Gene
KWMTBOMO06994
Pre Gene Modal
BGIBMGA010479
Annotation
PREDICTED:_uncharacterized_protein_LOC101742944_[Bombyx_mori]
Location in the cell
Extracellular Reliability : 2.257 Nuclear Reliability : 1.679
Sequence
CDS
ATGTTCCCTGCCACTAGCCTGTTTTGCCAGTTCCGATCACGGCGCGCACGCAATATGCTGTGTCTATCGTTATTCTTGGTGCTCCTTACGACTCCCATATGGACCTATGTTACCGAAACGCCCTCTTTCATTGATCGTCTTGGCAAACTTTACGAGAAACTTGAAAAAATCACAATAGCACCCACGCCAGATAATTTCGGATCGAATTCTAAAGATAAGCTTTACGCGAAGCTGGAGAGATTTAACGCGTTGTCGCCCGATAAATTCGAGTTGTCTGATGAAGAAGAAGAGTTGATATCTACTATGGAGAAGTGGGGGCTCAGTGCTGATCAAATGGATATTATAGTGAAGGAATTGCAACGGACCAGGGAGGATGATGAAGAGAAAATTGAGAGAAATGAAGAATACAACGACGAGGATGAGTTGCTGAAAGATCTTTCCGAAGGCGACTACCTAAACGACAAAGACTGGGAGACTGAGGACGAGGTCACATTCTCTACATCCAAGCCACTTCTCGGAACCATGCCCTCGGCATTCACTAAGACCACCTACAAAAAGACTATCATATCAGCCGCTGAACCGATCGCTTTGACGAATGAGAGACCCAGAATCTTGGATGAAACATCATTAACCAAATTGGGAACGCAGCTTCGTCAGGAGGCGTTCGCTAACGCGGCCAAGTTCATCAGGGAGAGTAGATGTCACACTCCACAAGCTCGCTGGCTCACCGTCCGGCAGATGGCGCCCGCCGCGGATACAAACTACATGCCCTCGTGTGTCCGGCTCCACCGTTGCACTCCTGACTCCGGCTGTTGTACCAACGACGCTGACATATGCGCACCCATCGAAGGGAAATATGTCGCATTACCATTTTATTTACACAAAGCAGACGGTAACACGAACGTGGCCAGAATGGTGTTCTACAACCACACTAAATGCGCCTGCGTCTCCAGAGAGACTCTGCAGACGACTATCAGAACCAGGATCGAGAGCAAGCCCGAGCCTGAGCCAAGGAGAGACCTGGCCATCGAAAGTCAAAACGACTGGAGGATGCCCACGGAAGCTCCGAAGCTGGACAGCGAGGAGCCAACAGCCCCTCCACAACTACGCAGATGCACCTGTCCGACTTTGTTCTTGAGTACACCAGAGAACGGCTCTTGCTCTTGCATCTGCGACTGGCCCGAAGCCGCCCGTCGGAGGGACTGCCTGTCCCTCGCGCGAGGCAAGGAGCACTTCGGCCTCCGAGACCGCGTCTGCGTAGCACAAGGACACTGCAACCAGCCGTCCTGTGAATACGGATCTTACGACAAAACTAACGGGATATGTCCTCTGCGCAGATTCAGAAGACTAAGGTTCCATCGTGTTAGGCCACAGCCGGAGAAAACCATGGTGGTTTGA
Protein
MFPATSLFCQFRSRRARNMLCLSLFLVLLTTPIWTYVTETPSFIDRLGKLYEKLEKITIAPTPDNFGSNSKDKLYAKLERFNALSPDKFELSDEEEELISTMEKWGLSADQMDIIVKELQRTREDDEEKIERNEEYNDEDELLKDLSEGDYLNDKDWETEDEVTFSTSKPLLGTMPSAFTKTTYKKTIISAAEPIALTNERPRILDETSLTKLGTQLRQEAFANAAKFIRESRCHTPQARWLTVRQMAPAADTNYMPSCVRLHRCTPDSGCCTNDADICAPIEGKYVALPFYLHKADGNTNVARMVFYNHTKCACVSRETLQTTIRTRIESKPEPEPRRDLAIESQNDWRMPTEAPKLDSEEPTAPPQLRRCTCPTLFLSTPENGSCSCICDWPEAARRRDCLSLARGKEHFGLRDRVCVAQGHCNQPSCEYGSYDKTNGICPLRRFRRLRFHRVRPQPEKTMVV
Summary
Similarity
Belongs to the PDGF/VEGF growth factor family.
Uniprot
Pubmed
Proteomes
Pfam
PF00341 PDGF
SUPFAM
SSF57501
SSF57501
Gene 3D
ProteinModelPortal
PDB
6D3O
E-value=0.00165037,
Score=99
Ontologies
GO
Topology
SignalP
Position: 1 - 35,
Likelihood: 0.551331
Length:
465
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.18195
Exp number, first 60 AAs:
19.18195
Total prob of N-in:
0.99522
POSSIBLE N-term signal
sequence
inside
1 - 19
TMhelix
20 - 37
outside
38 - 465
Population Genetic Test Statistics
Pi
162.42391
Theta
135.234545
Tajima's D
0.711906
CLR
0.549837
CSRT
0.581470926453677
Interpretation
Uncertain
