PIV2   A0A2H1WSD3   A0A3S2LVM1   A0A2W1BCK7   + More
A0A139WBF9   U4U449   N6TGV9   A0A2J7PKD6   E0VRS1   A0A1B6GI93   K7J522   A0A2P8XNQ1   A0A232FJ76   T1GA20   A0A1B6E9Y9   A0A1B6CE00   A0A026VYL0   A0A151IDR4   A0A151WED7   A0A151J3Q5   A0A195FFT1   E2C2D9   A0A158NBM9   A0A195BEV7   A0A1A9UZ62   A0A1B0C1D8   A0A088AGE0   A0A1A9X8E5   A0A0L0CHS0   A0A1B0G1Q7   E1ZVJ0   A0A1B0C1D9   A0A1A9X8E6   A0A1B0A5J4   A0A210QEN0   A0A1A9ZES5   F4WJJ9   A0A3M6T609   A0A310SN52   A0A154PKQ9   A0A2B4SSD1   R7TTV6   A0A0A1XRG0   A0A1J1I591   V4AL85   A0A2T7NDA5   W4Y9K3   A0A183AL16   W4ZLH2   A0A2G9P413   A0A0K8W9W9   A0A0K8W319   E7EZB9   A0A1I8MW68   A0A1D5NT12   A0A1I8PQ03   A0A2C9JP30   A0A2C9JP23   B4YLL8   B5DUM3   K1PG48   A0A2G9SER8   A0A1Y2BV13   B3RUD9   A0A369SGH2   A0A2A3EFU6   A0A0R3NW00   A7SQG6   B4YLL6   C3ZEM0   B5DHV8   B4GQL7   H3A7W8   A0A1B8Y1E3   W5N7B2   W5N7C9   B4YLM5   B4YLM0   A0A1L8H3M0   A0A183S7F1   A0A3P7BFW5   A0A3B4VIC0   W5K6W3   A0A1W5BAL8   H2ZI77   B4YLL7   H2ZI80   A0A151NUA9   A0A151NUI7   B3MUB5   A0A3P9APV0   A0A2K6FUH7   B4YLM3   A0A1U8DMC0   H3A7W7  

KEGG

101737362    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 2, axonemal-like

GO

GO:0007018   GO:0003777   GO:0031514   GO:0005524   GO:0030286   GO:0016021   GO:0051959   GO:0045503   GO:0005930   GO:0008569   GO:0045505   GO:0016020  

PANTHER

PTHR10676  

Length:

345

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.501209999999999

Exp number, first 60 AAs:

0.00778

Total prob of N-in:

0.02647

outside

1  -  345

 

 

Pi

222.849021

Theta

177.040493

Tajima's D

0.989711

CLR

0.012892

CSRT

0.655617219139043

Interpretation

Uncertain