Gene
KWMTBOMO06938
Pre Gene Modal
BGIBMGA001742
Annotation
putative_s-syntaxin_[Danaus_plexippus]
Location in the cell
Nuclear Reliability : 2.59
Sequence
CDS
ATGGCCGTCCGGGACCGACTCGCCGAGCTCCAGCACGTGTCCGCGGGCGCCGGCGGAGTGTACGCCGACACGGTGCAGCTGGACCCGCACGACACCTCTGACGACAAAATCCACACCATGTTCCAAGAGGTGGAGCGCATGCGCGGCTGGATCCGGGACCTCGACGACAACACGCAGCTCGTGCGCCGCCTGTACTCCGACCCCACCTACCACACCAACAGACAGCTCCAGGAGCAGCTGGACCGCGCGGTGACGCAGTCGAACGCGCTGGGACTCAAGGTGTGCGGCGCGCTGAGACAGTTCGAGACGCGCGTGGCGGGCGGGGGCGCGGGTGGGGGCGGGGGCGGCACGCTGTGGAGGATCGCGCGGCTGCAGTACGCGGCGACGCGGCGTCTGTACGGCGACGCTCTGGACCAGCACCGCCGGGCCCTGGACGCCGTGCGCGACCACCAGCTACTGCTGCTGCACCAACAGATCAAGTTGAGTAAGGACGCTCTCTATACTGTACAGCGCTGCTGCAACACTGCCACCCAACGTCAAGTATGCAGACAGGTGTACACCGGGCCGCTGCAACATTACGAGTTAACAAGCCCTAATGCCTTAACCGCTCGTAGGACTCGCCTGGCAACTGAATGA
Protein
MAVRDRLAELQHVSAGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRRLYSDPTYHTNRQLQEQLDRAVTQSNALGLKVCGALRQFETRVAGGGAGGGGGGTLWRIARLQYAATRRLYGDALDQHRRALDAVRDHQLLLLHQQIKLSKDALYTVQRCCNTATQRQVCRQVYTGPLQHYELTSPNALTARRTRLATE
Summary
Similarity
Belongs to the syntaxin family.
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00804 Syntaxin
Interpro
SUPFAM
SSF47661
SSF47661
ProteinModelPortal
PDB
1S94
E-value=0.000702526,
Score=98
Ontologies
GO
PANTHER
Topology
Length:
211
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18382
Exp number, first 60 AAs:
0.00096
Total prob of N-in:
0.09902
outside
1 - 211
Population Genetic Test Statistics
Pi
158.524208
Theta
158.127647
Tajima's D
0.153645
CLR
0
CSRT
0.407929603519824
Interpretation
Uncertain
