Gene

KWMTBOMO06974  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010487

Annotation

ribosomal_protein_L36A_[Bombyx_mori]

Location

Bomo_Chr12(-):939129-940141      View in EpiBrowser

Full name

60S ribosomal protein L44      

Location in the cell

Cytoplasmic   Reliability : 1.689 Nuclear   Reliability : 2.343

CDS

ATGGTGAACGTACCAAAACAGCGCAGGACGTACTGCAAAAAATGTAAATGCCACAAAGTACACAAGGTATCACAGTACAAAAAGTCCAAGGAAAGGCACGCTGCCCAGGGTAGAAGACGTTATGATCGTAAACAGCAGGGTTACGGTGGTCAGTCCAAACCCATCTTCAAAAAGAAGGCAAAAACCACTAAGAAAATTGTGCTCCGTCTTGAGTGTGCCGATTGCAAGGTGAGATCACAGGTTGCATTGAAGAGATGCAAGCACTTTGAGCTCGGTGGTGACAAGAAGAGAAAGGGACAGATGATCCAATTTTAA

Protein

MVNVPKQRRTYCKKCKCHKVHKVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKKAKTTKKIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF

Similarity

Belongs to the eukaryotic ribosomal protein eL42 family.

Keywords

Ribonucleoprotein   Ribosomal protein  

Feature

chain  60S ribosomal protein L44

Uniprot

Q6F481   A0A2W1B8J8   A0A2A4JPD4   A0A0K8T962   Q962S1   Q7KF88   + More
G0ZEF0   E7DZ32   D1LYL1   S4PS40   Q5UAQ1   A0A1E1WUP0   Q5MGL8   I4DM26   A0A194QMR9   I4DIS1   A0A0L7L8H9   A0A1B6L9S6   A0A0A9Z1T3   N6TFA7   A0A2R7W4G7   A0A069DNX9   G8JKF1   A0A1B6GCB0   A0A1B6DGC9   Q4GX65   A0A0P4VMD2   G1K0C1   D1M811   Q4GX66   Q4GX67   Q4GX71   A0A164WXF3   E9GXI8   A0A0P5NPP6   J3JWU6   A0A0P5TEV5   Q4GX69   A0A0J7KSF5   E2ACK4   U4U6C7   A0A067R4E5   A0A158NXV1   A0A0P5XSS2   A0A0P6IMV4   A0A0V0G3J4   Q4GX72   Q4GX70   D2A1Y7   V9ILE4   A0A087ZYP6   A0A0P4YVS5   A0A0P5DEJ7   A0A0P5IYB5   A0A0P6GVQ2   A0A0P6A3F8   Q4GX68   E0W3A9   T1GEW8   A0A1W4WXZ8   A0A0P5GGQ4   A0A026W692   A0A0P4YH05   A0A3L8DW52   A0A0P6D089   A0A0P5APB4   A0A182J3A1   A0A1D1ZKV0   A0A158NXV0   A0A2A3EDU7   A0A2P8ZL48   A0A1L8DSE3   A0A2H8TG78   C4WUD6   A0A1B0D736   A0A1Q3G2C7   B0WRL5   Q1HRN0   K7IQL7   A0A182NSM0   T1D5I1   Q9NB33   B4KEC0   A0A1B0EWU2   A0A182VNG0   A0A182TNG7   A0A182WVW9   A0NDJ1   A0A182HZ69   A0A1A9V6V9   A0A1B0BWD0   A0A1B0A5Y6   W8BVG8   A0A0K8ULV6   A0A034WMX5   A0A0A1XFV6   A0A1A9WDM2   A0A1Y1JX48   A0A1D2MK19   A0A2S2QDW4  

Pubmed

28756777    14668217    23622113    19121390    16023793    22651552    + More
26354079    26227816    25401762    26823975    23537049    26334808    22679863    27129103    21736942    21292972    22516182    20798317    24845553    21347285    18362917    19820115    20566863    24508170    30249741    29403074    17204158    17510324    20075255    24330624    11328654    17994087    12364791    14747013    17210077    24495485    25348373    25830018    28004739    27289101   

EMBL

AB180409    BAD26653.1    KZ150222    PZC72089.1    NWSH01000849    PCG73861.1    + More
GBRD01003739    JAG62082.1    AF514333    AAM53948.1    AF400205    ODYU01008383    AAK92177.1    SOQ51929.1    JF265028    AEL28859.1    HQ424735    ADT80679.1    GU084285    ACY95318.1    GAIX01014198    JAA78362.1    BABH01005120    BABH01005121    AY769307    AAV34849.1    GDQN01000311    JAT90743.1    AY829768    AAV91382.1    AK402344    BAM18966.1    KQ461194    KPJ06833.1    AK401189    BAM17811.1    JTDY01002245    KOB71812.1    GEBQ01019530    JAT20447.1    GBHO01006301    GBRD01018154    GDHC01020963    JAG37303.1    JAG47673.1    JAP97665.1    APGK01030195    KB740761    ENN79044.1    KK854320    PTY14606.1    GBGD01003582    JAC85307.1    JP593080    AER92465.1    GECZ01009836    JAS59933.1    GEDC01025633    GEDC01012549    JAS11665.1    JAS24749.1    AM049158    CAJ17458.1    GDKW01000908    JAI55687.1    ACPB03020164    JO495002    GAHY01000940    AEL79232.1    JAA76570.1    GU120435    ACY71285.1    AM049157    CAJ17457.1    AM049156    CAJ17456.1    AM049152    CAJ17452.1    LRGB01001036    KZS13670.1    GL732573    EFX75660.1    GDIQ01149649    JAL02077.1    BT127714    AEE62676.1    GDIP01127813    JAL75901.1    AM049154    CAJ17454.1    LBMM01003604    KMQ93332.1    GL438539    EFN68839.1    KB631708    ERL85510.1    KK852758    KDR17049.1    ADTU01003568    GDIP01067873    JAM35842.1    GDIQ01002616    JAN92121.1    GECL01003482    JAP02642.1    AM049151    CAJ17451.1    AM049153    CAJ17453.1    KQ971338    EFA02145.1    JR050533    AEY61301.1    GDIP01222955    JAJ00447.1    GDIP01157357    JAJ66045.1    GDIQ01207727    JAK43998.1    GDIQ01028539    JAN66198.1    GDIP01035178    JAM68537.1    AM049155    CAJ17455.1    DS235882    EEB20115.1    CAQQ02157785    GDIQ01247018    JAK04707.1    KK107419    EZA51111.1    GDIP01227805    JAI95596.1    QOIP01000003    RLU24671.1    GDIQ01084920    JAN09817.1    GDIP01196006    JAJ27396.1    GDJX01000447    JAT67489.1    KZ288269    PBC29880.1    PYGN01000025    PSN57228.1    GFDF01004787    JAV09297.1    GFXV01001318    MBW13123.1    ABLF02026135    AK341021    BAH71506.1    AJVK01026617    GFDL01001114    JAV33931.1    DS232057    EDS33415.1    DQ440064    CH477286    ABF18097.1    EAT44733.1    GALA01000498    JAA94354.1    AF271208    CH933807    EDW12888.2    AJWK01028867    AAAB01008888    EAU76903.2    APCN01005504    JXJN01021707    GAMC01001230    JAC05326.1    GDHF01024984    JAI27330.1    GAKP01002036    JAC56916.1    GBXI01004904    JAD09388.1    GEZM01098418    JAV53892.1    LJIJ01001041    ODM93242.1    GGMS01006169    MBY75372.1   

Proteomes

UP000218220    UP000005204    UP000053240    UP000037510    UP000019118    UP000015103    + More
UP000076858    UP000000305    UP000036403    UP000000311    UP000030742    UP000027135    UP000005205    UP000007266    UP000005203    UP000009046    UP000015102    UP000192223    UP000053097    UP000279307    UP000075880    UP000242457    UP000245037    UP000007819    UP000092462    UP000002320    UP000008820    UP000002358    UP000075884    UP000009192    UP000092461    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000078200    UP000092460    UP000092445    UP000091820    UP000094527   

PRIDE

Q5UAQ1    Q9NB33   

Pfam

PF00935   Ribosomal_L44

Interpro

IPR011332   Ribosomal_zn-bd        + More
IPR000552   Ribosomal_L44e       

SUPFAM

SSF57829   SSF57829       

ProteinModelPortal

Q6F481   A0A2W1B8J8   A0A2A4JPD4   A0A0K8T962   Q962S1   Q7KF88   + More
G0ZEF0   E7DZ32   D1LYL1   S4PS40   Q5UAQ1   A0A1E1WUP0   Q5MGL8   I4DM26   A0A194QMR9   I4DIS1   A0A0L7L8H9   A0A1B6L9S6   A0A0A9Z1T3   N6TFA7   A0A2R7W4G7   A0A069DNX9   G8JKF1   A0A1B6GCB0   A0A1B6DGC9   Q4GX65   A0A0P4VMD2   G1K0C1   D1M811   Q4GX66   Q4GX67   Q4GX71   A0A164WXF3   E9GXI8   A0A0P5NPP6   J3JWU6   A0A0P5TEV5   Q4GX69   A0A0J7KSF5   E2ACK4   U4U6C7   A0A067R4E5   A0A158NXV1   A0A0P5XSS2   A0A0P6IMV4   A0A0V0G3J4   Q4GX72   Q4GX70   D2A1Y7   V9ILE4   A0A087ZYP6   A0A0P4YVS5   A0A0P5DEJ7   A0A0P5IYB5   A0A0P6GVQ2   A0A0P6A3F8   Q4GX68   E0W3A9   T1GEW8   A0A1W4WXZ8   A0A0P5GGQ4   A0A026W692   A0A0P4YH05   A0A3L8DW52   A0A0P6D089   A0A0P5APB4   A0A182J3A1   A0A1D1ZKV0   A0A158NXV0   A0A2A3EDU7   A0A2P8ZL48   A0A1L8DSE3   A0A2H8TG78   C4WUD6   A0A1B0D736   A0A1Q3G2C7   B0WRL5   Q1HRN0   K7IQL7   A0A182NSM0   T1D5I1   Q9NB33   B4KEC0   A0A1B0EWU2   A0A182VNG0   A0A182TNG7   A0A182WVW9   A0NDJ1   A0A182HZ69   A0A1A9V6V9   A0A1B0BWD0   A0A1B0A5Y6   W8BVG8   A0A0K8ULV6   A0A034WMX5   A0A0A1XFV6   A0A1A9WDM2   A0A1Y1JX48   A0A1D2MK19   A0A2S2QDW4  

PDB

4V6W     E-value=2.31415e-21,     Score=245

KEGG

778454    K02929 large subunit ribosomal protein L44e | (RefSeq) RpL36A; ribosomal protein L36A

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0003735   GO:0006412   GO:0005840   GO:0022625   GO:0016021   GO:0005622   GO:0006886   GO:0004317   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR10369  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.78584

inside

1  -  104

 

 

Pi

164.925651

Theta

182.483399

Tajima's D

-0.30274

CLR

38.408775

CSRT

0.289685515724214

Interpretation

Uncertain