Silkworm Genome Informatics Database

Gene

KWMTBOMO06944

Annotation

endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]

Location

Bomo_Chr12(-):170843-174995 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.324 Nuclear Reliability : 1.532 PlasmaMembrane Reliability : 1.121

CDS

ATGTACACATCCGCGGGATGGAATGATGCCAGGAGACGCCAGGATCCTAATACTTCTGAGGAAAGGCGGAAATTTAACGCCGCTTCTAGGTCCTATAAGAGGGCTATTGCCAAGGCGAAGTCGGAGCACGTTGCCAGAATTGGCGAGCGACTGAAGAGCTATCCCGCCGGGAGCCGTGCTTTCCGGTCGCTCGCTAAGGCTGCAGAAGGTAACTTCTGCAGGTCTAGTCTCCCACCACTACGCAAGTCCGATGACAGTCTGGCCCATAGTGCGAAAGAGAAGGCTGACCTTCTGGTCAAACTCTTCGCCTCGAACTCGACTGTGGACGACGGGGGTGCCACACCACCGAACATCCCTCGGTGTGATAGTTCCCTGCCGGAGATCTGCTTTACACAGTGTGCAGTCAGGCGGGAACTCCGACTCCTGGACGTCTATAAGTCGAGTGGGCCAGACGGCATCCCTGCAGTGGTTCTAAAAACGTTCGGTGCTCTCCCCACGCTTTTCATCCTGTATATCAATGACATGCTGTCTATTGATGGCATGCATTGCTATGCGGATGACAGCACGGGGGATGCGCGATATATCGGCCATCAGAGTCTCTCTCGGAGCATGGTGCAAGAGAGACGATCAAAACTTGTGTCTGAAGTGGAAAACTCTCTGGGGCGAGTCTCCAAATGGGGTGAATTGAACTTGGTTCAATTCAACCCGTTAAAGACACAAGTTTGCGCGTTCACTGCGAAGAAGGACCCCTTTGTCATGGCGCCACAATTCCAAGGAGTATCCCTGCAACCTTCCGAGAGTATCGGGATACTTGGGGTCGACATTTCGAGCGATGTCCAGTTTCGGAGTCATTTGGAAGGCAAAGCCAAGTTGGCGTCTAAAATGCTGGGAGTCCTCAACAGAGCGAAGCGGTACTTCACGCCTGGACAAAGGCTTTTGCTTTACAAAGCACAAGTACGGCCTCGCGTGGAGTACTGCTCTCATCTCTGGGCCGGGGCTCCCAAATACCAGCTTCTTCCATTTGACTCCATACAGAGGAGGGCCGTTCGGATTGTCGATAATCCCATTCTCACGGATCGGTTGGAACCTCTGGTTCTGCGGAGGGACTTCGGTTCCCTCTGTATTTTGTACCGTATGTTCCATGGGGAGTGCTCTGAGGAATTATTCGAGATGATGCCGGCATCTCGTTTTTACCATCGCACCGCCCGCTACCGGAATAGAGTTCATCCATACTACCTGGAGCCACTGCGGTCATCCATAGTGCGTTTCCAGAGGTCTTTTTTGCCACGTACCATCCGGCTATGGAATGTGCTCCCCTCCACGGTCTTTCCCGACCGCTATGACATGTCCTTCTTCAAACGAGGCTTGTGGAGGGTATTAAACGGTAGGCAGCGGCTTGGCTCTGCCCCTGGCATTGCTGAAGTCCATGGGCAACGATACAAATGTTTGCATTTAGAAGCCGTAAGCGACTTCACCAAAGAGGCATTCATATTATCGTTGCGTCGTTTTATCTCTCGCCGAGGTAAGCCGAAGGAGATTTTCTGCGATAATGGCAGAAAATTCGTATCTGCATCCAAAGAGATTACAGAATTTGTGAACTATCATGCTGATGGCGTCGGTGGATTCCTTTCTAGTGAAGGAATTTATTTTAAATTTCAACCGGGATATGCAGCACACTTTGGGGGTCTATGGGAGGCGTCAGTCAAATCAGCCAAATTTCATTTGAAAAGAATTCTCGATAACACTCACTGCACATTTGAAGAATTAGCTACTTTGTTTAATCAAATCGAGGCCATACTCAATAGCAGGCCTTTATGTCCCTTATCTTCCTCTCTTGATGACCTTGCTCCTCTGACTCCCGGACACTTCTTCATTGGAAGACCTTTAACGTCGTTGCCATCACCTAAATACATGCATCTTAGTACCTCTAGATTGAGCCGATACCAACACTTGGAGCAAATTCGTCAACATTTTTGGAATCGATGGCAGCAAAGCTTCGATCAACAGTTACTATTGTTGATCGAAGCAGCAAAGTCACAAATGGCGCGTACCAGCAAGATCAATCCAGAATGGCGGCTTGGTTCTACTGAAGGACGAGAATATTCCACCGATGCAATGGCGGACGGGTCGAGTCATCAACATATTTCCAGAAAAGGACAATATCGTGCGAGTAGCCGAAATCAAAACTTCGAGTGGCGCTTATCGACGTGGACTTCGATCTCTTTGTCCTCTATTGGATACTGCAGAAGATTCTTCATTGGAAGCAAATGCTTCCAAGGCCCCGGAGGATGTTAA

Protein

MYTSAGWNDARRRQDPNTSEERRKFNAASRSYKRAIAKAKSEHVARIGERLKSYPAGSRAFRSLAKAAEGNFCRSSLPPLRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNIPRCDSSLPEICFTQCAVRRELRLLDVYKSSGPDGIPAVVLKTFGALPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSMVQERRSKLVSEVENSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRPRVEYCSHLWAGAPKYQLLPFDSIQRRAVRIVDNPILTDRLEPLVLRRDFGSLCILYRMFHGECSEELFEMMPASRFYHRTARYRNRVHPYYLEPLRSSIVRFQRSFLPRTIRLWNVLPSTVFPDRYDMSFFKRGLWRVLNGRQRLGSAPGIAEVHGQRYKCLHLEAVSDFTKEAFILSLRRFISRRGKPKEIFCDNGRKFVSASKEITEFVNYHADGVGGFLSSEGIYFKFQPGYAAHFGGLWEASVKSAKFHLKRILDNTHCTFEELATLFNQIEAILNSRPLCPLSSSLDDLAPLTPGHFFIGRPLTSLPSPKYMHLSTSRLSRYQHLEQIRQHFWNRWQQSFDQQLLLLIEAAKSQMARTSKINPEWRLGSTEGREYSTDAMADGSSHQHISRKGQYRASSRNQNFEWRLSTWTSISLSSIGYCRRFFIGSKCFQGPGGC

Uniprot

NA

ProteinModelPortal

NA

KEGG

101745651 no KO assigned | (RefSeq) uncharacterized LOC101745651

GO

GO:0003676 GO:0015074 GO:0016192 GO:0005484 GO:0006886 GO:0004317 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

764

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.0904

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05312

outside

1 - 764

Pi

197.567407

Theta

188.210477

Tajima's D

0.216819

CLR

29.19674

CSRT

0.430528473576321

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics