SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06991  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010483
Annotation
cuticular_protein_RR-1_motif_54_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.152
 

Sequence

CDS
ATGGGAGAGACTACACAATCTCAGTCATCTTTTGGACAAGCTCACGGCCCAACTGAGGCGTTTCTAGCATTCATCGCGTATGCGGCGGCCCAGTACAATGAGGACCGCGCCCCTCGATACATAGCCACTGAGCCTAAAGAAGTCTCCACGCCTGTGCCCATACTGAAACAGATAAACAGACACAACGAAGACGGCTCCTACACTTATGGCTATGAAGCCGCCGATGGATCCTTCAAGATCGAGACTAAATCGCAAGCAGGTGATGTGAAGGGCAAATATGGATACAAGGACGACACTGGCAAGCTACGAGTGATTGAGTACGGCGCCAACAAATACGGATTCCAGCCAGCCGGCGAGGGCATCACCGTTGCGCCTCCAACCCTCGTCGACGAGTCGACCAGGGACGAGGGACTCAGACCCGGGAAGTCGCAGGGAGGTCGATCACAGTACCGAGCCCCGGCTCCACAACCAGACTATGACTACGAGGAACCCGCGCCTGCACCGCCCCCGCGACCCCGTCCCCAACCGCAACCACAACCCCAGTACCGCGCCCCCGCCCCTCGTCCACAACCCCAGCCACAACAACAATACAGACCGGCCCCGCAACCTCAGCAACAGTACAGACCGAACCCCCAACCACAACAGCAATACCGGCCTGAACAATCTGCTGCCCCGACTCCACCTAAGGACTATGGTATCTATCCATGGGAGCTCACAAAATTACTTAAGCTTATGTACTAA
Protein
MGETTQSQSSFGQAHGPTEAFLAFIAYAAAQYNEDRAPRYIATEPKEVSTPVPILKQINRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGKLRVIEYGANKYGFQPAGEGITVAPPTLVDESTRDEGLRPGKSQGGRSQYRAPAPQPDYDYEEPAPAPPPRPRPQPQPQPQYRAPAPRPQPQPQQQYRPAPQPQQQYRPNPQPQQQYRPEQSAAPTPPKDYGIYPWELTKLLKLMY

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
246
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.45113
Exp number, first 60 AAs:
0.45097
Total prob of N-in:
0.10234
outside
1  -  246
 
 

Population Genetic Test Statistics

Pi
181.883396
Theta
156.325322
Tajima's D
0.563045
CLR
0.198196
CSRT
0.529873506324684
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 HNDAVSEMGEQIDQINK 100.00 3e-07
29197581 YGYIDPDGNKR 100.00 3e-07
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