SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06976  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008825
Annotation
PREDICTED:_importin-13_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 1.753
 

Sequence

CDS
ATGGATGCTCCTTCAATGGACACTGTTTACCAGGCGATCAGCGCTCTGTACGATGGCCCAAATGGAAATGAAATTGAGAAGGCTTCGCTATGGCTCGCCGATGTACAGAAATCCATCCACTCATGGAAGATTGCCGACGAGTTGTTGCAGCAAAAAAAGGACTTCAATTCCTGTTATTTCGCGGCACAAACGATGAGAGCGAAAATTCAGCACAACCTTTCAGAGCTACCAGCAGAATCTCATGTACCACTTCGTGACACTCTGATAGCTCACCTGGAGCGCACGACTCCGGACACCACATCTTCAATTCTCACGCAGCTTAGCTTGGCATTGGCGGATCTTGCCCTCCAAATGCCATCTTGGCAAGACTGCATAAGTGACCTCATAAAATTATTTTCAAACAAAGAATATCTACTATTGGAGATTTTGACATTACTACCTCAGGAAATTGACTCTTCGAATTTAAAATTGGGTGAAAATCGCAGAGAAGACATAAAATCCCAACTACGTTTGAATTCACAGACAGTAATGTTATTTCTTAAGCAATGTCTGAATAATTCACAAGGCAGTACAAATGTGGGCTTAAAATCTATAAAGTGCATGACATCATGGCTGCAAGTCCGAGCCGTGAACTTACATGAGATACCCCAGAACACTGTCATAGGATATAGTTTACAAGTTTTGAGAGACCACAATTCTATCAACACATTGCATGATGCTTCTTCTGATTGTATATGTGCACTATTACAATGCTTGGAAGAAGTTAATGACCATGAAAATATAGACAGATTGCTATTTGACAGTGTGGTGGCATTAGAAGAAAGCTACCACTTGGCTGTTGCTCATGAGGAAGAGGAAAAAGTGTCCAATTACGCCAGAGTGTTCACAGAACTAGCTGAATCATTTCTGATGAAAATAATTGATTGTACTGATAATGGGAATACACATTTTGCAATGAAATCATTAGAATTAGCTTTAGTTTGTGTTGGATATCATGACTATGAGGTGGCAGAAATAACATTTAATTTATGGTACAGATTATCAGAGGAAGTGTACAGGAGAGATCACCAACCATTAACAGATGCATTTAAACCTCATATAGAGAGGTTGATCGAAGCTTTGGCAAGGCATTGTCAATGTGAACCTGACTTGACACAATTGCCCGACGAAACTGATGATTTTTATGAATTCCGTCAAAAAGTGATGAGTCTGATCAAGGATGTGGTGTTCATAGTGGGATCAAGTTCAGTTTTCAGACAAATGTTTGCTGCATTACAATCTAACATTTCATGGGAACAGACAGAAGCTGCTCTCTTTGTTATGCAATCTGTTGCTAGAAATATCTTACCGGATGAATACGAATACGTGCCGAAGGTGGTGGAAGCGATACTGTCGATGCCCTCCAGCAGCCACCTGGGCGTGCGCGCCACGTGCATCCTGCTGCTGGGCGAGCTGGCGGACTGGGTGGAGCGGCACGCGGCGTCGTGCCTGGCGCCCTGCGTGGCCATGCTGCTGGCCGCCCTGCCGCAGCCCCGGCTGGCGCTGCCCGCCGCCACCGCGCTGCAGAACATCTGCAAGGCGTGTCCCGGCGGAGCGGCCGAGCACATCGGCAAGCTGCTGGGCGCCGTGCAGGCGCTGGACCAGCTCGCCGCGCCGCCGCCCGCCGCCGCCGCGCTCATGCGGGCCGTCGCGCCCGTCGTGGCCAGCCTGCCGCCCGACCAGATGAGCGCAGCCCTCTGCGAAGCGTCAGCCCCCCAACTGGAGGGTCTCCGTCGGCTGTGCTCGGCTCGGCAGCCCATCAAGCGCGGCACCACGTCGGACCCCGTGCTGTACCTCGACCGGCTCGCCGCGCTGTACCGCGACCTCACGCTCTCCGCCGACCTCAAAAACGTCGCGGCGTCCGAAACGCACCCGTGTCTGCCGGCGCTCACCGAGGCGTGGCCCGTGCTCATCGACGTCATGGACAAGTTCGGCGGCGAGGAGCGCGTGATGGAGCGCGTGTGCCGGGCGGCGCGGTTCGGCGTGCGGGCGGCGCGCGGGGCGGGCGCGGCGCTGCTGCCGGCGCTGTGCGGCGCGCTGGCGCAGCTGTACCCGCGGCACGCGCACTCGTGCGTGCTGTACCTGTGCTCCGTGCTGGTGGACGAGCTGGCGGCGCGGCCGGGCTGCGCGGCGGCGCTGGCGGGGCTGCTGGCCGACCTGCTGCCGCCAGCCTTCGCGCTGCTGCAGCGGGACCACGGCTTCAGGGACCACCCCGACACCGTCGACGATCTGTTCCGGCTCTTCATCAGGTTCCTGCAGCGCATGCCGGTGCAGCTGCTGTCGTGCGGCGTGATGGGCAGCATCCTGCAGTGCGCGTGCTCCGCCGCCGCGCTCGACCACCGCGACGCCAGCGCCTCGCTCATGAACTTCCTCGCGGACTTCGCGCGCCTCGCCAACACCGCGCACCCCGACACCGCCGAGGCGCAGCACGCCAAGGCGCTGGCCGAGGAGCTGGTGGTGACGTACGGCGGCGCGCTGACGGCGGCCGTGCTGGAGGCCAGCGTGCTGCACCTGCACCGCGGGCTCGTGCCCGGCGCCGCCGACGTGCTGCTGGAGCTGGCGCGCGCGGAGAGACGGCACGGCGCCGCGTGGCTGGGGGCCGCCGTGCGCCAGCTGCCCGCGCGCCACACCGCCGCCGCCACGCTGCTGCAGGCGCAGCACTTCCACAACACGGCGCGCAGGTCGGTCCCCCGCAGCGCGTTCGTGCCAAACTTCTTTAGAATCGTTGTGATTATAAACTCGATGTAA
Protein
MDAPSMDTVYQAISALYDGPNGNEIEKASLWLADVQKSIHSWKIADELLQQKKDFNSCYFAAQTMRAKIQHNLSELPAESHVPLRDTLIAHLERTTPDTTSSILTQLSLALADLALQMPSWQDCISDLIKLFSNKEYLLLEILTLLPQEIDSSNLKLGENRREDIKSQLRLNSQTVMLFLKQCLNNSQGSTNVGLKSIKCMTSWLQVRAVNLHEIPQNTVIGYSLQVLRDHNSINTLHDASSDCICALLQCLEEVNDHENIDRLLFDSVVALEESYHLAVAHEEEEKVSNYARVFTELAESFLMKIIDCTDNGNTHFAMKSLELALVCVGYHDYEVAEITFNLWYRLSEEVYRRDHQPLTDAFKPHIERLIEALARHCQCEPDLTQLPDETDDFYEFRQKVMSLIKDVVFIVGSSSVFRQMFAALQSNISWEQTEAALFVMQSVARNILPDEYEYVPKVVEAILSMPSSSHLGVRATCILLLGELADWVERHAASCLAPCVAMLLAALPQPRLALPAATALQNICKACPGGAAEHIGKLLGAVQALDQLAAPPPAAAALMRAVAPVVASLPPDQMSAALCEASAPQLEGLRRLCSARQPIKRGTTSDPVLYLDRLAALYRDLTLSADLKNVAASETHPCLPALTEAWPVLIDVMDKFGGEERVMERVCRAARFGVRAARGAGAALLPALCGALAQLYPRHAHSCVLYLCSVLVDELAARPGCAAALAGLLADLLPPAFALLQRDHGFRDHPDTVDDLFRLFIRFLQRMPVQLLSCGVMGSILQCACSAAALDHRDASASLMNFLADFARLANTAHPDTAEAQHAKALAEELVVTYGGALTAAVLEASVLHLHRGLVPGAADVLLELARAERRHGAAWLGAAVRQLPARHTAAATLLQAQHFHNTARRSVPRSAFVPNFFRIVVIINSM

Summary

EMBL
NWSH01000849    PCG73863.1    KZ150222    PZC72091.1    RSAL01000043    RVE50748.1    + More
AGBW02010785    OWR47750.1    NEVH01005887    PNF38379.1    KK852758    KDR17047.1    GEBQ01011533    JAT28444.1    LJIG01022615    KRT79617.1    GECZ01017059    JAS52710.1    GBBI01003418    JAC15294.1    GBHO01002823    JAG40781.1    GBRD01009972    JAG55852.1    GEDC01024226    GEDC01014005    JAS13072.1    JAS23293.1    GECU01024969    JAS82737.1    ACPB03010532    KQ971338    EFA02119.2    KQ434864    KZC09121.1    GEZM01013329    JAV92653.1    GBYB01012799    JAG82566.1    NNAY01000191    OXU30130.1    KK107419    QOIP01000003    EZA51113.1    RLU25209.1    GL438539    EFN68837.1    GL445827    EFN89047.1    KZ288269    PBC29882.1    DS235494    EEB16071.1    KQ435765    KOX75356.1    KQ978931    KYN27455.1    KQ414613    KOC69056.1    ADTU01003566    ADTU01003567    ADTU01003568    CH477276    EAT45133.1    JXUM01056925    JXUM01056926    JXUM01056927    JXUM01056928    JXUM01056929    KQ561931    KXJ77130.1    JXUM01116950    JXUM01116951    JXUM01116952    JXUM01116953    JXUM01116954    JXUM01116955    KQ566037    KXJ70442.1    AXCM01001356    GDUN01000639    JAN95280.1    GFDL01010734    JAV24311.1    GFDL01010784    JAV24261.1    DS232079    EDS34143.1    KQ976735    KYM76136.1    KQ981204    KYN44919.1    GEFM01004465    GEGO01002042    JAP71331.1    JAR93362.1    KQ417611    KOF91139.1    PZQS01000006    PVD28826.1    JRES01000438    KNC31193.1    AAAB01008888    EAL40594.1    GDHF01023540    JAI28774.1    GBXI01016866    JAC97425.1    GFDL01010744    JAV24301.1    GFDL01010867    JAV24178.1    AXCN02000136    CH963920    EDW77584.1    ATLV01018466    KE525234    KFB43136.1    CH379061    EAL33057.2    CH479189    EDW25407.1    APCN01005522    OUUW01000006    SPP81850.1    ADMH02000418    ETN66595.1    KB632261    ERL90864.1    CH916368    EDW03311.1    GGFJ01001608    MBW50749.1    GGLE01006756    MBY10882.1    GGFK01004182    MBW37503.1    CM002910    KMY87728.1    GFJQ02001806    JAW05164.1    CH954177    EDV57517.1    CH902652    EDV33625.1    CH480820    EDW54042.1    CM000157    EDW87433.1    JH429636    CCAG010010711    CH940649    EDW64273.1    AE014134    AY095186    AAF51214.2    AAM12279.1    AGB92498.1    CH933807    EDW12815.1   
Pfam
PF08389   Xpo1        + More
PF03810   IBN_N
PF05175   MTS
Interpro
IPR013598   Exportin-1/Importin-b-like        + More
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR001494   Importin-beta_N       
IPR038538   MTERF_sf       
IPR003690   MTERF       
IPR029063   SAM-dependent_MTases       
IPR002052   DNA_methylase_N6_adenine_CS       
IPR007848   Small_mtfrase_dom       
IPR004557   PrmC-related       
SUPFAM
SSF48371   SSF48371        + More
SSF53335   SSF53335       
Gene 3D
PDB
4C0P     E-value=2.96113e-154,     Score=1402

Ontologies

Topology

Subcellular location
Nucleus  
Length:
928
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.09183
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00030
outside
1  -  928
 
 

Population Genetic Test Statistics

Pi
258.226268
Theta
211.914839
Tajima's D
0.846024
CLR
0.263454
CSRT
0.612619369031548
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 RVQVSGTEPGPALQALGAPRGHQGGALRATRALRVRNVRDDTRKRRRRVFGRALIEIRRYLYSSSKCLKINHVCKSARVFINH 98.25 1e-11
25044914 ACPDWYGCNIR 100.00 0.010
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