SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06990
Pre Gene Modal
BGIBMGA010501
Annotation
PREDICTED:_uncharacterized_protein_LOC101737072_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.32
 

Sequence

CDS
ATGATGCTCCTCCTGCTCATCGCGTGTGTCGCAGTTACAACTGCCGAAAATGCCACTAAAGATTCAACCGAACCACCTTCGAACACCACTAAAGAGATCTTGAAAGCTAGTGAAACAGCTGATGCATCAAAAGTTGAAATAGTCAAGCAAATAAGGAGACTTAACGACGACGGGTCTTATACTATTGGATATGAGGCTGACGACGGTACGTTTAAGATTGAGAGTAGGGATGTGCGCGGTAATGTGAAGGGAACTTTTGGATATATCGACAAGGATGGTGAAATCAAACGGGTGACGTACTCGTCTTCTGGGGAAAGCACTCCGATCCCGGTGACAACAACCACAACGACCACGCAAAGCTCCCCAACGATGATAGTGAGAGTGAATAAAACTGTGTCGTCGACTACAAGGAGACCACTAGCCACTGTGGTGTATCCGACTCGGAGTAGCTTCACGACTAGAGGTACCGTAATTCAATCTATACCGAGAAGGAGAGGCTCCAGTACGAGACCTCCAAACACAACCGAATCAACGACTGAGCAACAGAATCTCGAGGATACAACCAGCAGCATTTTGAATTTGTACAAACCGAAAGTCGAGGAGAACATTAGAACGAGAACACAAATATTAAAACCCATGTCAGATATACTTAAAGACGACCTGGTGACAAGGCAGACTACGACCAAATTGCCGCAAACCGTGAAGCCCGTTTATGAGCACGTAACCGAAAAGGCACCGGAGAGTGTGCTGAAGATGAACACATTTCGAAGAGAGTTACCAAGTACGACTACTAACCCTCATATGATCAACCTTCAGCAGTCAGCTGGTGATGATTCCACTGACGAATACGGAAGTCAGCTGTCACTTGGAACTATACGTCCATTGTTTACGACGACCACTCCACGACCTCGATTGGTTCCTATTCAATCAATAGTGGCAGCAAGGCAGAGAATACAGCAACGCTACCAGGATGCACCTCTGGATGACCAAGAAACAACGATAGAAGCAAGCACAGGCAGAGTCTTTGATAGTCAAGGTGTCGTGACTTCTAATCCGCTTCCAGTTGTTCATATACCAGCACAGAGAGAACCTGATGACCGCGCGTATCAGCAAACAGTATATCGAAGACCGCCAGCAGTTCAGTTCCGCACTCGGGAATATTTGCGAGATAATCCCGGAGCTGCCGTACCTATAGGTAACCAGCGGCCCTTTCTCCACTACGAATACGAGAAAGTACTGGAGCCTCAATACGATAAGGAGCCAGTCCAGACTCTTCAGAAACCAGAACCGACCGCAGCGTCATATGACACTAGACCTGTGACGCGAATTGTTCCTATACCGGTTGACGAAAGAGGCGTTCCAATACCGGGGTATCAGGCAAGGTTCGCTAACGCGTATAGACCGCAGCCAGCTCTCTTCCAGCCTCGGTATGAGTCCGTAGATGATATGCACAGTATATCAGCACCAGTTAGTACACGGGACTTAAGACGTTTACTGTACATTCTTATTCTGAGGCAGAACCGATTGCAGGCGCTTGTGGACCAAATGATGCCAGGATCTGCGTACCCAATGCCGATCTACAGAGACAGTTATAGATACCAAAATCGTTACGAAGATGATGGATACGATTATAGATACGATCCAAAATATAGGAACGATTACATGCAGCCCATGTATGAAAATCAATATGAGAACCATCGGTACTTGCCTAGAAGGAGGATGTATCCGCGTCCTTATGACACTGCAGGTTCAGCCTCGAACCACATTGAGGAAGTTCCGGAATTCCTGCCACCAGAAGTAAGAGAGGCATTGCTTCTGAAGATGTTGATTTTAGCTATTAGTCCGGATTTCGCGCCGACTCCTGTGCCGCCCACGGAATTGACCACTGCTGCTCCAATGAGAAAACAAGTAAGAAACGTTCAGATACTTGGAGAAGAGGGCCCTATGACTGATAAACAGAGACATTGA
Protein
MMLLLLIACVAVTTAENATKDSTEPPSNTTKEILKASETADASKVEIVKQIRRLNDDGSYTIGYEADDGTFKIESRDVRGNVKGTFGYIDKDGEIKRVTYSSSGESTPIPVTTTTTTTQSSPTMIVRVNKTVSSTTRRPLATVVYPTRSSFTTRGTVIQSIPRRRGSSTRPPNTTESTTEQQNLEDTTSSILNLYKPKVEENIRTRTQILKPMSDILKDDLVTRQTTTKLPQTVKPVYEHVTEKAPESVLKMNTFRRELPSTTTNPHMINLQQSAGDDSTDEYGSQLSLGTIRPLFTTTTPRPRLVPIQSIVAARQRIQQRYQDAPLDDQETTIEASTGRVFDSQGVVTSNPLPVVHIPAQREPDDRAYQQTVYRRPPAVQFRTREYLRDNPGAAVPIGNQRPFLHYEYEKVLEPQYDKEPVQTLQKPEPTAASYDTRPVTRIVPIPVDERGVPIPGYQARFANAYRPQPALFQPRYESVDDMHSISAPVSTRDLRRLLYILILRQNRLQALVDQMMPGSAYPMPIYRDSYRYQNRYEDDGYDYRYDPKYRNDYMQPMYENQYENHRYLPRRRMYPRPYDTAGSASNHIEEVPEFLPPEVREALLLKMLILAISPDFAPTPVPPTELTTAAPMRKQVRNVQILGEEGPMTDKQRH

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle       

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.994643
 
 
Length:
655
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00477
Exp number, first 60 AAs:
0.00232
Total prob of N-in:
0.00019
outside
1  -  655
 
 

Population Genetic Test Statistics

Pi
135.683932
Theta
161.416332
Tajima's D
-0.48374
CLR
1.116112
CSRT
0.243437828108595
Interpretation
Uncertain
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