Silkworm Genome Informatics Database

Gene

KWMTBOMO06980

Pre Gene Modal

BGIBMGA010486

Annotation

PREDICTED:_myosin-2-like_[Amyelois_transitella]

Location

Bomo_Chr12(-):1021592-1023671 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.237

CDS

ATGGCACAGCTCTCGTTAATGGAGCAACAGTTGGTTCAGCGGAAGGACTTGCTATCCACTGTCGAGTCGCAGCTCGCGACGCTGCGTCGAGAGGCTGAAGAAAAGCAGAAAGTGCTAGAGGAAACCTTCCAGAAGCTTGAAATGGAACAACTGGCACGAGAGTGCAGTACTCGGGAATGCTCAGAGCTGAGCGCCCGGGTGAGCATGGCAGCCGCCGAGACTTGCACCCTGAGACGTGTGGTAGAACAGCTGAAGGAACACCTAACGAGATTGGAGCTTGATCTCAAAATGACCCGAGAACAATTGGATTGGTGGCCACGACCTCTAACCAAGATGCTCGGTGTGGCCAGGTCTTGGCTCCGGTGCCCGATGTCGATGCCGGAAGCTCTTCTGTGGTCCATGTTGCCAGCGCGCAGTGGATGCTAA

Protein

MAQLSLMEQQLVQRKDLLSTVESQLATLRREAEEKQKVLEETFQKLEMEQLARECSTRECSELSARVSMAAAETCTLRRVVEQLKEHLTRLELDLKMTREQLDWWPRPLTKMLGVARSWLRCPMSMPEALLWSMLPARSGC

Uniprot

H9JLT4 A0A2H1V0J7 A0A2A4K3T9 A0A2W1BE35 A0A3S2LCM8 A0A2H1VGR4 + More
A0A194QNA6 A0A0K0MWQ1 G7YZ66

Pubmed

19121390 28756777 26354079 26398909 22287009

EMBL

BABH01005122 ODYU01000124 SOQ34370.1 NWSH01000192 PCG78568.1 KZ150222 + More
PZC72095.1 RSAL01000043 RVE50744.1 ODYU01002473 SOQ40007.1 KQ461194 KPJ06839.1 KR153145 AKI28573.1 DQ386162 ABD48915.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053240 UP000204086 UP000185267 + More

PRIDE

H9JLT4

Pfam

PF01464 SLT + More
PF05257 CHAP

Interpro

IPR013491   Caudovirus_tape_meas_N        + More
IPR038765   Papain-like_cys_pep_sf
IPR007921   CHAP_dom
IPR023346   Lysozyme-like_dom_sf
IPR008258   Transglycosylase_SLT_dom_1

SUPFAM

SSF53955 SSF53955 + More
SSF54001 SSF54001

ProteinModelPortal

H9JLT4 A0A2H1V0J7 A0A2A4K3T9 A0A2W1BE35 A0A3S2LCM8 A0A2H1VGR4 + More
A0A194QNA6 A0A0K0MWQ1 G7YZ66

KEGG

101742066 no KO assigned | (RefSeq) uncharacterized LOC101742066

GO

GO:0016021

Length:

141

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00625

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11316

outside

1 - 141

Pi

221.036499

Theta

167.051622

Tajima's D

1.016419

CLR

0.403921

CSRT

0.660816959152042

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics