Gene

KWMTBOMO06959

Annotation

PREDICTED:_uncharacterized_protein_LOC106142604_[Amyelois_transitella]

Location

Bomo_Chr12(+):352636-355500      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.416

CDS

ATGCACCGCGGGCGATTTTTAGTAAATATGGTAAAAAAACTGGAAAAAGAAAATATCGCTCCTCCTATCACTTCTACGCAACATGCAAGCGTGGAAGATGACTTGAAGATAATATCATCAAGTGACGAAGTTTCATCCAATGAAACTCATGCTGTCTTGACACCGGTTAATACATATGTACCTAGCACATCTAAACAACAAAATTCTGTTGCCCCAAACTACTATATTTCACCGATCCGGAGCGATGAAAGTGATATTGACGACTCTGATGAAGATCCTAATTTTCAATTGTTAAACAAAAATGAGCTCCCACCTAAGGTCGTACCTTCATTATCATCGGCGACTTCGTCCAGCACCAGCAGCAGCAACTCGAGTTCGTCGGATACCGAAGATGATAGTAAGCAAGTAGGCCCGGAAAATGTTATGGTTCCTGAATCGTGTATTGAGATCGAAAAAAAGGGCAAAAAGAGAGTACGCAATCCAGCAACGTGGAAGTCGAAAATCGCGAAACAACTGAGAAATTCTGGCAAAGCCTATCAGTCCCTGTCAAAATCTAAGAAACTAATACTAGAAAGAAAGGTTGGACCACCCTGTGGAGACAAATGTCGCCTAAAATGCAAAGATAAAGTGAACGAGATGTCAAGACAACAGGTCTTTGACGCATATTGGGCACTCAGCGATCTTGAAAGGCAAAGAGAATTCATAGTACGCCACTCGCAACAAATAAAGCCTAAATATCGGTACTCAAGTACACAAAATTTTAGAGCTCTCAACAATGCATTTTACTTAGATATTAATGGATCCAAAATAAGAGTATGCAAGCCATTTTTCAAATCCACTCTTGATTTGAGCAATAAAGCGATAAAAACAGCACATTCAAAGAAAACAGAATCAGGTATTATTCAAGCCGATTTTAGAGGAAAACACAATCATCATCCAACTATTGACCCACAAATTAGACAGAGCGTTAAAGATTTTATAAATTCTATTCCCCGGATTGAATCACACTATTTGAGAGCCCAAACAACAAGAGAATTCATAGCAAGTGATAAATCATTAGCAGATATCTACCGAGATTATAAAAAACTTCGTGAAGAGGATGGACTACCGGTTGCCACGTCTTCTACATTCAACAGGATTTTCAATACCGAATTTAACATTTCTTTCTTCGTACCGAAGAAAGATCAATGCGATTTGTGCGAAAGGTACAAGAATTCAAACGAAGAAGAAAAGTGCAAGTTAATCCAGGAATATGAAGAGCATCTAAAAGAAAAAGATTTAGTAAGAACTGAAAAAGAAAATGACAAGAATAGGACAGATGGCACAATCGTAGCAGATTATGACTTACAGGCTGTATTACAGATTCCTAAAGGACAAATATCCTTGTTCTTCTATAAATCTAGGATCAACTGCCTTAATTTTACTATCAGCGATTTAAGGGCAAAAGATGTCATATGCTACTTTTGGGATGAAACAGAGGGAAAGAGAGGAGCTATTGAAATTAGCAGCTGCGTACTTAACTACATTAAATCAAAGATAGACCAAAATCCCAACAAAGAAATTGACGTCATTTTCTATTCGGATAATTGTGGTGGCCAACAAAAAAATAAGTTTCTTTTATCTGCCTATGCCTATGCCGTCAACAAATTGCTAGTTAAGTCTATTACTCACAAGTTTTTAATACGCGGTCATTCACAGAACGAAGGAGATAACGTACATAGTGTGATTGAAAGACAAATAAAAAGATATATGCAGTCGGGCCCAATTTATATACCAGAACAATATAAAACGTTGATTACCACTGCAAAAAAGACTGGAAAACCATACAAAGTTGTTGAAATGACCTACAATCAATTTTATGATGTTAAAGCACTACAGGAATCATGGGGCACGAATTTTAATGTAGATGAAGAAAAAAATCAAATTAAGTGGCATGACATTAAGGTACTCAGAGTTGAAAAAGAACACCCTGATACATTTTTCTATAAAACATCATTTGCTGAAGAAGCTTATAGAAAAGTGTGTGTGAAAAAGAGGGCTTTCCGTACAAGAGGAACTGGGGTAGCCATAAATCAGACGACATTTTCAATTGGATTAACACAAGCCTACAATGAAAAAATTGCATTATCAGATGCAAAACAAAAAGACATTCAAGATTTGATTGATAAGAATGTAATTCCAAAATCTTATTATGATCTCTATTATAAGAATATTCTTGGCAGTAATAAAAATTAA

Protein

MHRGRFLVNMVKKLEKENIAPPITSTQHASVEDDLKIISSSDEVSSNETHAVLTPVNTYVPSTSKQQNSVAPNYYISPIRSDESDIDDSDEDPNFQLLNKNELPPKVVPSLSSATSSSTSSSNSSSSDTEDDSKQVGPENVMVPESCIEIEKKGKKRVRNPATWKSKIAKQLRNSGKAYQSLSKSKKLILERKVGPPCGDKCRLKCKDKVNEMSRQQVFDAYWALSDLERQREFIVRHSQQIKPKYRYSSTQNFRALNNAFYLDINGSKIRVCKPFFKSTLDLSNKAIKTAHSKKTESGIIQADFRGKHNHHPTIDPQIRQSVKDFINSIPRIESHYLRAQTTREFIASDKSLADIYRDYKKLREEDGLPVATSSTFNRIFNTEFNISFFVPKKDQCDLCERYKNSNEEEKCKLIQEYEEHLKEKDLVRTEKENDKNRTDGTIVADYDLQAVLQIPKGQISLFFYKSRINCLNFTISDLRAKDVICYFWDETEGKRGAIEISSCVLNYIKSKIDQNPNKEIDVIFYSDNCGGQQKNKFLLSAYAYAVNKLLVKSITHKFLIRGHSQNEGDNVHSVIERQIKRYMQSGPIYIPEQYKTLITTAKKTGKPYKVVEMTYNQFYDVKALQESWGTNFNVDEEKNQIKWHDIKVLRVEKEHPDTFFYKTSFAEEAYRKVCVKKRAFRTRGTGVAINQTTFSIGLTQAYNEKIALSDAKQKDIQDLIDKNVIPKSYYDLYYKNILGSNKN

Uniprot

J9LYS5   J9LMT7   A0A2S2NW59   A0A2H1WUL7   J9KBE8   A0A2W1C4W6   + More
A0A026WEZ7   T1HH44   A0A2H1X0U8   A0A3S2LBW7   A0A0A9VZA8   J9KD89   H9JF09   J9LN28   J9LH36   J9LBW7   A0A0A1XB56   A0A3S2M8H5   J9M4G9   A0A2R7WJY1   X1WUB1   J9KUZ7   J9L9L9   W4XW95   W4ZD48   A0A3S2P4C8   A0A3S2N704   W4YFK8   J9KRP2   J9M3G1   J9KUZ8   A0A336L7N8   W4XFL6   A0A1Y1MM80   A0A1Y1N893   J9M2W1   W4XFL7   J9LAK0   A0A3S2TF04   A0A1Y1LHW9   X1X3M6   H9JMR7   A0A2S2NVW0   J9KUE4   A0A3S1ATS4   A0A224X9R1   X1XHP1   S4PHD9   A0A3N0YTD4   J9LBJ2   V4ABT9   J9LY49   A0A2P8ZEQ7   A0A2P8XZ32   A0A1W7R683   A0A2P8YMK7   J9M8J2  

Pubmed

28756777    24508170    25401762    19121390    25830018    28004739    + More
23622113    23254933    29403074   

EMBL

ABLF02009837    ABLF02009842    ABLF02010195    ABLF02010196    ABLF02055224    GGMR01008791    + More
MBY21410.1    ODYU01011180    SOQ56761.1    ABLF02009832    ABLF02009835    KZ150145    PZC72904.1    KK107242    EZA54533.1    ACPB03016567    ACPB03016568    ODYU01012570    SOQ58975.1    RSAL01000260    RVE43346.1    GBHO01042097    JAG01507.1    ABLF02013766    BABH01033861    ABLF02003967    ABLF02023797    ABLF02019640    ABLF02019643    ABLF02019649    GBXI01005713    JAD08579.1    RSAL01000009    RVE53882.1    ABLF02022524    KK854960    PTY19956.1    ABLF02037175    ABLF02037177    ABLF02033230    ABLF02004635    AAGJ04159061    AAGJ04019135    AAGJ04019136    AAGJ04019137    RSAL01000569    RVE41377.1    RSAL01005524    RVE40000.1    AAGJ04087115    ABLF02013311    ABLF02006166    ABLF02026282    ABLF02010095    UFQS01001897    UFQT01001897    SSX12663.1    SSX32106.1    AAGJ04162991    GEZM01027265    JAV86789.1    GEZM01010383    JAV94073.1    ABLF02012672    AAGJ04038612    AAGJ04038613    ABLF02026661    ABLF02026674    ABLF02026675    ABLF02041813    ABLF02060074    RSAL01000210    RVE44232.1    GEZM01058056    GEZM01058054    GEZM01058052    GEZM01058051    GEZM01058048    JAV71930.1    ABLF02010023    BABH01016775    GGMR01008668    MBY21287.1    ABLF02014818    ABLF02014820    RQTK01001146    RUS71879.1    GFTR01007350    JAW09076.1    ABLF02018334    GAIX01003312    JAA89248.1    RJVU01027735    ROL48958.1    ABLF02013018    KB201847    ESO94282.1    ABLF02038617    PYGN01000078    PSN54975.1    PYGN01001139    PSN37257.1    GEHC01000993    JAV46652.1    PYGN01000490    PSN45481.1    ABLF02012895   

Proteomes

UP000007819    UP000053097    UP000015103    UP000283053    UP000005204    UP000007110    + More
UP000271974    UP000030746    UP000245037   

PRIDE

H9JF09    H9JMR7   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF04500   FLYWCH
PF10551   MULE
PF04218   CENP-B_N
PF01192   RNA_pol_Rpb6
PF13359   DDE_Tnp_4
PF16064   DUF4806

Interpro

IPR029526   PGBD        + More
IPR012337   RNaseH-like_sf       
IPR018289   MULE_transposase_dom       
IPR007588   Znf_FLYWCH       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR036388   WH-like_DNA-bd_sf       
IPR020708   DNA-dir_RNA_polK_14-18kDa_CS       
IPR036161   RPB6/omega-like_sf       
IPR006110   Pol_omega/K/RPB6       
IPR012293   RNAP_RPB6_omega       
IPR018247   EF_Hand_1_Ca_BS       
IPR027806   HARBI1_dom       
IPR032071   DUF4806       

SUPFAM

SSF53098   SSF53098        + More
SSF46689   SSF46689       
SSF63562   SSF63562       

Gene 3D

1.10.10.10     3.90.940.10    

ProteinModelPortal

J9LYS5   J9LMT7   A0A2S2NW59   A0A2H1WUL7   J9KBE8   A0A2W1C4W6   + More
A0A026WEZ7   T1HH44   A0A2H1X0U8   A0A3S2LBW7   A0A0A9VZA8   J9KD89   H9JF09   J9LN28   J9LH36   J9LBW7   A0A0A1XB56   A0A3S2M8H5   J9M4G9   A0A2R7WJY1   X1WUB1   J9KUZ7   J9L9L9   W4XW95   W4ZD48   A0A3S2P4C8   A0A3S2N704   W4YFK8   J9KRP2   J9M3G1   J9KUZ8   A0A336L7N8   W4XFL6   A0A1Y1MM80   A0A1Y1N893   J9M2W1   W4XFL7   J9LAK0   A0A3S2TF04   A0A1Y1LHW9   X1X3M6   H9JMR7   A0A2S2NVW0   J9KUE4   A0A3S1ATS4   A0A224X9R1   X1XHP1   S4PHD9   A0A3N0YTD4   J9LBJ2   V4ABT9   J9LY49   A0A2P8ZEQ7   A0A2P8XZ32   A0A1W7R683   A0A2P8YMK7   J9M8J2  

KEGG

NA   

GO

GO:0016021   GO:0003677   GO:0006366   GO:0006360   GO:0005666   GO:0005736   GO:0006383   GO:0005665   GO:0003899  

Length:

744

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00443

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00013

outside

1  -  744

 

 

Pi

206.009941

Theta

129.795103

Tajima's D

-0.94093

CLR

0.786442

CSRT

0.147842607869607

Interpretation

Uncertain