Gene

KWMTBOMO06998  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010476

Annotation

scavenger_receptor_class_B_member_3_[Bombyx_mori]

Location

Bomo_Chr12(-):1467653-1507169      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.577

CDS

ATGAAGATGGTGTCTTCCGGAGTGAAAAGCGGTCTGTTCATGGGCTTCGGGTCAGCGCTGGTCCTTATCGGTGCTATCGTAGTAGTATACTGGCCTTCCCTCTTCATGGCTCAGTTACAGAGGATGATGATCCTATCGCCGACCTCAACGTCGTTCGGTATATGGCAGGAGACTCCAATACCGATGTACCTGGAATGCTACATGTTCAACATAACGAACGCGGATAAGATCCTCGCGAAAGAGGACGTAATACTGAAAGTGGAGCAGTTGGGTCCTTACGTGTTCAGGGAGTCACATTCTAAGGTGAACCTGACTTGGAATGATAACAGCACAATCACATTCTACAATCAGAGATTTTGGCACTTCGACCAGAATTTGTCGAAGGGAAGTCTTTCGGATGAGATTATCAGCATCAACCCTATAATAGCGACTGTGGCGTACATTGTCAGACACCAGCCCAGGGTCGTCAAGGTGTCCGTTGACGTTTTCCTGCGAATGTTCCACGACGACCTCTTCCTGAAGGCGAACGTCTCGTCCTGGCTGTTCGAAGGCATCGAAGACCCGGTTTTGGAGATGGCCCAAAAGTTTCCCGATCTACCCTTGAATATACCGTACGACAAATTCGGATGGTTCTATGAGCGCAATGGCTCGAGGGAATTTGACGGTTCGTTCATAATGAACACGGGAGCGGCGGACTTCTCGCGGCTCGGCAACATTGAGCTGTGGAAGTACTCCCCCAGGACCGTGTTCAGAGACCACTGCGGAGACGTGAAGGGGTCCACCGGGGAGCTATGGGCCCCAGAGCTGGGGCAACCCGAGTTGTTCGTCTTCGCGTCCGACATATGCACATACCTGACACTGCACAAGAAGGAAGACGTGCTGATAGAAAACATAGAGGGCGTTCGGTACGCGGCCAACGACTCGCTGTTCGACAACGGACACAAATATCCCGCAATGGCGTGCTACTGCGACGAGGTTAGGGACCGGGACTGCGTGCCCCCCGGCGCCCTCAACGTGTCCCTGTGCCGCCTGGGAGCCCCGGCCTTCGTGTCCCAGCCGCACTTCCTGGACGCGGACCCGTACTACCCCAGCAAGATCCAGGGTCTGGACCCGCAGGAGGAGCACAGGTTCAGCCTGGCGCTGGAGATGTTCACCGGGATGCCGCTGGCCGTATCCGCGCAGCTGCAGATCAACCTGCTCATCAGAGATGTCTGGGGGATAAGTATCAACAACGTGTTGCCGGACCCGGACACGATGGTGCCGATGTTCTGGTTCCGGCAAGAGCTGCAGGTGACGCCGGAGTACGCGCACATGGCCAGAGTCGCTCTTGCGCTTCGATACTACACTCCATACGCGCTCTACACCCTCACCGTAATCGGCGTGGTCCTCATATTAGTAGGTGTAGTCGTACTAATCAGAAGACTTCTGAATTCATCAGACACGACGCCTCTCATAGAAGAAAGTGCGTCACAAGAGAATCAACAATAA

Protein

MKMVSSGVKSGLFMGFGSALVLIGAIVVVYWPSLFMAQLQRMMILSPTSTSFGIWQETPIPMYLECYMFNITNADKILAKEDVILKVEQLGPYVFRESHSKVNLTWNDNSTITFYNQRFWHFDQNLSKGSLSDEIISINPIIATVAYIVRHQPRVVKVSVDVFLRMFHDDLFLKANVSSWLFEGIEDPVLEMAQKFPDLPLNIPYDKFGWFYERNGSREFDGSFIMNTGAADFSRLGNIELWKYSPRTVFRDHCGDVKGSTGELWAPELGQPELFVFASDICTYLTLHKKEDVLIENIEGVRYAANDSLFDNGHKYPAMACYCDEVRDRDCVPPGALNVSLCRLGAPAFVSQPHFLDADPYYPSKIQGLDPQEEHRFSLALEMFTGMPLAVSAQLQINLLIRDVWGISINNVLPDPDTMVPMFWFRQELQVTPEYAHMARVALALRYYTPYALYTLTVIGVVLILVGVVVLIRRLLNSSDTTPLIEESASQENQQ

Similarity

Belongs to the CD36 family.

Uniprot

D2KXB2   H9JLS4   A0A1E1WFQ5   A0A1E1WCD1   A0A2A4JQ46   A0A3S2P2C8   + More
A0A2H1W793   A0A2W1B9R7   A0A194QMT9   A0A194QKR3   A0A212EWB0   A0A212EWD3   A0A0L7RE26   A0A1Y1ME42   A0A310SI06   A0A182K7G5   A0A067RMF2   A0A182TUQ6   A0A0M9A3Q8   A0A182HQX0   A0A182KJJ7   A0A182UZ84   A0A182J4G5   A0A182WXJ4   Q7PMH9   W5JRD6   A0A2M4BM64   A0A2A3EDW6   A0A2M4BLB4   A0A2M4BLB3   A0A2M4BLB8   A0A182QLD0   A0A023ET26   A0A087ZYQ7   E2A0F3   E2C7F5   A0A1W4WU99   A0A1W4WU80   B0W704   A0A1Q3FEL4   A0A182W8E1   A0A154PEP9   A0A182YQV0   A0A3L8DIT0   A0A026W5Y0   A0A151IFR4   K7IWF8   A0A232F1S2   A0A182NNN7   A0A1B0D2U3   A0A2J7RNU4   A0A0C9RN95   A0A151X567   A0A1J1I2L1   U5EZE5   A0A1L8DKA4   Q16VV3   A0A1S4FM88   A0A224XP98   A0A023EZ93   A0A182MN33   A0A1B6CTY0   A0A195BE85   A0A195FIU3   A0A0P6J545   A0A1L8DJX1   A0A158NR93   A0A182PVX8   A0A2J7Q8A1   A0A182GJV6   J3JXY8   N6TC26   U4UH84   E9IRY5   A0A151IU39   F4WB16   A0A1D2NCL7   A0A2P8YIK7   T1HQI4   A0A1D2NF22   A0A226EP64   A0A1B0CAI6   A0A2M4BPC2   E9FT77   A0A1B6DBG4   A0A2J7RNS7   A0A182FN08   A0A1Y1KQE4   A0A1D2MVX9   A0A0P5E628   B4LTL7   A0A0P5Y2T4   A0A0P6AEN3   A0A182WTW9   A0A182VL85   A0A182HUI5   Q7PNB3   B4JDP8   A0A067RK86  

Pubmed

20053988    19121390    28756777    26354079    22118469    28004739    + More
24845553    20966253    12364791    14747013    17210077    20920257    23761445    24945155    20798317    25244985    30249741    24508170    20075255    28648823    17510324    25474469    26999592    21347285    26483478    22516182    23537049    21282665    21719571    27289101    29403074    21292972    17994087    18057021   

EMBL

AB515345    BAI66271.1    BABH01005172    BABH01005173    BABH01005174    BABH01005175    + More
GDQN01005231    JAT85823.1    GDQN01006449    GDQN01002999    JAT84605.1    JAT88055.1    NWSH01000912    PCG73563.1    RSAL01000046    RVE50581.1    ODYU01006768    SOQ48917.1    KZ150380    PZC71095.1    KQ461194    KPJ06853.1    KQ458671    KPJ05505.1    AGBW02012020    OWR45788.1    OWR45789.1    KQ414613    KOC69079.1    GEZM01036247    JAV82860.1    KQ759870    OAD62418.1    KK852424    KDR24183.1    KQ435765    KOX75333.1    APCN01001607    AAAB01008980    EAA13815.3    ADMH02000643    ETN65470.1    GGFJ01004717    MBW53858.1    KZ288269    PBC29900.1    GGFJ01004718    MBW53859.1    GGFJ01004719    MBW53860.1    GGFJ01004716    MBW53857.1    AXCN02001996    GAPW01001160    JAC12438.1    GL435586    EFN73090.1    GL453369    EFN76142.1    DS231851    EDS37278.1    GFDL01009059    JAV25986.1    KQ434875    KZC09768.1    QOIP01000007    RLU20261.1    KK107390    EZA51413.1    KQ977771    KYN00005.1    NNAY01001229    OXU24681.1    AJVK01002848    AJVK01002849    NEVH01002148    PNF42494.1    GBYB01014957    JAG84724.1    KQ982540    KYQ55429.1    CVRI01000038    CRK93828.1    GANO01000941    JAB58930.1    GFDF01007314    JAV06770.1    CH477580    EAT38706.2    GFTR01006575    JAW09851.1    GBBI01004172    JAC14540.1    AXCM01005076    GEDC01020342    JAS16956.1    KQ976504    KYM82896.1    KQ981522    KYN40585.1    GDUN01000692    JAN95227.1    GFDF01007315    JAV06769.1    ADTU01023830    NEVH01016966    PNF24814.1    JXUM01068925    JXUM01068926    JXUM01068927    KQ562525    KXJ75697.1    BT128110    AEE63071.1    APGK01043534    APGK01043535    APGK01043536    KB741015    ENN75288.1    KB632161    ERL89265.1    GL765283    EFZ16682.1    KQ980970    KYN10930.1    GL888056    EGI68636.1    LJIJ01000091    ODN02981.1    PYGN01000568    PSN44095.1    ACPB03023768    LJIJ01000063    ODN03822.1    LNIX01000002    OXA59423.1    AJWK01003826    GGFJ01005650    MBW54791.1    GL732524    EFX89326.1    GEDC01014353    JAS22945.1    PNF42490.1    GEZM01076808    JAV63633.1    LJIJ01000462    ODM97219.1    GDIP01146046    JAJ77356.1    CH940649    EDW64990.1    KRF81970.1    KRF81971.1    GDIP01063756    LRGB01003123    JAM39959.1    KZS04220.1    GDIP01030748    JAM72967.1    APCN01002463    AAAB01008964    EAA12460.5    CH916368    EDW03418.1    KDR24217.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000053825    UP000075881    UP000027135    UP000075902    UP000053105    UP000075840    UP000075882    UP000075903    UP000075880    UP000076407    UP000007062    UP000000673    UP000242457    UP000075886    UP000005203    UP000000311    UP000008237    UP000192223    UP000002320    UP000075920    UP000076502    UP000076408    UP000279307    UP000053097    UP000078542    UP000002358    UP000215335    UP000075884    UP000092462    UP000235965    UP000075809    UP000183832    UP000008820    UP000075883    UP000078540    UP000078541    UP000005205    UP000075885    UP000069940    UP000249989    UP000019118    UP000030742    UP000078492    UP000007755    UP000094527    UP000245037    UP000015103    UP000198287    UP000092461    UP000000305    UP000069272    UP000008792    UP000076858    UP000001070   

PRIDE

D2KXB2    H9JLS4   

Pfam

PF01130   CD36        + More
PF00339   Arrestin_N
PF02752   Arrestin_C
PF02100   ODC_AZ

Interpro

IPR002159   CD36_fam        + More
IPR005428   CD36/SCARB1/SNMP1       
IPR000698   Arrestin       
IPR014756   Ig_E-set       
IPR011022   Arrestin_C-like       
IPR017864   Arrestin_CS       
IPR014753   Arrestin_N       
IPR011021   Arrestin-like_N       
IPR014752   Arrestin_C       
IPR016181   Acyl_CoA_acyltransferase       
IPR002993   ODC_AZ       
IPR038581   ODC_AZ_sf       

SUPFAM

SSF81296   SSF81296        + More
SSF55729   SSF55729       

Gene 3D

2.60.40.640     2.60.40.840     3.40.630.60    

ProteinModelPortal

D2KXB2   H9JLS4   A0A1E1WFQ5   A0A1E1WCD1   A0A2A4JQ46   A0A3S2P2C8   + More
A0A2H1W793   A0A2W1B9R7   A0A194QMT9   A0A194QKR3   A0A212EWB0   A0A212EWD3   A0A0L7RE26   A0A1Y1ME42   A0A310SI06   A0A182K7G5   A0A067RMF2   A0A182TUQ6   A0A0M9A3Q8   A0A182HQX0   A0A182KJJ7   A0A182UZ84   A0A182J4G5   A0A182WXJ4   Q7PMH9   W5JRD6   A0A2M4BM64   A0A2A3EDW6   A0A2M4BLB4   A0A2M4BLB3   A0A2M4BLB8   A0A182QLD0   A0A023ET26   A0A087ZYQ7   E2A0F3   E2C7F5   A0A1W4WU99   A0A1W4WU80   B0W704   A0A1Q3FEL4   A0A182W8E1   A0A154PEP9   A0A182YQV0   A0A3L8DIT0   A0A026W5Y0   A0A151IFR4   K7IWF8   A0A232F1S2   A0A182NNN7   A0A1B0D2U3   A0A2J7RNU4   A0A0C9RN95   A0A151X567   A0A1J1I2L1   U5EZE5   A0A1L8DKA4   Q16VV3   A0A1S4FM88   A0A224XP98   A0A023EZ93   A0A182MN33   A0A1B6CTY0   A0A195BE85   A0A195FIU3   A0A0P6J545   A0A1L8DJX1   A0A158NR93   A0A182PVX8   A0A2J7Q8A1   A0A182GJV6   J3JXY8   N6TC26   U4UH84   E9IRY5   A0A151IU39   F4WB16   A0A1D2NCL7   A0A2P8YIK7   T1HQI4   A0A1D2NF22   A0A226EP64   A0A1B0CAI6   A0A2M4BPC2   E9FT77   A0A1B6DBG4   A0A2J7RNS7   A0A182FN08   A0A1Y1KQE4   A0A1D2MVX9   A0A0P5E628   B4LTL7   A0A0P5Y2T4   A0A0P6AEN3   A0A182WTW9   A0A182VL85   A0A182HUI5   Q7PNB3   B4JDP8   A0A067RK86  

PDB

6I2K     E-value=2.8983e-40,     Score=416

KEGG

100328604    no KO assigned | (RefSeq) SCRB3, BmSCRB3, Cameo1; scavenger receptor class B member 3

GO

GO:0016021   GO:0007165   GO:0008073   GO:0016740   GO:0090382   GO:0002433   GO:0006915   GO:0016020   GO:0008270   GO:0003700   GO:0005667   GO:0007179   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR11923   PTHR11792  

Length:

495

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.79481

Exp number, first 60 AAs:

22.86836

Total prob of N-in:

0.97536

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  449

TMhelix

450  -  472

inside

473  -  495

 

 

Pi

228.420521

Theta

168.364418

Tajima's D

-2.334027

CLR

0.866595

CSRT

0.00244987750612469

Interpretation

Possibly Positive selection