Silkworm Genome Informatics Database

Gene

KWMTBOMO06931

Pre Gene Modal

BGIBMGA004656

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_IA_heavy_chain_[Bombyx_mori]

Location

Bomo_Chr11(-):20338229-20363987 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.246 Nuclear Reliability : 1.529 PlasmaMembrane Reliability : 1.089

CDS

ATGGGCAGGTCTCGTTTTGTCGGTGACCTATCGAGGTCGTTCAAACGCTCAGGAAATACCATTTCTAGTCGAAAAGTAGGTGTCGCTCGTGCTGTGCTGCGGGGTGGGGGCAGGGCGGGAGGTGAGGGGGAGCGTTGCGCGGCCGGGCCGCGGGGCGGGGCGGGCGGAGGCTTTAGTAAACGATCGTGTGCGAGCGCGAGAGGACGCCGCCGAGTTAGAAGCGGCGCGGCCGCGGAGTGTGATGCGAGCGCGCCGCCCGCCATGGCCACGCTCGGCCTCTCCAAGGTGTTCATCCTCGACAAGTACTTCACCGAGCTGCAGAAGTTCTGGGAGACTGAGAAGAAGCTGCAAGACGCGTCGTCATCGAACGAGGCGGTGCACCTGCAACGACGGCTGCTGAGTCTGAGCTCGGAGCTGGTGACGCTTCGCAACCACTTGCACGTGGGAGCGGCTGGAGGCACGGCTGCCGGTGCGGCCCCCACTGCCGGCACTAGCACCGGACAACCCGCCGTCCCGCCGAGAGCACCGCACTTGTTACCACCGCCGCCGCACGCCGCGCAACCGCCCGCTCCACCGCTTCACCCCCTGCCGCCTCCTCCTGAAACGCGATGGCGGAACGTTCCGGCCGCCCCACCACAAGCGAGCGCGGGCCCTACTCCCACGAGTGGGACGAGCGGTCCGAGCGGAGTGAGCGGTCTAAGCGCAAGTGACGTGGAGGACCTCATACATCTAAGAGGACCGCTCACAGAAGACGCGGTCGTTAGAGCGTTGCAGGCGAGATTCTATCACAATAAGTTTTATACGATGATCGGACCAATCCTCATCGCGGTAAATCCATACACGGACACCTGTAACGCATTAACGTTGACTGCGGCCCGCGCCCACCGGCCCGAGCTAGCCCGACTGGTTCACGACGCCGTGAGACACCAGGCGGACTCAGGGTACCCTCAGGCGATCATTCTCTCAGGGGTATCTGGCTCAGGGAAGACGTACGCGTCAATGGTGTTGTTGAGGAGGCTCTTCGACGTGGCCGGTGGAGGCCCCGAAACGGATGCGTTCAAGCATCTCGCGGCGGCTTTTACTGTGCTGAGGGCTTTGGGCACGGCCGCCACACCGGCTAATGCGCATTCGTCCCGTATAGGACATTTCATCGAGGTCCAAGTAACCGACGGAGCCTTGTATCGTACAAAGATCCACTGTTACTTCCTCGACCAGACCAGAGTGGTCCGCCCTCCAGCTGGCGAACGAAACTATCACATCTTCTACCAGATGCTGGCCGGACTCACACCCGACGAGCGATCGCAACTTCATCTTGAAGGTTATTCCGCTCAGGACTTAAGGTATCTAGCATCCCCCCATCACCGTAGAGCAGAGCCAGAAGATGCTGCAAGATTCCATGCGTGGAAAACCTGTCTCGTTATTCTCGGTATACCGTTCCTTGACGTAGTACGAGTTTTAGCGGCTGTCCTATTACTTGGCAACGTTCAGTTCGCCGAGAGCGCTGAGGGTGGGGCCGAGCCAGCCGGAGAAGCAGAGCTAGCAGCAGCCGCGGCTCTGCTAGGAGTTGCAGCGCCGGCATTGTTACGAGGCTTGGCAATGCGGGCTCCACCTCGGACTTCATCTGCGCGATCAGTGCGCGTACCAGCCACCCCAGCGGCGGCTTCATCAGCGCGTGATGCACTGGCCAAAGCATTGTATTGCCGAACAGTGGCGACTATAGTGCGTAGAGCCAATTCGTTGAAACGCTTAGGATCTACTTTAGGCACGCTTTCGTCGGATTCAACTGAATCGGTACACGCGCAAGAAGCACGTCGAGCGTCATCAGCAGGCGGGTCTCGAGCGGGCGCTCGTTCAATGGCTGCACTTAACGACGCCGTACGACACGCCACTGATGGGTTCGTGGGGATATTGGACATGTTCGGTTTCGAGGACGCAGCCCCGAGTCGACTGGAGCACCTGTGCGTTAATCTGTGCGCAGAAACAATGCAACACTTTTATAATACTCACGTGTTCAAATCCGCCGCTGAATCTTGTCGCGAGGAAGGTGTGGCGTGTCCGCTCGAAGTGGAATACGTCGACAATGTGCCGTGTATTGATTTGGTGTCATCCTTGCGAGGCGGACTGCTTGCTGCACTGGACGCAGAATGTGCAGCCCGTGGTACTCCAGAACAATACGTAGTGCGCATTAAAACAGCACACAGAGGTCATCCGCGACTGGCGGAGGCTCGTCCACCGCACCCTCGAAGGTTTGCAGTGCGGCATTATGCTGGTGAAGTGGCATACGACACGGTGGACTTCTTGGAAGCTAATCGCGACGCCGTCCCTGACGACCTCCTTGCCGCCTTCGAAACTGGAACCTGTGAATTTGGTTTTGCTACACATCTTTTCGGGGCTGAACTTAAAGCCATGGCAGCACAAGGCGGGGCAGCGAATTCTGGGGGTGGATTCTTCCGTGCGTCCCCCACAGTTGCTGCAGAAGCAGGCTCGACACTCACACAAGACTTCCACACGCGTCTCGACAACTTGCTCCGTACGCTCGTGCACGCTCGCCCGCACTTCGTGCGCTGTTTGCGGGCTAACTCTACGGAAACACCAATGCTCTTTGAAAGGACGACTGTAGCGCGACAGGTCCGTGCACTACAAATATTAGAAACGACGCAGCTAATGGCCAGTGGGTACCCGCACCGGATGCGTTTCCGTGCGTTCAGCGGACGGTACCGGGCACTGTGCCGCGGCGCGGGGGGCGGGGCGAGTGCGGGGGCTGCGGGGAGCGTGGCGGGCGCGGAGGGGGAGGCGTGCGGGCGGGTACTGAGGGCAGTGCAGGCTGCGGCCGCTCCACCAGCCCCCGCCTCCCCTGCCGCAGTACGGTGGGCGCTTGGAAAGAGACACGTCTTCCTCAGTGAGGGGATGCGGCAGGTGTTAGAGCGGATGCGACGTGGTCGTCGTGAAGCGGCCGCTGCGAGTATACAGCGTGCGTGGCGGCGACACCGCGCCCGCCCCCGCCCCGCGCCGCGCCCCCGCCCCGCGCCCATCGCGCGCACCCCGCCTCCCGACCCCGCCGACAAGTGCGACCCCGCGCTCGTTAAGCGAACGTGCTCGCTCTTTGGACTCGACCTCGAGCGTCCCCCACCGCTGCCCCCGTCCCGCGCGTACACCGTGTCGGGGGGCGTGAAGCTGAGCTACCCGCAGCAGCGCGCCGTGAGTGCCGAGTGGAGCGACGAGGGCGGCGCGCGCCTGCGCCCCGGCGACACCGTGCTCGTGGTCGGCGCCGCCCGCCGGGGACACCTCGCTGTACAGGTCCGATACAACACCTTTTTTTTATTGTCGTATTTTACTTGA

Protein

MGRSRFVGDLSRSFKRSGNTISSRKVGVARAVLRGGGRAGGEGERCAAGPRGGAGGGFSKRSCASARGRRRVRSGAAAECDASAPPAMATLGLSKVFILDKYFTELQKFWETEKKLQDASSSNEAVHLQRRLLSLSSELVTLRNHLHVGAAGGTAAGAAPTAGTSTGQPAVPPRAPHLLPPPPHAAQPPAPPLHPLPPPPETRWRNVPAAPPQASAGPTPTSGTSGPSGVSGLSASDVEDLIHLRGPLTEDAVVRALQARFYHNKFYTMIGPILIAVNPYTDTCNALTLTAARAHRPELARLVHDAVRHQADSGYPQAIILSGVSGSGKTYASMVLLRRLFDVAGGGPETDAFKHLAAAFTVLRALGTAATPANAHSSRIGHFIEVQVTDGALYRTKIHCYFLDQTRVVRPPAGERNYHIFYQMLAGLTPDERSQLHLEGYSAQDLRYLASPHHRRAEPEDAARFHAWKTCLVILGIPFLDVVRVLAAVLLLGNVQFAESAEGGAEPAGEAELAAAAALLGVAAPALLRGLAMRAPPRTSSARSVRVPATPAAASSARDALAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSTESVHAQEARRASSAGGSRAGARSMAALNDAVRHATDGFVGILDMFGFEDAAPSRLEHLCVNLCAETMQHFYNTHVFKSAAESCREEGVACPLEVEYVDNVPCIDLVSSLRGGLLAALDAECAARGTPEQYVVRIKTAHRGHPRLAEARPPHPRRFAVRHYAGEVAYDTVDFLEANRDAVPDDLLAAFETGTCEFGFATHLFGAELKAMAAQGGAANSGGGFFRASPTVAAEAGSTLTQDFHTRLDNLLRTLVHARPHFVRCLRANSTETPMLFERTTVARQVRALQILETTQLMASGYPHRMRFRAFSGRYRALCRGAGGGASAGAAGSVAGAEGEACGRVLRAVQAAAAPPAPASPAAVRWALGKRHVFLSEGMRQVLERMRRGRREAAAASIQRAWRRHRARPRPAPRPRPAPIARTPPPDPADKCDPALVKRTCSLFGLDLERPPPLPPSRAYTVSGGVKLSYPQQRAVSAEWSDEGGARLRPGDTVLVVGAARRGHLAVQVRYNTFFLLSYFT

Uniprot

NA

ProteinModelPortal

NA

PDB

4ZLK E-value=8.23603e-35, Score=373

KEGG

101743597 K16677 dachs | (RefSeq) myosin IA heavy chain

GO

GO:0003774 GO:0005524 GO:0016459 GO:0004298 GO:0005839 GO:0051603 GO:0006418 GO:0016020 GO:0005634 GO:0006260

Length:

1112

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.468900000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00335

outside

1 - 1112

Pi

23.469533

Theta

22.302546

Tajima's D

0.166706

CLR

1.565115

CSRT

0.418329083545823

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics