SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06952
Pre Gene Modal
BGIBMGA008420
Annotation
_gustatory_receptor_18_[Bombyx_mori]
Full name
Gustatory receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.257
 

Sequence

CDS
ATGAGGCGATCGACAAAAGTCATCTCGCTGGTCAAGCAGTCAGATAAGGGAGAAATCAAAACATGTTCCAGATTCATGAAGATATACTTCTTCGTGATTTACATTCTTACTGGATTCAACTTCGGTTTCTACACCGGCTGCGGCCTCAACTTCTTGCGAGTCATACAAGCTTCAGTCTTATTACTGAGATCGATCATCGCTTCATACAGCATTTATGTCGCGATTCATTTCCGGGTCCTGGAAGCAATTTGGTACTGTTTGACTTTCAGCGAAAGCTTAATGGTAGTGGTCTGCTTCATGCTGAGTAGATCTGCTCTGAGCTGCAAGAGCCTGTTCGAGTACTTGTACAGTGTCGACCAGGAGTTGAAGAAGAGTGTCGGTCCCAGCATCGAAGTGAAGCTCGTGCTGTACACGGTCGTGGTGAGCGTGCTGAGACTGACTGTCTACGTGTTCTGTGCTATCGCCTACTACGAGAGCCTTCACGAAGGATTTTCCGTCGAGTTAATCTACAACACACCTTGTTACTGCTCGGATCTGTATCTCGTGGTACACTTTACAATATTTCATTCGGTTTACTGTCGACTGAAGGCGCTGAGAATATCTATGAACGAGAAATTTGATGTTTACAAAGGTACTCTCATATACAAGTCGTTGATTGATAATTTGGAAGAAATCAAAAAAAGTTTGGATGTTCCGGTAAATATTTATAGCTCTGTTTCAGTAGTTTTTATTTGCTGA
Protein
MRRSTKVISLVKQSDKGEIKTCSRFMKIYFFVIYILTGFNFGFYTGCGLNFLRVIQASVLLLRSIIASYSIYVAIHFRVLEAIWYCLTFSESLMVVVCFMLSRSALSCKSLFEYLYSVDQELKKSVGPSIEVKLVLYTVVVSVLRLTVYVFCAIAYYESLHEGFSVELIYNTPCYCSDLYLVVHFTIFHSVYCRLKALRISMNEKFDVYKGTLIYKSLIDNLEEIKKSLDVPVNIYSSVSVVFIC

Summary

Description
Gustatory receptor which mediates acceptance or avoidance behavior, depending on its substrates.
Similarity
Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family.
Pfam
PF08395   7tm_7
Interpro
IPR013604   7TM_chemorcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
245
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
94.0931
Exp number, first 60 AAs:
25.66772
Total prob of N-in:
0.78859
POSSIBLE N-term signal
sequence
inside
1  -  27
TMhelix
28  -  45
outside
46  -  54
TMhelix
55  -  77
inside
78  -  83
TMhelix
84  -  106
outside
107  -  133
TMhelix
134  -  156
inside
157  -  245
 
 

Population Genetic Test Statistics

Pi
135.764194
Theta
137.203004
Tajima's D
-0.032949
CLR
0
CSRT
0.354332283385831
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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