The Silkworm Genome Information Database

Gene

KWMTBOMO06964

Pre Gene Modal

BGIBMGA010298

Annotation

PREDICTED:_protein_lethal(2)denticleless_[Papilio_machaon]

Location

Bomo_Chr12(-):664411-669675 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.154

CDS

ATGAATAATATACAAAATTTGATCGATCGTGAACTCGGTCTCCATTGCCGGTTTAATTACGATACGGTACTGAAGCGGCTAGTGGTGAACAGTGAGGAATCGTTTTACGGGCTCCAATCCTCAAATGTTGTAGCAAATTTTGAACAGGATCCTCCGATATTCGCTTGTAGATTTGCTGAAACATCTGGCTATGAACACATACTGGCTCTTGCTAACGAAGATGGAAAGGTTGCTATTCAGGACACATCCACGCAAAAGACAGCAAGTAGATTGGAAGCATTCCAATGTCACAATAATGCTGTATTTGACCTTGCTTGGATGCCCAAAAACATGAATTTTATAACTGTTTCAGGAGACCACACGGCTTGTCTGTGGGATGCAGCAGAAGGTTCACCTAAAAGAGTTCTCGTGTTCTCGAGCCACACGAAGTCTGTTAAAATTGCCGTATTTCGGCCCATGGAGCCGTCGGTGTTCGCCACCGGCGCGAGAGACGGCCACATCCTCATTTGGGACATCCGCGCCTGCAACCAACCCACGCTGGTTTTAAAGCCAGACAACTGCCTCATGAACTGCCACTCTAACTTCGCGCCGAAGACTCCCTCCTCGCACGGCAAGCGACCCCGCATCGACGGCCACCGCGCCGTCAGCATCACCGGGCTCGTGTTCCAGGACGACGACACGCTGCTGTCCTGCGGCGAGTGCGACGGGAACATCAAGGCGTGGGACCTGCGCAAGAACTACAACGTGTACAAGCGGGAGCCGCTCCCCAAGCACTCCATTCCCTACTGCGGCAGCTCCGCCAGGAACGGCTACAGCAACCTCGTCATAGACCACTCCGGCGTGCGCCTCTACGCCAGCTGCATGGACGACGTCATCTACTGCTTCAACCTCGCGGCCTACAACCCGCTGCCCGAGCGCCGCTACGTCGGCCACCACAACGGGACCTTCTACGTCAAGAGCGGGCTCAGCGCCGACGGGGCCTACCTCGTCAGCGGCAGCAGCGACAAGTACGCCTACCTCTGGAACGTCAAGTGGAGCGAGCCCCTGCTGCGCCTCAGCGGACACCGCGCCGAGGTCACCTGCGCCGCGCTGTGCCGCCGCGCGCGCGGACCCCTGCTCGTCACCGCCGGGGACGACGCGCGGCACCTGCTGTGGAGGCTGCACGCCGCGCCCCGCCCCGCCCCGCCCGCCGACGCGCGCGCCGAGCCCGTGCCGCGCCGCGCCCCGCCCGCGCCGCTAGACGCCACGCCGCGCGCCGCCAAGCGCCGCCACCACCCGCCCGCGCGCTCCAAGCGCTGCCTCGCCGACCTCATGCCCGCCGACTCCGAGCCGACTGCGAAGCGACCCAGGACTGACGTGCAGCCCGCCGGGGCCAAGCGCCCACACAACGGCGAACCTGAACCCCCGATTCCAAGCAAGTATCCACGGATTGAAGAGACGACGTCAACGTGGGGAGAAGCCGCCGAGAGCAGGGGTCTGACGACACCCACCAAGAATTACGAGAAAAGAGGTTACAAAACCCGATCCCCCAAGAGTCCCAAGCCGATCTCTCCATCATCAGTCTGCCGGTCCCCAGCTGATGTCGCCCGCCAAGAAACCGGGAACTACAGATTGGCTGACGAAGCTTCGAGAACAAAAAGAGAAAGTGGAACCGGGGGAGGGAGCGTCGGTGCCGCTGAGCCCGAGGGAGCCGCCGCCGCGGAGGAACTCCGGCGCGGAGAGGACGCCCAAATCTGCTAA

Protein

MNNIQNLIDRELGLHCRFNYDTVLKRLVVNSEESFYGLQSSNVVANFEQDPPIFACRFAETSGYEHILALANEDGKVAIQDTSTQKTASRLEAFQCHNNAVFDLAWMPKNMNFITVSGDHTACLWDAAEGSPKRVLVFSSHTKSVKIAVFRPMEPSVFATGARDGHILIWDIRACNQPTLVLKPDNCLMNCHSNFAPKTPSSHGKRPRIDGHRAVSITGLVFQDDDTLLSCGECDGNIKAWDLRKNYNVYKREPLPKHSIPYCGSSARNGYSNLVIDHSGVRLYASCMDDVIYCFNLAAYNPLPERRYVGHHNGTFYVKSGLSADGAYLVSGSSDKYAYLWNVKWSEPLLRLSGHRAEVTCAALCRRARGPLLVTAGDDARHLLWRLHAAPRPAPPADARAEPVPRRAPPAPLDATPRAAKRRHHPPARSKRCLADLMPADSEPTAKRPRTDVQPAGAKRPHNGEPEPPIPSKYPRIEETTSTWGEAAESRGLTTPTKNYEKRGYKTRSPKSPKPISPSSVCRSPADVARQETGNYRLADEASRTKRESGTGGGSVGAAEPEGAAAAEELRRGEDAQIC

Uniprot

A0A212F1Z0 A0A0L7LE62 A0A067QMU1 A0A2J7PMJ9

Pubmed

22118469 26227816 24845553

EMBL

AGBW02010785 OWR47765.1 JTDY01001524 KOB73654.1 KK853239 KDR09520.1 + More
NEVH01023983 PNF17564.1

Proteomes

UP000007151 UP000037510 UP000027135 UP000235965

Pfam

PF00400 WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR017986   WD40_repeat_dom
IPR001680   WD40_repeat
IPR019775   WD40_repeat_CS
IPR036322   WD40_repeat_dom_sf

SUPFAM

SSF50978 SSF50978

Gene 3D

2.130.10.10

ProteinModelPortal

A0A212F1Z0 A0A0L7LE62 A0A067QMU1 A0A2J7PMJ9

PDB

6QDV E-value=1.18151e-13, Score=187

KEGG

101745085 no KO assigned | (RefSeq) protein lethal(2)denticleless

GO

GO:0005515 GO:0006355 GO:0043565 GO:0003677 GO:0006886 GO:0004317 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

579

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0017

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00247

outside

1 - 579

Pi

14.16463

Theta

33.188864

Tajima's D

-1.301849

CLR

37.356114

CSRT

0.0868456577171141

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics