Silkworm Genome Informatics Database

Gene

KWMTBOMO06958

Pre Gene Modal

BGIBMGA010300

Annotation

PREDICTED:_protein_nubbin-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr12(-):300467-310695 View in EpiBrowser

Transcription factor

Pou

Location in the cell

Nuclear Reliability : 4.397

CDS

ATGATTACATCTTCCGAAGAGTCGGGCGAACTCATCAAATCGCCATCTCCACCACCAAGTCACGATGGTTCTGCTAGCGGCGAAGGTGAAATCAGCGGAGACGAGCGGCCCCCGTCCCCGCCGCGCGCCCCTTCCGCCCCCCTGCCTCACCCCGCGCACCCCGCGCACCCCGCACACCCGGGACCCCCACATTCAGCTGCAAGCGCTGCTGCTGCAGTTCTTTTCCCTATGATGCAGAGCGCGGCCGGCGCGGGCGGCGCCCTCGCGCAGCTGCAACACCTGCTGCTGACCCAGCACGGAGCCCACTCGCTGCTGCTGCACACCCAGGTGCAACAGGCGGTGGCACAAGCAGCCGCCCAACAGCTGCAACAGCTGCAGGCACGGGCCAGCGTCGTGCCGCAGCCCACCACAGAGGGAAGATCTCCGTCTCCCCGGCGCACGCCCCCCGGCGCCGGTGCCTTCCTGACCCCCCACACGCCGGGCTCGGGTCGCGCGCGCTCGCCGCACACGCACACGCCACTGCACGCGCACGCACACAAGCCGCGCGCCCTGGAGCCCGCCGTCGACGACACCGCCGACCTCGAGGAGTTGGAGCACTTTGCTAAGACTTTCAAACAGCGCCGCATTAAATTAGGATTCACACAGGGCGACGTTGGCTTGGCCATGGGCAAACTGTACGGCAACGACTTCTCGCAGACCACGATCTCGCGGTTCGAAGCTCTGAATTTGAGCTTCAAGAACATGTGCAAGCTAAAGCCGTTGCTGCAAAAGTGGCTGGAGGATGCCGACTCGTCGTTAGCGGGGGGAGGCGGGGTGGCGGGCGCCGGGGCGGGGCTCGGCGCGGGGCTCGCGGAGGCGGTCGGCCGGCGCCGCAAGAAGCGCACCTCCATCGAGTCCGGGGTCCGCGTCGCGCTCGAGAAGGCTTTCCTGCACAATCCGAAGCCCACCAGCGAGGAGATCGCCGCCCTCGCCGACTCGCTCTGCATGGAGAAGGAAGTGGTGCGAGTCTGGTTCTGTAACCGGCGACAAAAGGAGAAACGCATCAACCCCCCGACGGGTGAGGGCGGTGCGGGGCTGCTGCCGGCGCTGGCGCACGCGCACTCGCACGCACTGCACGCGCACGCGCACGCGCAGGCCCACGCGCACGCACACGCGCACGCTTTGCAGCCGCTGGCGCTGCTGGGCCGGGCGCTCCCCGCACCGCGCGACTGA

Protein

MITSSEESGELIKSPSPPPSHDGSASGEGEISGDERPPSPPRAPSAPLPHPAHPAHPAHPGPPHSAASAAAAVLFPMMQSAAGAGGALAQLQHLLLTQHGAHSLLLHTQVQQAVAQAAAQQLQQLQARASVVPQPTTEGRSPSPRRTPPGAGAFLTPHTPGSGRARSPHTHTPLHAHAHKPRALEPAVDDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLAGGGGVAGAGAGLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKEKRINPPTGEGGAGLLPALAHAHSHALHAHAHAQAHAHAHAHALQPLALLGRALPAPRD

Uniprot

NA

ProteinModelPortal

NA

PDB

1OCT E-value=6.02918e-56, Score=550

KEGG

101744796 no KO assigned | (RefSeq) POU domain, class 2, transcription factor 2-like

GO

GO:0003700 GO:0006355 GO:0043565 GO:0003677 GO:0006886 GO:0004317 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

403

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.19268

Exp number, first 60 AAs:

1e-05

Total prob of N-in:

0.00682

outside

1 - 403

Pi

162.9392

Theta

159.708869

Tajima's D

-0.369834

CLR

0.394957

CSRT

0.272086395680216

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics