Gene

KWMTBOMO06934

Annotation

PREDICTED:_uncharacterized_protein_LOC106720787_[Papilio_machaon]

Location

Bomo_Chr12(-):28183-29005      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.727

CDS

ATGGAAACACAATTTCAACTTTTGTTTGAAAAAATGAAATTAGAAATGCAAAAACAGTCTGAATCTATTACACATAACATAATGTCTAGAATTGATGAAAAACTAATCCCGATCATTGAAGAAAACAAAAGCTTAAAGTTAAAAATAGAAGCTCAACAAAAAGAGATAGAATACTTGAAGAGGGAAAAAAGGAATAACAATATAATTATATTTGGCGTGGAAGAAAAAGAGAAAACAACATTAGAATTAATGGATATGATAAAGAAAACTTTCAAAAACGACATAAATATTGATATCGAAGAAAATGCAATAAACAATTTATACCGATTAGGTAAAAGAAGTATCCAAGGTAACAAACCGAGGCCAGTCTGCTGTTCTTTCGTAAACGGATGGAAAAAGAATGAGATAGTAAAAAATAAAAAATATCTTAAGGAGATATATGTCACCGAAGATTATCCAAAGAATGTACTGGCCAAAAGGAAGGTGTTACAGGCGGAGTTGATTGAAGAAAGGAAGAAGGGTAAAATAGCGTATTTGAAATATGATAAGCTTATAGTGAAGGAAATGGACACAACTAACGAAAAAAGAAAAAAGGAAACTTCTTCTTCACCGCATTCTTCAGACTTTCAACCTAAAAAACAGCAAGCCACCGTACCCTCTAAGGCCAATAGAGCCAACGCATTTGACGTGATGAGAATGAGATCTAACTCTCTTACTAACGTCCTTACAAACAAGCAACAGTAG

Protein

METQFQLLFEKMKLEMQKQSESITHNIMSRIDEKLIPIIEENKSLKLKIEAQQKEIEYLKREKRNNNIIIFGVEEKEKTTLELMDMIKKTFKNDINIDIEENAINNLYRLGKRSIQGNKPRPVCCSFVNGWKKNEIVKNKKYLKEIYVTEDYPKNVLAKRKVLQAELIEERKKGKIAYLKYDKLIVKEMDTTNEKRKKETSSSPHSSDFQPKKQQATVPSKANRANAFDVMRMRSNSLTNVLTNKQQ

Uniprot

A0A2A4J1F3   A0A0L7L7G4   A0A2A4K1M2   A0A2A4JJB3   A0A2A4J3C0   A0A2A4IX08   + More
A0A0L7L3X8   H9JKN5   A0A0L7LN13   A0A2W1BQP2   A0A2W1BGL1   A0A0L7LKR7   A0A0L7LNA7   A0A0L7LNF8   A0A0L7LB65   A0A2A4J436   A0A2H1V457   A0A2H1V475   A0A0L7KMI1   A0A2A4JED5   A0A2H1X3Z9   A0A0L7KQ18   H9J4J3   D7F179   A0A0L7LHT2   A0A1E1WPR1   A0A2A4J942   A0A2H1VBB6   A0A069DR53   A0A0L7L607   A0A0L7LC22   A0A2A4KAH5   A0A0L7K4V6   A0A2A4JB54   A0A0L7LPK8   A0A2H1WF27   A0A0L7LLD6   A0A194RRA2   A0A0L7KFW9   A0A1Y1MBB5   A0A0L7LAG8   D7F178   A0A0L7LFX4   A0A0L7LUV7   A0A0L7KKN3   A0A0L7LQQ8   A0A1Y1KNT7   A0A0L7KSD0   A0A0L7L5X6   A0A0L7LIY0   A0A0L7LDK8   A0A0L7LL17   A0A2H1WS99   A0A0L7K5L4   D7F177   A0A0L7LIK1   A0A0L7KQ23   A0A0L7KKY9   A0A0L7LJT1   A0A069DRC3   A0A0L7KLR1   A0A1Y1LBV0   A0A1S4EPY6   A0A3Q0JMI2   A0A0P4VVZ3   A0A1S4EPX8   A0A1S4EPX0   A0A0L7L0N9   A0A3Q0IIJ5  

Pubmed

26227816    19121390    28756777    20470440    26334808    26354079    + More
28004739    27129103   

EMBL

NWSH01004020    PCG65566.1    JTDY01002536    KOB71226.1    NWSH01000260    PCG77926.1    + More
NWSH01001196    PCG72157.1    NWSH01003397    PCG66369.1    NWSH01005231    PCG64345.1    JTDY01003098    KOB70157.1    BABH01024878    JTDY01000539    KOB76734.1    KZ149976    PZC75915.1    KZ150150    PZC72845.1    JTDY01000743    KOB76037.1    JTDY01000511    KOB76839.1    JTDY01000484    KOB76970.1    JTDY01001949    KOB72466.1    NWSH01003169    PCG66835.1    ODYU01000585    SOQ35630.1    ODYU01000586    SOQ35631.1    JTDY01008572    KOB64508.1    NWSH01001771    PCG70189.1    ODYU01013311    SOQ60019.1    JTDY01007450    KOB65190.1    BABH01021795    FJ265564    ADI61832.1    JTDY01001071    KOB74965.1    GDQN01002055    GDQN01002009    JAT88999.1    JAT89045.1    NWSH01002532    PCG68054.1    ODYU01001637    SOQ38140.1    GBGD01002698    JAC86191.1    JTDY01002701    KOB70892.1    JTDY01001738    KOB73038.1    NWSH01000023    PCG80652.1    JTDY01010650    KOB58126.1    NWSH01002039    PCG69337.1    JTDY01000408    KOB77334.1    ODYU01008249    SOQ51673.1    JTDY01000640    KOB76373.1    KQ459995    KPJ18566.1    JTDY01009971    KOB62006.1    GEZM01039814    JAV81166.1    JTDY01001987    KOB72394.1    FJ265563    ADI61831.1    JTDY01001350    KOB74106.1    JTDY01000076    KOB79001.1    JTDY01009336    KOB63636.1    JTDY01000362    KOB77536.1    GEZM01082533    JAV61335.1    JTDY01006513    KOB65949.1    JTDY01002685    KOB70933.1    JTDY01000895    KOB75518.1    JTDY01001575    KOB73484.1    JTDY01000780    JTDY01000104    JTDY01000008    KOB75906.1    KOB78842.1    KOB79479.1    ODYU01010663    SOQ55918.1    JTDY01010526    KOB58179.1    FJ265562    ADI61830.1    JTDY01000977    KOB75230.1    JTDY01007191    KOB65392.1    JTDY01009161    KOB64038.1    JTDY01000843    KOB75692.1    GBGD01002692    JAC86197.1    JTDY01009126    KOB64075.1    GEZM01063671    JAV69026.1    GDKW01002785    JAI53810.1    JTDY01003742    KOB69063.1   

Proteomes

UP000218220    UP000037510    UP000005204    UP000053240    UP000079169   

PRIDE

H9JKN5    H9J4J3    D7F179    D7F178    D7F177   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR027124   Swc5/CFDP2       
IPR004244   Transposase_22       
IPR000477   RT_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011990   TPR-like_helical_dom_sf       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF50978   SSF50978       

Gene 3D

3.60.10.10     1.25.40.10     2.130.10.10    

ProteinModelPortal

A0A2A4J1F3   A0A0L7L7G4   A0A2A4K1M2   A0A2A4JJB3   A0A2A4J3C0   A0A2A4IX08   + More
A0A0L7L3X8   H9JKN5   A0A0L7LN13   A0A2W1BQP2   A0A2W1BGL1   A0A0L7LKR7   A0A0L7LNA7   A0A0L7LNF8   A0A0L7LB65   A0A2A4J436   A0A2H1V457   A0A2H1V475   A0A0L7KMI1   A0A2A4JED5   A0A2H1X3Z9   A0A0L7KQ18   H9J4J3   D7F179   A0A0L7LHT2   A0A1E1WPR1   A0A2A4J942   A0A2H1VBB6   A0A069DR53   A0A0L7L607   A0A0L7LC22   A0A2A4KAH5   A0A0L7K4V6   A0A2A4JB54   A0A0L7LPK8   A0A2H1WF27   A0A0L7LLD6   A0A194RRA2   A0A0L7KFW9   A0A1Y1MBB5   A0A0L7LAG8   D7F178   A0A0L7LFX4   A0A0L7LUV7   A0A0L7KKN3   A0A0L7LQQ8   A0A1Y1KNT7   A0A0L7KSD0   A0A0L7L5X6   A0A0L7LIY0   A0A0L7LDK8   A0A0L7LL17   A0A2H1WS99   A0A0L7K5L4   D7F177   A0A0L7LIK1   A0A0L7KQ23   A0A0L7KKY9   A0A0L7LJT1   A0A069DRC3   A0A0L7KLR1   A0A1Y1LBV0   A0A1S4EPY6   A0A3Q0JMI2   A0A0P4VVZ3   A0A1S4EPX8   A0A1S4EPX0   A0A0L7L0N9   A0A3Q0IIJ5  

KEGG

105842844    no KO assigned | (RefSeq) uncharacterized LOC105842844

GO

GO:0003964   GO:0004519   GO:0031514  

PANTHER

PTHR23227   PTHR11505  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01224

outside

1  -  247

 

 

Pi

122.069951

Theta

192.022503

Tajima's D

-1.109318

CLR

44.221931

CSRT

0.12054397280136

Interpretation

Uncertain