SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06961  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010309
Annotation
PREDICTED:_transmembrane_protein_147_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.585
 

Sequence

CDS
ATGACCCTATATCACTTCGGGAATTGCTTAGCCTTAATATATGCACCTTATCATATGGCTTACAAATATTCTGGGATCTCGGAATATGCTTCGTTTTCTAAGTGCGTGTATGCTGGAGGATTATATATTTTCACTCAACTTTGCAAAATGCTACTGTTAGCAACATTTTTTCCGGACTCTGATAGTAGTCCCGTTGAAGGTGAATATAATGTGATTTTGGAAATACTGAAGTCAACAGTAGATTTTGCTGATCTACTGGGCATATACTTTGCATTAAACTCTGTGCCTGGTAAAGGCCATGCTAAGATCCTTACATCAGCTATTGGATGGGCCAGTGCTGAATTGGTAGTAACACGTACTGTGTTACTCTGGGTGGGAGCAAGAGGCTCGGAATTTGACTGGCGCTATGTCCGTTCCTGTGCCGAATCTAACGTGGCACTGATACAGCACGCTGCCACTGCTACTCTAGTCTGGCTGTGGACAAGAAGTGACTTGCCCAAAAAGCATTCTCCTATTGTTGTCAGCTTGTTAGCTCTCACTCCTTATAGAGCACTAATCGAAGAAGCAATTGGAAGTATATTCCACTTATGTGCATGGGCATTGGTAGCTGTACGAGCTATCCACGCTTCAGCAGTTGGCCTTTCTGCTCTAGCTACTTATGCAATTTTGGCTCAACAGATAGGAATATAA
Protein
MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDSDSSPVEGEYNVILEILKSTVDFADLLGIYFALNSVPGKGHAKILTSAIGWASAELVVTRTVLLWVGARGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALTPYRALIEEAIGSIFHLCAWALVAVRAIHASAVGLSALATYAILAQQIGI

Summary

EMBL
BABH01038807    BABH01038808    BABH01038809    ODYU01013026    SOQ59641.1    KQ458671    + More
KPJ05544.1    NWSH01000848    PCG73864.1    KQ461194    KPJ06815.1    KZ150059    PZC74254.1    GDQN01001769    JAT89285.1    JTDY01000947    KOB75327.1    AGBW02010785    OWR47771.1    GAIX01014228    JAA78332.1    GDQN01005864    JAT85190.1    JR047052    AEY60314.1    KK107151    QOIP01000003    EZA57362.1    RLU24407.1    KZ288292    PBC29198.1    GL449657    EFN82327.1    GL888321    EGI62858.1    KQ982566    KYQ54720.1    ADTU01004174    NNAY01000195    OXU30092.1    GDAI01001129    JAI16474.1    DQ440172    ABF18205.1    GL443287    EFN62215.1    JXUM01089073    KQ563744    KXJ73394.1    JRES01000714    KNC29031.1    JXUM01139649    GAPW01003989    KQ568932    JAC09609.1    KXJ68835.1    GEZM01037116    JAV82159.1    KQ977220    KYN04931.1    GEBQ01010725    GEBQ01003088    JAT29252.1    JAT36889.1    GBHO01007741    GBHO01007740    GBRD01005335    GBRD01005334    GDHC01014000    GDHC01007808    GDHC01007353    JAG35863.1    JAG35864.1    JAG60486.1    JAQ04629.1    JAQ10821.1    JAQ11276.1    KQ981276    KYN43727.1    AXCM01000488    KQ976681    KYM78173.1    GGFM01005291    MBW26042.1    GGFJ01009042    MBW58183.1    AJWK01007998    GGFK01009568    MBW42889.1    ADMH02000444    ETN66457.1    GDKW01001103    JAI55492.1    ACPB03003651    GAHY01000663    JAA76847.1    GECZ01009748    JAS60021.1    GECU01014733    JAS92973.1    GDHF01009262    GDHF01003742    GDHF01002916    JAI43052.1    JAI48572.1    JAI49398.1    RSAL01000043    RVE50760.1    GGFK01009635    MBW42956.1    GFDF01011147    JAV02937.1    AXCN02000633    GBXI01015518    GBXI01009768    JAC98773.1    JAD04524.1    ATLV01014616    KE524975    KFB39238.1    CH916368    EDW03790.1    PYGN01000253    PSN50049.1    CH940649    EDW63906.1    GBBI01000733    JAC17979.1    GBGD01002796    JAC86093.1    GFDF01011146    JAV02938.1    CH933807    EDW11302.1    OUUW01000006    SPP81476.1    CH379059    EAL34195.1    CH479187    EDW39902.1    CP012523    ALC39754.1    GEDC01026698    JAS10600.1    GFTR01003823    JAW12603.1    KQ978566    KYN30090.1    GFDL01002731    JAV32314.1    GBYB01002209    JAG71976.1    AK418055    BAN21270.1    CH963852    EDW75648.1    CH902620    EDV31379.1    KQ971338    EFA02200.1    GADI01003816    JAA69992.1    ABJB010069105    ABJB010344880    ABJB010542942    ABJB010574298    ABJB010589025    ABJB010768691    ABJB011035967    DS756029    EEC08379.1    UFQT01001733    SSX31556.1    GFDG01002177    JAV16622.1    DS235354    EEB15086.1    GBBK01003546    JAC20936.1    GBBL01001815    JAC25505.1    GEFH01000186    JAP68395.1    GFPF01006881    MAA18027.1    GEDV01007701    JAP80856.1    GBBM01002381    JAC33037.1    JO843085    AEO34702.1    APGK01008646    KB737751    ENN82940.1    APGK01022489    KB740426    ENN80680.1   
Pfam
PF09767   DUF2053
Interpro
IPR019164   TMEM147       

Ontologies

Topology

Length:
229
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
50.24512
Exp number, first 60 AAs:
17.94825
Total prob of N-in:
0.39814
POSSIBLE N-term signal
sequence
outside
1  -  229
 
 

Population Genetic Test Statistics

Pi
142.99039
Theta
146.347206
Tajima's D
-1.031094
CLR
1.006489
CSRT
0.131593420328984
Interpretation
Uncertain
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