Gene
KWMTBOMO06979
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like?_partial_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.417
Sequence
CDS
ATGTACGGCACAGATAACGCACATAATGGGGCCGGCGACTCAGATCATGCCGAAGCCCTCGCCGCCCTCGTTGATGGCCCAGAGCAGCGCGCGCACCAGCTGCTCGTAGGAGTCGTAGTGCGGCAGACAGAGCTGGTTGAAGCACGTGTGCGCCGTGGGCAGCGCGCCGCTCGTGGGCGCCGGGGACAGCTGGAAGCGAGGGTTCAGCTCCTGGAACCGGCCGCCATCACATCAACAGGAGTTTTGATAGCATCCGGCCTGCGAGCAGCCGGTGGTGAACTGCAGCAGGCGGGCGCGCTCCTCGGTGCTGAAGTTGCTGAGCGCGGCCCAGAACCAGCCCACCAGCCGCTCCCAGTCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCACCCCCGCCCCACACCCCGCGCCCCGCGCCCCACGCCCCACATCCCCGCCCCGCGCCGCACACCAGCGCGTGCGCCCGCCAGTCCGCCGCGCACGCCTCGCCCGTGCCGCACACCAGCAGCTGCACAAGCGCGCCGTCAGCCTCGCCGCGTGCCCCCGCGCCCCGCTCCCCGCGCCTCGCTCCCCCACCCCGCGCCCCGCTCACCTCGAGTTCGTTCTCGTCGAAGATGGCGAGCAGATTGTCGGGCACGAGCAGCGTGAGGCCGCGCAGGAAGGCGTCGGTCTCTGCGCGCGTGCGGGCCGCCAGCCGCCGCTGCGCCACCAGGTCCAGTAAATCCGAAACAAGATCTGTCATAAAGAATCTTGACCCTAATAAATCACCAGGATATGATCTAATAACAGCAACTATTTTAAAAGAGCTACCTCAAGAGGGAATTACTTTCTTGACCCAATTATACAATGCTATTTTCAGACTTAAGTTTGTGCCTCACTTATGGAAGGTAGCTCAAATTAAGATGATACCTAAACCTGGAAAAACTGGCGAGGACGTGAAATCTTATCGTCCTATCAGTTTGCTCCCTGTACCGTCCAAGATCATCAGTTTGGCTTTAGACGGAAACATAGTAGAAACTGATGGTACGATAATGGGAACTTTTGCTGATGACACCGCAATAATGACCATGGACGATGATCCAAACGAAGCTTCTTATAAACTACAGAACAGCCTTAATAATATCAACACTTGGCTAAAAAAATGGCGCATCAAAGCGAATGAATCTAAGTCTGTACAAGTTACTTTCACCACTCGAAGACAAACTTGTCCTGCAGTCACCTTGAATAATATAGAGATCCCGCAATCTGAAAATGCAAAGTACTTAGGGATGTACCTGGATAGGAGACTGACTTGGAGAAAACATATATTCACCAAGCGTCTTGCGGTGGGTCAGCAAATACGTAAATTGTATTGGCTTCTTAATAGAAAGTCTCAACTGTCAGTTGAAAACAAGCTTTTACTATACAAATCTGTTATTAAACCCATTTGGTCATATGGCATCCAATTGTGGGGTACTGCGTCAAACTCAAATATTGAAATCCTTCAAAGATTTCAATCAAAAACGCTCAGGATGATAGTGAACGCACCATGGTATGTTGCAAATGAAAGAATCCATTATGATCTTGCCATAAGAAAAGTCAAACATGAAGTAATCCATCGAGCTAAAGCATATTGTGTAAGATTGGAAGCCCAACCGAATAACCTTGCTAAGCATTTAATGGACAACCTAATGACTACAAGAAGACTCAGAAGAAGAGTGCCTCAAGATCTACTAGATCTACTGTAG
Protein
MYGTDNAHNGAGDSDHAEALAALVDGPEQRAHQLLVGVVVRQTELVEARVRRGQRAARGRRGQLEARVQLLEPAAITSTGVLIASGLRAAGGELQQAGALLGAEVAERGPEPAHQPLPVPPRAAHQRVRPPVRRARLARAAHQQLHKRAVSLAACPRAPHPRPTPRAPRPTPHIPAPRRTPARAPASPPRTPRPCRTPAAAQARRQPRRVPPRPAPPPHTPRPAPHAPHPRPAPHTSACARQSAAHASPVPHTSSCTSAPSASPRAPAPRTPAPHPAPRAPRPTSPPRAAHQRVRPPVRRARLARAAHQQLHKRAVSLAACPRAPHPRPTPRAPRPTPHIPAPRRTPARAPASPPRTPRPCRTPAAAQARRQPRRVPPRPAPPPHTPRPAPHAPHPRPAPHTSACARQSAAHASPVPHTSSCTSAPSASPRAPAPRTPAPHPAPRAPRPTSPPRAAHQRVRPPVRRARLARAAHQQLHKRAVSLAACPRAPHPRPTPRAPRPTPHIPAPRRTPARAPASPPRTPRPCRTPAAAQARRQPRRVPPRPAPPPHTPRPAPHAPHPRPAPHTSACARQSAAHASPVPHTSSCTSAPSASPRAPAPRSPRLAPPPRAPLTSSSFSSKMASRLSGTSSVRPRRKASVSARVRAASRRCATRSSKSETRSVIKNLDPNKSPGYDLITATILKELPQEGITFLTQLYNAIFRLKFVPHLWKVAQIKMIPKPGKTGEDVKSYRPISLLPVPSKIISLALDGNIVETDGTIMGTFADDTAIMTMDDDPNEASYKLQNSLNNINTWLKKWRIKANESKSVQVTFTTRRQTCPAVTLNNIEIPQSENAKYLGMYLDRRLTWRKHIFTKRLAVGQQIRKLYWLLNRKSQLSVENKLLLYKSVIKPIWSYGIQLWGTASNSNIEILQRFQSKTLRMIVNAPWYVANERIHYDLAIRKVKHEVIHRAKAYCVRLEAQPNNLAKHLMDNLMTTRRLRRRVPQDLLDLL
Summary
Uniprot
ProteinModelPortal
Ontologies
KEGG
GO
Topology
Length:
992
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.375600000000001
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.01633
outside
1 - 992
Population Genetic Test Statistics
Pi
282.071388
Theta
154.600837
Tajima's D
0.72733
CLR
0.399719
CSRT
0.583070846457677
Interpretation
Uncertain
