Gene

KWMTBOMO06926  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004658

Annotation

putative_stromal_antigen_[Danaus_plexippus]

Location

Bomo_Chr11(-):20236930-20265417      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.64

CDS

ATGCATCGTCGAGGCGGGAAACGTATACGGATGGACGATCCTCCACCGGAGTATGTAAATCCTATGACTCCGGCTACTCCTATGACGGACTATGGTGGCCAATCTGTCCATGAACCTGAAACGCCTAATGTGAACTATAGTGGCTTTAATACTGGTGCAGTAGCTAACTCGACGGCAGTGGAAGCGCCACGAGAGGAAGCTGAAGAATCGCATCACGAGGAAGAGGAACCGAGGTCTCCATCTCCGACCCTCAAGCGGGTGACTCGAAGTCGAGGTAGACGCGCAGATGGTGGTTATGTGGGGCGATTGGCGGAGTCTCCGCCGCCACCGCCTATACGACGTCGAGGCCGCGGTGTCCGTGGTCGTGGCAGAGGACGAGGTGCCGCTCCACCTCCAGCATATTCTCCACCCCCGGTGCTCCTGCCTGGAGATGATGAAAACAGTTTATATAATATTTTGAGGTTCAACAAGACCGCAATAAACCAAGTAGTAGACAAATGGATAGAGGAGTACAAAACAAATCGTGAAGTGGCTTTAGTTCAACTGATGCAGTTCTTCATCAACTCTTCCGGTTGCAGAGGGAAGGTTTCTCCAGATATGGCACAGATGGATCACACACTAATAATAAAAAAAATGACACAGGAATTTGATGAGGAAAGTGGTGAATATCCTCTGATAATGACTGGTCAAACCTGGAAAAAGTTCCGTTCTAACTTTTGTGAGTTCATTCAGACCCTGGTAAAGATGTGCCAATACTCCATCATCTATGATCAATATTTAATGGACAATATCATTTCATTACTCACTGGGCTGTCTGACTCACAAGTCCGAGCTTTCCGTCACACTGCGACATTAGCTGTAATGAAGCTAATGACCGCTCTAGTTGATGTGGCGTTATTAACTAGTGTAAATTGTGACAACTGTCTTCGGCAATATGAAGCAGAAAGATTGAAGGCACGTGATAAGCGGGCCACTGAACGCCTTGAAGTGCTGGTGGCTAAACGTCAAGAACTAGAGGAGAACATGGAGGAGATTAAGAATATGCTGTCTTATATGTTTAAATCTGTGTTTGTCCATCGATACAGGGACACTTTGCCAGATATAAGAGCCATAACTATGTCTGAGATTGGCATTTGGATGGAGAAATTTCCAGCTCATTTCCTTGATGATCTTTATTTAAAATATATTGGATGGACACTTCATGATAAGGTGGGTGAAGTGCGTCTTCGCTGTCTGCAAGCCCTACAACCTCTATATGAATGTGAGGAGTTGAAGGGTAAACTGGAACTCTTCACGTCTAAATTCAAAGATCGGATAGTTTCTATGACCCTCGATAAGGAAACTGATGTGGCCGTGCATGCTGTGAAGTTGGTTATAGCTATTCTCAAGATGCACCCGGACGTGCTGACGGACAAGGACTGCGAGAACGTGTACGAACTGGTGTACTCGTCGTGGCGCGGCGTGGCGGCGGCGGCCGGAGAGTTCCTCAACGTGCGCCTGTTCCGCGCCGACCCCGCCGCGCCCGCGCCCCCCGTGCTGCGCTCGCGCCGCGGCAAGCTGCGCCTGCCCAGCACGCCGCTCGTGCGGGACCTCGTGCAGTTCTTCATAGAGTCCGAGTTGCATGAACATGGTGCTTATTTAGTGGATTCATTGATTGAATCAAATCCCATGATGAAGGATTGGGAGTGTATGACTGACCTACTGCTCGAAGAAGCTGGTCCTGGGGAAGAGGCACTGGATAATAGACAGGAGTCGTCGCTGATTGAGCTGCTGGTGTGCTGCGTGCGGCAGGCGTCCACCGGGGAGCCGCCCGTGGGCCGCCAGCCCTCGCGCAAGCAGCACGTCGCGCTCTCCAAGGATCAGGCCAAGGTTGTAAGCGACGACCGAGCTAAAATGACAGCACACTTCATTGTGACCCTGCCGGCCCTGCTGGACAAGTTCGGTGCGGACCCGGAGAAGCTCACCAACCTGGTGTCCATCCCGCAGTACTTCGACCTGGAGATCTACACGACGCAACGGCAGGAAGGGAACCTAACCCTGCTGCTGAACAAGCTGCGCGACATCGTGAGCGTGCAGACGGAGGCGGAGGTGCTGGAGACGTGCGGGCGCACGCTGGAGTTCCTGTGCAGCGAGGGCTGCTCCGTGTACACGCGCTGCAACGTCGCGCGCGCCACCATCACCGACGCCTGCGTCAACCGATACAAGGAGGCCATCGACGACTACAGGAGCCTCATCGAAGGGGGTGAAACACCGGATGCAGATGAAGTGTTCAACGTGATAAATTCCCTGCGGAAAGTTTCCATAATGTACATGTGTCACAATCTGAACGACACCAATATCTGGGACTCGCTGTTTGAAGACCTACCCAAGTGCTTGAAGCAGAATGAAACACAGATGCCGTCACAGGCCCTGGTGTACGTGGTGCGCGCGCTGTTCTACTCCGTGCTGTGGTCGCTGCACGCGCTGGAGGAGCGCGCGGGGGGTGCGGGCGGCGCGGGGGGTGGCGCGGGGGGAGCGGGGGGCGCGGCGGCGCTGCGGGACCGGCTGCGCGCCTACTGCGCTCTGTGCACGGACATCGTCGTCAACGGGACCACGCCGGAGCTCAAGGAGGAGGCCTACACGAGCATCTGCGACCTGCTGATATTCTTCGCGGAGCACCTGCACACGCTGCACCACCCCAACGAGCCGTCCATGAAGCAGCTGGTGTACCAGCCCGACAACGACCTGTGCGACTTGCTCAACGACTTCATACAGGAATTCGTGTTTGTACAACACAATTACGATGGTCAAGATGAGAGACGCATAGAGGAACTGCACAAGCGCCGCAACTTCCTGGCGGCCTACTGTAAGCTCATCGTGTACAACGTGGCGCCCATACGCCGCGCCGCGGACGTCTTCAAACACTACATCAAGTGCTACAACGACTACGGCGACATAATCAAGGCGACGCTGAGCAAGGCGCGCGAGATCAACAAGCTGAACTGCGCGCTCACCATGGAGCTGGCCATGCAGGCGCTGTTCCGCGACCTGCTGCGCCGCCACGCCACCCCGCACCGACAGCTGCCGGAGTTCCTCGAGCTCAAGGAGCTGGCGAAGCGTTTCTCCGTGATGTTCGGTCTGGACGCGGTGAAGAACCGCGAGGCGCTGACCGCGCTGCACCGCGCCGGCATCGCCTTCGCCGCGCTCGACCCCGCGCCGCACGCGCCGCCGCCCAACCTGCTGTTCCTCGAGCCGCTCGGGGAGTTCTCCAACAAGCTGCTGCGCCAGGACAAGCGACAGGTGCTCAAGTTCCTGGAGTCTCGCATCCCGCAAGGGCTGCAGTGGGGCGAGGAGTGGACGGCGCTGGCGGCCTACCGCAGCGCGCTGCTCACCGACGCGCCGGACGAGCGCCCGCCGCCCGTGCGCAGGCACTACTCGCGGAGGGGACGACACGGTCAAAACGAAGACGAAGAAGGCGATGAGAACGCAGAATCGGACGGTGACCATCCAGGCACACATAAATGA

Protein

MHRRGGKRIRMDDPPPEYVNPMTPATPMTDYGGQSVHEPETPNVNYSGFNTGAVANSTAVEAPREEAEESHHEEEEPRSPSPTLKRVTRSRGRRADGGYVGRLAESPPPPPIRRRGRGVRGRGRGRGAAPPPAYSPPPVLLPGDDENSLYNILRFNKTAINQVVDKWIEEYKTNREVALVQLMQFFINSSGCRGKVSPDMAQMDHTLIIKKMTQEFDEESGEYPLIMTGQTWKKFRSNFCEFIQTLVKMCQYSIIYDQYLMDNIISLLTGLSDSQVRAFRHTATLAVMKLMTALVDVALLTSVNCDNCLRQYEAERLKARDKRATERLEVLVAKRQELEENMEEIKNMLSYMFKSVFVHRYRDTLPDIRAITMSEIGIWMEKFPAHFLDDLYLKYIGWTLHDKVGEVRLRCLQALQPLYECEELKGKLELFTSKFKDRIVSMTLDKETDVAVHAVKLVIAILKMHPDVLTDKDCENVYELVYSSWRGVAAAAGEFLNVRLFRADPAAPAPPVLRSRRGKLRLPSTPLVRDLVQFFIESELHEHGAYLVDSLIESNPMMKDWECMTDLLLEEAGPGEEALDNRQESSLIELLVCCVRQASTGEPPVGRQPSRKQHVALSKDQAKVVSDDRAKMTAHFIVTLPALLDKFGADPEKLTNLVSIPQYFDLEIYTTQRQEGNLTLLLNKLRDIVSVQTEAEVLETCGRTLEFLCSEGCSVYTRCNVARATITDACVNRYKEAIDDYRSLIEGGETPDADEVFNVINSLRKVSIMYMCHNLNDTNIWDSLFEDLPKCLKQNETQMPSQALVYVVRALFYSVLWSLHALEERAGGAGGAGGGAGGAGGAAALRDRLRAYCALCTDIVVNGTTPELKEEAYTSICDLLIFFAEHLHTLHHPNEPSMKQLVYQPDNDLCDLLNDFIQEFVFVQHNYDGQDERRIEELHKRRNFLAAYCKLIVYNVAPIRRAADVFKHYIKCYNDYGDIIKATLSKAREINKLNCALTMELAMQALFRDLLRRHATPHRQLPEFLELKELAKRFSVMFGLDAVKNREALTALHRAGIAFAALDPAPHAPPPNLLFLEPLGEFSNKLLRQDKRQVLKFLESRIPQGLQWGEEWTALAAYRSALLTDAPDERPPPVRRHYSRRGRHGQNEDEEGDENAESDGDHPGTHK

Uniprot

H9J568   A0A2H1W7V1   A0A212FLX5   A0A194QPY8   A0A2W1BTB9   A0A2A4JYP2   + More
A0A194QFE5   A0A0T6B3F1   A0A2J7PZ83   A0A067QV78   D6WLF4   A0A1Y1LJL7   Q17D80   A0A0P6IVK3   A0A1S4F7G9   A0A291S6X8   A0A182G7H5   B0WRV8   A0A1Q3FCK6   A0A1Q3FCF5   N6UG33   A0A1B6E0R9   A0A151IH37   A0A1B6GWN1   A0A195E7H7   A0A1B6KVR2   A0A195F2E3   A0A158NLC3   F4X6M7   A0A195B1U8   A0A151XCB7   A0A1B6KZR0   A0A0J7LAK2   W8BQ30   A0A182FGC3   A0A2M4CYG0   A0A2M4CYU4   A0A182JTG5   A0A0A1XDL2   A0A182QQX9   A0A146LJ60   E2BMN9   A0A0L7QNJ8   A0A3L8DQ63   A0A034W1S0   A0A2A3ED52   A0A026WYN6   A0A182NJT9   A0A182LTU8   A0A1A9VIS1   A0A1B0A6D5   A0A1B0GAR0   A0A1A9X0J4   A0A182Y313   A0A182P135   A0A0L0BR21   A0A084WRQ4   A0A182L3H4   A0A182V4C5   A0A154PPB6   A0A182TRJ4   Q7PTA6   A0A182WWM4   A0A182I6W0   A0A1I8N2I6   A0A182JA52   A0A182WHX9   W5J562   T1PK51   A0A1I8N2I8   A0A1I8PJA4   A0A1I8PJD0   T1HNF5   A0A1I8PJ88   A0A1B0C0C7   A0A1I8PJ20   E0VQR7   A0A1W4UQH3   A0A0K8VLP5   B3MKS3   A0A088A791   A0A182R9V0   B4N064   B3N669   A0A0P6E9G5   A0A0N8ENM6   A0A1A9YKR0   A0A1B0C5B4   A0A0P5SFL2   E9FV02   A0A0P5QH58   A0A164PZ63   A0A0P6F3M4   B4NZY6   A0A0P4XU45   A0A0P5A1V2   A0A0P4Y1T3   A0A0P5R2A2   B4Q5A2   A0A0P6FHV1  

Pubmed

19121390    22118469    26354079    28756777    24845553    18362917    + More
19820115    28004739    17510324    26999592    28992199    26483478    23537049    21347285    21719571    24495485    25830018    26823975    20798317    30249741    25348373    24508170    25244985    26108605    24438588    20966253    12364791    25315136    20920257    23761445    20566863    17994087    21292972    17550304    22936249   

EMBL

BABH01039384    BABH01039385    BABH01039386    BABH01039387    BABH01039388    BABH01039389    + More
BABH01039390    BABH01039391    ODYU01006893    SOQ49150.1    AGBW02007696    OWR54700.1    KQ461185    KPJ07424.1    KZ149906    PZC78299.1    NWSH01000369    PCG76929.1    KQ459252    KPJ02191.1    LJIG01015976    KRT81987.1    NEVH01020337    PNF21651.1    KK852909    KDR13941.1    KQ971343    EFA04673.2    GEZM01057701    JAV72135.1    CH477298    EAT44349.1    GDUN01000889    JAN95030.1    MF433013    ATL75364.1    JXUM01150325    KQ570973    KXJ68272.1    DS232061    EDS33523.1    GFDL01009731    JAV25314.1    GFDL01009774    JAV25271.1    APGK01028388    APGK01028389    KB740686    KB631879    ENN79576.1    ERL86904.1    GEDC01005773    JAS31525.1    KQ977647    KYN00840.1    GECZ01002928    JAS66841.1    KQ979568    KYN20789.1    GEBQ01024444    JAT15533.1    KQ981864    KYN34347.1    ADTU01019317    GL888818    EGI57809.1    KQ976662    KYM78448.1    KQ982314    KYQ58004.1    GEBQ01023040    JAT16937.1    LBMM01000035    KMR05231.1    GAMC01003200    JAC03356.1    GGFL01006194    MBW70372.1    GGFL01006193    MBW70371.1    GBXI01004808    JAD09484.1    AXCN02000522    GDHC01010456    JAQ08173.1    GL449275    EFN83057.1    KQ414851    KOC60193.1    QOIP01000005    RLU22511.1    GAKP01010680    JAC48272.1    KZ288279    PBC29675.1    KK107063    EZA60953.1    AXCM01000491    CCAG010015502    JRES01001494    KNC22482.1    ATLV01026176    KE525407    KFB52898.1    KQ434978    KZC13010.1    AAAB01008807    EAA04209.4    APCN01003702    ADMH02002070    ETN59617.1    KA648460    AFP63089.1    ACPB03010086    JXJN01023511    DS235435    EEB15722.1    GDHF01012546    JAI39768.1    CH902620    EDV31604.1    CH963920    EDW77999.1    CH954177    EDV59156.1    GDIQ01080232    JAN14505.1    GDIQ01009060    JAN85677.1    JXJN01025925    GDIQ01092428    JAL59298.1    GL732525    EFX88812.1    GDIQ01114618    JAL37108.1    LRGB01002505    KZS07282.1    GDIQ01065795    JAN28942.1    CM000157    EDW87813.1    GDIP01236719    JAI86682.1    GDIP01205460    JAJ17942.1    GDIP01235029    JAI88372.1    GDIQ01115821    JAL35905.1    CM000361    CM002910    EDX04035.1    KMY88659.1    GDIQ01048198    JAN46539.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000218220    UP000053268    UP000235965    + More
UP000027135    UP000007266    UP000008820    UP000069940    UP000249989    UP000002320    UP000019118    UP000030742    UP000078542    UP000078492    UP000078541    UP000005205    UP000007755    UP000078540    UP000075809    UP000036403    UP000069272    UP000075881    UP000075886    UP000008237    UP000053825    UP000279307    UP000242457    UP000053097    UP000075884    UP000075883    UP000078200    UP000092445    UP000092444    UP000091820    UP000076408    UP000075885    UP000037069    UP000030765    UP000075882    UP000075903    UP000076502    UP000075902    UP000007062    UP000076407    UP000075840    UP000095301    UP000075880    UP000075920    UP000000673    UP000095300    UP000015103    UP000092460    UP000009046    UP000192221    UP000007801    UP000005203    UP000075900    UP000007798    UP000008711    UP000092443    UP000000305    UP000076858    UP000002282    UP000000304   

PRIDE

H9J568   

Pfam

PF08514   STAG        + More
PF12317   IFT46_B_C
PF09791   Oxidored-like
PF10264   Stork_head

Interpro

IPR016024   ARM-type_fold        + More
IPR039662   Cohesin_Scc3/SA       
IPR020839   SCD       
IPR013721   STAG       
IPR022088   Intraflagellar_transp_cmplxB       
IPR019180   Oxidoreductase-like_N       
IPR019391   Storkhead-box_winged-helix       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

H9J568   A0A2H1W7V1   A0A212FLX5   A0A194QPY8   A0A2W1BTB9   A0A2A4JYP2   + More
A0A194QFE5   A0A0T6B3F1   A0A2J7PZ83   A0A067QV78   D6WLF4   A0A1Y1LJL7   Q17D80   A0A0P6IVK3   A0A1S4F7G9   A0A291S6X8   A0A182G7H5   B0WRV8   A0A1Q3FCK6   A0A1Q3FCF5   N6UG33   A0A1B6E0R9   A0A151IH37   A0A1B6GWN1   A0A195E7H7   A0A1B6KVR2   A0A195F2E3   A0A158NLC3   F4X6M7   A0A195B1U8   A0A151XCB7   A0A1B6KZR0   A0A0J7LAK2   W8BQ30   A0A182FGC3   A0A2M4CYG0   A0A2M4CYU4   A0A182JTG5   A0A0A1XDL2   A0A182QQX9   A0A146LJ60   E2BMN9   A0A0L7QNJ8   A0A3L8DQ63   A0A034W1S0   A0A2A3ED52   A0A026WYN6   A0A182NJT9   A0A182LTU8   A0A1A9VIS1   A0A1B0A6D5   A0A1B0GAR0   A0A1A9X0J4   A0A182Y313   A0A182P135   A0A0L0BR21   A0A084WRQ4   A0A182L3H4   A0A182V4C5   A0A154PPB6   A0A182TRJ4   Q7PTA6   A0A182WWM4   A0A182I6W0   A0A1I8N2I6   A0A182JA52   A0A182WHX9   W5J562   T1PK51   A0A1I8N2I8   A0A1I8PJA4   A0A1I8PJD0   T1HNF5   A0A1I8PJ88   A0A1B0C0C7   A0A1I8PJ20   E0VQR7   A0A1W4UQH3   A0A0K8VLP5   B3MKS3   A0A088A791   A0A182R9V0   B4N064   B3N669   A0A0P6E9G5   A0A0N8ENM6   A0A1A9YKR0   A0A1B0C5B4   A0A0P5SFL2   E9FV02   A0A0P5QH58   A0A164PZ63   A0A0P6F3M4   B4NZY6   A0A0P4XU45   A0A0P5A1V2   A0A0P4Y1T3   A0A0P5R2A2   B4Q5A2   A0A0P6FHV1  

PDB

4PK7     E-value=0,     Score=2264

KEGG

101743029    K06671 cohesin complex subunit SA-1/2 | (RefSeq) cohesin subunit SA-1

GO

GO:0042073   GO:0005929   GO:0005634   GO:0008278   GO:0007062   GO:0000785   GO:0003682   GO:0016021   GO:0035327   GO:0016322   GO:0005721   GO:0000922   GO:0007130   GO:0000780   GO:0005488   GO:0016020   GO:0005515   GO:0004888   GO:0043565   GO:0043401   GO:0006418   GO:0006260  

PANTHER

PTHR11199  

Length:

1167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12151

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00440

outside

1  -  1167

 

 

Pi

1.085137

Theta

5.38181

Tajima's D

-2.17155

CLR

319.132746

CSRT

0.00524973751312434

Interpretation

Possibly Positive selection