Silkworm Genome Informatics Database

Gene

KWMTBOMO06989 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010500

Annotation

cuticular_protein_hypothetical_28_precursor_[Bombyx_mori]

Location

Bomo_Chr12(+):1188982-1193093 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.924

CDS

ATGGTTACAACGAAATATGGCCGGTATTCTAAAGTTAAATGTAAACGAATAAAACTAACAATAGCCATCACTCTCTTACAGGTGCTCTGCGTATTGCTGGCGACAGGGATAGCCGCTGGCGCTCGACCCAGGCCTCGTTTGCAGCAGGTGGAAGACTCTTACGATTATGAGAACCAGGCCCAGGATAGCAGAGCTGGAGGACAGGTGTACCAGCTCGTTCCGGCTGACCAATACGACTCCATATATAGACAGAATGACCGCCAAGATGAGGAGTATGAGCAGAGACCAGTTCAGCGGCTGCCATCCCGGCAGAAGCTTCAGCCCCAACCACAGCAGGAGGGGCCCAAGCAGCCTCCAGTGCAGACTATTAGAAACTATAACAAGGTGAACGACGATGGAAGCTTTACATTCGGTTACGAGGCTGCGGATGGGTCCTTCAAGGAGGAGACCAGAGGTACCGACTGTGTCGTACGCGGAAAGTACGGCTACATTGATCCCGACGGCAACAAACGGGAGTTCACCTACGTCTCTGGTAACCCTTGCGACCCTAACAAGCCAAACGAAGAGGATGAACCCGAAGCTCCAGCACCTGACTCCGCCGAGCGCGACGACGGAGTACCGAACTACCCCACGAGAGTGGCCCCCAGGCCAACAACCCCACGACCCCCCACGACGTTCTTCCAGAATGATTTCAGAGATGCCGACGAAGATGAAGATGATGAGCCCGTGCAGGCCATCCAGCCGGTCAGGCAGAGAGTGGTTCAGCGCCCTGCTTTAAGACGCCCCGCATACCAGCCACAGCCCATCGCTATCACACCACGCCCACTGCCAGTCACTACAGCCCGCGCTCTACCTCCCGCGACCACCTTCAGACCGCAACTGCTTCAAATTACGCCTAAGCCTCAAATACAGTATAGTCCAGAGCCAAACTACTCGCCCTCTCCTTCGCCAATAGCAACCACTGCAAGACCCGGACCTGGACAAATTGATTTTGCAGCTGAATTCGCTAAGTTCCATCGCGAAAATCAGCTGCAAGGAAGCACGAGCGCTACGGCTGCTAGTCCCACTAAAGCAACAGCTGCGTCTCCTTCGCCAAGCGGAAATCCTCTGTATTCCACTGAACTGGTCTACGATCCATCAAGCGGCCAATATAATACACAGCTGTTCCAGACCTTGCCTCAGACTAAAGGAGAGTTGAACTTGAACCTAAGGTTACAGCCATTTGTCGCTCAACAGCAATCTCAGCCACGACCATTCGTACCGTCACCACAGATACCCGCCGTACCCTCCTCACCGGCGTCCAGTGCACCTCTTTACAGACAACAGCTCCAAAATCCTCAAGAAGTATATCAGAGACAACAAGCCGAACAGCAGTTCCAGAACTCGCAGCAATTGTTCGCACAACAGCAACAGCTGCAGCAGAGTCAGTTGCAGAGGGACCGGGCTGCAGCTAGAGCGCAGGCCCAGCGCCTCGCCGCCCAGGGCCAAGCCGCCCCAGCACCTCAGAGAGCCTCACCCGCCCCTCAGTACTACTATGTGGCTCCTCGCGGAGGAGAGTCCGTCTCTTCAGGCCAGATCGACGCTTTTCTTAGAGGACACGGCATCCAGTTCTAA

Protein

MVTTKYGRYSKVKCKRIKLTIAITLLQVLCVLLATGIAAGARPRPRLQQVEDSYDYENQAQDSRAGGQVYQLVPADQYDSIYRQNDRQDEEYEQRPVQRLPSRQKLQPQPQQEGPKQPPVQTIRNYNKVNDDGSFTFGYEAADGSFKEETRGTDCVVRGKYGYIDPDGNKREFTYVSGNPCDPNKPNEEDEPEAPAPDSAERDDGVPNYPTRVAPRPTTPRPPTTFFQNDFRDADEDEDDEPVQAIQPVRQRVVQRPALRRPAYQPQPIAITPRPLPVTTARALPPATTFRPQLLQITPKPQIQYSPEPNYSPSPSPIATTARPGPGQIDFAAEFAKFHRENQLQGSTSATAASPTKATAASPSPSGNPLYSTELVYDPSSGQYNTQLFQTLPQTKGELNLNLRLQPFVAQQQSQPRPFVPSPQIPAVPSSPASSAPLYRQQLQNPQEVYQRQQAEQQFQNSQQLFAQQQQLQQSQLQRDRAAARAQAQRLAAQGQAAPAPQRASPAPQYYYVAPRGGESVSSGQIDAFLRGHGIQF

Uniprot

H9JLU8 C0H6I4 A0A2H1W037 A0A2A4J7R0 A0A2W1BYJ1 A0A194QJ21 + More
A0A0L7LVI4 A0A194QTH3 A0A212FGR8 A0A139WMZ9 A0A2P8Z3X2 A0A067RDR5 N6UBU5 A0A0T6BDW6 A0A084VVG6 A0A182J4R6

Pubmed

19121390 19280704 28756777 26354079 26227816 22118469 + More
18362917 19820115 29403074 24845553 23537049 24438588

EMBL

BABH01005139 BABH01005140 BABH01005141 BABH01005142 BR000493 FAA00495.1 + More
ODYU01005522 SOQ46455.1 NWSH01002587 PCG67909.1 KZ149906 PZC78307.1 KQ458671 KPJ05512.1 JTDY01000049 KOB79181.1 KQ461194 KPJ06846.1 AGBW02008609 OWR52920.1 KQ971312 KYB29284.1 PYGN01000208 PSN51183.1 KK852700 KDR18149.1 APGK01041017 APGK01041018 KB740987 ENN76127.1 LJIG01001459 KRT85481.1 ATLV01017177 KE525157 KFB41960.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000037510 UP000053240 UP000007151 + More
UP000007266 UP000245037 UP000027135 UP000019118 UP000030765 UP000075880

PRIDE

H9JLU8 C0H6I4

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle

ProteinModelPortal

H9JLU8 C0H6I4 A0A2H1W037 A0A2A4J7R0 A0A2W1BYJ1 A0A194QJ21 + More
A0A0L7LVI4 A0A194QTH3 A0A212FGR8 A0A139WMZ9 A0A2P8Z3X2 A0A067RDR5 N6UBU5 A0A0T6BDW6 A0A084VVG6 A0A182J4R6

KEGG

100379468 no KO assigned | (RefSeq) CPH28, BmorCPH28; cuticular protein hypothetical 28

GO

GO:0042302 GO:0016021 GO:0008270 GO:0043085 GO:0005634 GO:0005737 GO:0005515 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

537

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.50729

Exp number, first 60 AAs:

21.50729

Total prob of N-in:

0.99974

POSSIBLE N-term signal

sequence

inside

1 - 18

TMhelix

19 - 41

outside

42 - 537

Pi

221.984132

Theta

239.731489

Tajima's D

-0.257648

CLR

14.201816

CSRT

0.300284985750712

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
27102218	QQIQNPQEVYQR	100.00	3e-10
27102218	VIFNDAKEAEAVEVMQNGK	100.00	0.009
28467696	QNAEPFGEEAIQFTK	100.00	0.009
28467696	RPASNCDPYSVTDAIMR	100.00	0.012
27102218	AGGQVYQIVPADQYDSIYR	100.00	0.014
28467696	PGIATMSIDNMYCTR	100.00	0.014

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics