SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06969
Pre Gene Modal
BGIBMGA010490
Annotation
putative_Forkhead_box_protein_E1_[Operophtera_brumata]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.778
 

Sequence

CDS
ATGAGTCCTCCGCACAGCTTCGCGATCCGCGACATCCTCCCGGAGGCCTTGTCGCGCTCGCCCTCGCCCTCCGACGCCGAGCTCGACGTCACGGGCACCGAGACGCCGCCGCCCTGTGCCTCGACATCGAACGAAAACAAGAAAAACGAAAAACCGGCCTACAGCTACAACGCACTCATCATGATGGCCATCCGCAGCAGCCCCGAGAAACGACTCACTCTCAACGGTATCTACGAGTACATCATGAAAAATTTCCCGTATTACAAAGAGAACAAACAAGGTTGGCAAAATTCTATACGTCACAATTTGAGTTTGAACAAGTGCTTCGTGAAAGTGCCGCGCCACTACGACGACCCCGGTAAGGGGAACTACTGGATGCTGGATCCATCTTCGGATGACGTGTTCATCGGCGGCACGACGGGCAAGTTACGAAGGAGGTCGACGGCCGCGTCCAGGTCGCGACTGGCCGCGTTCAAACGTGGCGCGCTGCTGCACCCGATGTTCGGGAATCCTTACGCGTCGTTGGTCGGTCTGTACCCGCCGCTGCTGTCGGTGTACGGGCGGTACGCGCTCCCGAGTCCTCTGCTGAGGCTGCCGCCGCCGCCGCCCAGCCCGTACCACCAGCTGTACCGACGGCTGCACGGACTGGCGGCCCCGACCAGCCCGCCGCCGGAGCCCGACCACCTCGTCAAGCACAGTTGA
Protein
MSPPHSFAIRDILPEALSRSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLAAFKRGALLHPMFGNPYASLVGLYPPLLSVYGRYALPSPLLRLPPPPPSPYHQLYRRLHGLAAPTSPPPEPDHLVKHS

Summary

EMBL
BABH01005114    NWSH01000849    PCG73853.1    ODYU01000753    SOQ36014.1    JTDY01000356    + More
KOB77564.1    KZ150222    PZC72083.1    AGBW02010785    OWR47758.1    KQ461194    KPJ06827.1    KQ458671    KPJ05528.1    GBRD01003834    GDHC01022008    JAG61987.1    JAP96620.1    GEDC01012633    JAS24665.1    MH091004    AYR04657.1    KK854498    PTY16378.1    AB510033    BAI94472.1    BABH01038826    KPJ05529.1    KPJ06825.1    KK852886    KDR14383.1    KQ982498    KYQ55657.1    KQ976573    KYM80385.1    ADTU01024129    GL888600    EGI59201.1    KB632390    ERL94519.1    KQ980824    KYN12654.1    KQ977133    KYN05479.1    APGK01045228    KB741032    ENN74760.1    CAQQ02000280    GDIQ01040663    JAN54074.1    GBBI01001983    JAC16729.1    ACPB03020218    KQ434813    KZC06801.1    CVRI01000038    CRK94358.1    CRK94356.1    GDIQ01003972    JAN90765.1    KQ971338    EFA02883.2    ODYU01004751    SOQ44965.1    OWR47760.1    GBYB01009691    JAG79458.1    AJVK01019784    NEVH01027075    PNF13784.1    HQ893677    HQ893678    HQ893679    HQ893680    HQ893681    HQ893682    HQ893683    HQ893684    HQ893687    HQ893688    HQ893689    HQ893690    HQ893691    HQ893692    ADX59629.1    ADX59630.1    ADX59631.1    ADX59632.1    ADX59633.1    ADX59634.1    ADX59635.1    ADX59636.1    ADX59639.1    ADX59640.1    ADX59641.1    ADX59642.1    ADX59643.1    ADX59644.1    HQ881782    HQ881783    HQ881784    HQ881786    HQ881787    HQ881788    HQ881789    HQ881790    HQ881793    HQ881794    HQ881795    HQ881797    HQ881798    HQ881799    HQ881800    HQ881801    HQ881802    HQ881803    HQ881804    HQ881805    HQ881806    HQ881807    HQ881808    HQ881809    HQ881810    HQ881811    HQ881812    HQ881813    HQ881814    ADV57818.1    ADV57819.1    ADV57820.1    ADV57822.1    ADV57823.1    ADV57824.1    ADV57825.1    ADV57826.1    ADV57829.1    ADV57830.1    ADV57831.1    ADV57833.1    ADV57834.1    ADV57835.1    ADV57836.1    ADV57837.1    ADV57838.1    ADV57839.1    ADV57840.1    ADV57841.1    ADV57842.1    ADV57843.1    ADV57844.1    ADV57845.1    ADV57846.1    ADV57847.1    ADV57848.1    ADV57849.1    ADV57850.1    HQ881781    HQ881785    HQ881791    HQ881792    HQ881796    ADV57817.1    ADV57821.1    ADV57827.1    ADV57828.1    ADV57832.1    KQ981280    KYN43359.1    KK107293    QOIP01000005    EZA53389.1    RLU22313.1    LBMM01005097    KMQ91818.1    PYGN01000163    PSN52416.1    DQ414248    ABD63010.2    EFA02881.2    CH477230    EAT46964.1    NWSH01000310    PCG77544.1    KZ150422    NHMN01024376    PZC70930.1    PZC87413.1    JXUM01044275    KQ561394    KXJ78720.1    GL436519    EFN71837.1    DS233988    EDS32512.1    AXCM01003493    AXCN02000832    AAAB01008984    EAA43390.4    ATLV01022560    KE525333    KFB47790.1    JTDY01000220    KOB78225.1    UFQS01002743    UFQT01002743    SSX14608.1    SSX34005.1    ADMH02001051    ETN64308.1    FR904655    CDQ69116.1    GDIQ01050213    JAN44524.1    FR904429    CDQ63135.1    APCN01003775    AYCK01011325   
Pfam
PF00250   Forkhead
Interpro
IPR001766   Fork_head_dom        + More
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR030456   TF_fork_head_CS_2       
IPR018122   TF_fork_head_CS_1       
SUPFAM
SSF46785   SSF46785       
Gene 3D
PDB
1D5V     E-value=9.86792e-31,     Score=330

Ontologies

Topology

Subcellular location
Nucleus  
Length:
233
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.13576
Exp number, first 60 AAs:
0.00039
Total prob of N-in:
0.04951
outside
1  -  233
 
 

Population Genetic Test Statistics

Pi
179.864247
Theta
194.90076
Tajima's D
-0.242816
CLR
0.794491
CSRT
0.303634818259087
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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