Silkworm Genome Informatics Database

Gene

KWMTBOMO06968

Pre Gene Modal

BGIBMGA010297

Annotation

forkfead_transcription_factor_G1_[Bombyx_mori]

Location

Bomo_Chr12(-):757307-758405 View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Nuclear Reliability : 4.513

CDS

ATGAATCATGCAGCCTCCAAGGCCCCGCTCTCTCCGGCGCCTTCCACTGAGGCCTCGCCCTCCGAGACGGACCTCAGCGATTCCGAGCTCGACGTCACCGGAACCGAACCCGTCGACTGCTCCAAGCCCAAGGACGACGACAACGGCGAAAAGAAACACGAGAAGCCAGCGTACAGCTACAACGCTCTCATCATGATGGCGATAAGGAACAGTCCCGAGAAACGACTCACGCTGAACGGCATATATGAATACATCATGACCAACTTCCCGTACTACAGGGAAAACAGACAAGGCTGGCAGAACTCGATCCGACACAACCTGAGCCTCAACAAGTGCTTCGTGAAGGTGCCGCGACACTACGACGACCCCGGCAAGGGCAACTACTGGATGCTGGACGCGTCGGCCGACGACGTGTTTATCGGCGGCACGACCGGGAAGCTGCGGCGGCGGTCCGCGCTGACGGGCCGCGCTCGGCTCGCGTGCTTCAAGCGGCCGCTGTTCCCGGGAGCCGCGCCCTACCCACCCGCCGCCTACTCGCAGCTCGTCGGCCTCTACTCGCAGCTTCTCTACCAGAGGTACGCGCCGATGCAAATGAAGACCATGCCGGTGGCTCCCAGCGCTGTCCATCCCGCATTCCGTGACGCTGTCGGGTACAGCGCGTTGCAGTACTCACCCTCTTTGTATGATCGGATGCCGACGGCGCCATTCCTGGGCCAGGCGTCCCTTCTGGCAAATACCCCACTGGCGCAGCCCCAGCTGCTGACTCCATCGCCACCATCGCTACACTCTCCGCCGACCTCTGGCTCCTCCAGTCCGGAACTGCCCTCGCCGTCTCATCATCCTCTCTCGCCACACATCTACAAGCCGGTGACGGTTCTCACGAGGCAGTGA

Protein

MNHAASKAPLSPAPSTEASPSETDLSDSELDVTGTEPVDCSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRRSALTGRARLACFKRPLFPGAAPYPPAAYSQLVGLYSQLLYQRYAPMQMKTMPVAPSAVHPAFRDAVGYSALQYSPSLYDRMPTAPFLGQASLLANTPLAQPQLLTPSPPSLHSPPTSGSSSPELPSPSHHPLSPHIYKPVTVLTRQ

Uniprot

D4AH70 H9JL96 A0A2H1VVV4 A0A194QPC3 A0A2W1CXS5 A0A2A4K0X9 + More
A0A194QJG3 A0A0L7LRY3 A0A212F1Z1 A0A1A9WDN8

Pubmed

20077574 19121390 26354079 28756777 26227816 22118469 + More

EMBL

AB510033 BAI94472.1 BABH01038826 ODYU01004751 SOQ44965.1 KQ461194 + More
KPJ06825.1 KZ150422 NHMN01024376 PZC70930.1 PZC87413.1 NWSH01000310 PCG77544.1 KQ458671 KPJ05529.1 JTDY01000220 KOB78225.1 AGBW02010785 OWR47760.1

Proteomes

UP000005204 UP000053240 UP000218220 UP000053268 UP000037510 UP000007151 + More
UP000091820

PRIDE

D4AH70 H9JL96

Pfam

PF00250 Forkhead

Interpro

IPR030456   TF_fork_head_CS_2        + More
IPR036390   WH_DNA-bd_sf
IPR036388   WH-like_DNA-bd_sf
IPR001766   Fork_head_dom
IPR018122   TF_fork_head_CS_1

SUPFAM

SSF46785 SSF46785

Gene 3D

1.10.10.10

CDD

cd00059 FH

ProteinModelPortal

D4AH70 H9JL96 A0A2H1VVV4 A0A194QPC3 A0A2W1CXS5 A0A2A4K0X9 + More
A0A194QJG3 A0A0L7LRY3 A0A212F1Z1 A0A1A9WDN8

PDB

1D5V E-value=3.76712e-31, Score=335

KEGG

100384886 K09385 forkhead box protein G | (RefSeq) Foxg1, BmFOXG1; forkfead transcription factor G1

PATHWAY

04068 FoxO signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0003700 GO:0043565 GO:0005634 GO:0006355 GO:0003677 GO:0006886 GO:0004317 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Subcellular location

Nucleus

Length:

296

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.296590000000001

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.03034

outside

1 - 296

Pi

171.477655

Theta

160.402425

Tajima's D

-1.026328

CLR

99.709343

CSRT

0.129743512824359

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree