Silkworm Genome Informatics Database

Gene

KWMTBOMO06925

Pre Gene Modal

BGIBMGA004665

Annotation

hypothetical_protein_RR48_08438_[Papilio_machaon]

Location

Bomo_Chr11(+):20198368-20198912 View in EpiBrowser

Location in the cell

Extracellular Reliability : 4.29

CDS

ATGTCGCGTGTTCAGTGTCTACTCGTAGCGACGGCGGTGGTAGCGACCACAGTCCTGGTCGCGGCCAAGCCCTTCGATTTCGCCTTCCTGTCCGACGTCGCCAACAAGACCATGTGCCCCATCAAAGTGGTGATCGACGACAATCCCGAGCGGATCCCGCGCCGCATTAAGTTCCTAAAGTGCGACGAGAACCCGAACCGGCTCTGTCTGGAGCACCAGATCACCCACGGGTGCTGCAAGCGCCACCACCACAAGTACACCACGCAGTGCGTGGAGATCTACGACTGGGTGCAAGTGCAGTTCAACGACGTGCCCACTTCCCTGAAGGTGCCGGTCGGCTGCACCTGCACGATACAAGAGACAACAACGGCCAAGGATATATCTTGA

Protein

MSRVQCLLVATAVVATTVLVAAKPFDFAFLSDVANKTMCPIKVVIDDNPERIPRRIKFLKCDENPNRLCLEHQITHGCCKRHHHKYTTQCVEIYDWVQVQFNDVPTSLKVPVGCTCTIQETTTAKDIS

Uniprot

H9J575 A0A2A4JY32 A0A2W1BTB3 A0A2H1WMY5 A0A194QR27 A0A194Q9U3 + More
A0A0L7KR58 A0A2A4JZ16

Pubmed

19121390 28756777 26354079 26227816

EMBL

BABH01039381 NWSH01000369 PCG76927.1 KZ149906 PZC78298.1 ODYU01009778 + More
SOQ54433.1 KQ461185 KPJ07425.1 KQ459252 KPJ02189.1 JTDY01006998 KOB65536.1 PCG76928.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000037510

PRIDE

H9J575

Pfam

PF06083 IL17

Interpro

IPR010345 IL-17_fam + More
IPR029034 Cystine-knot_cytokine

SUPFAM

SSF57501 SSF57501

Gene 3D

2.10.90.10

ProteinModelPortal

H9J575 A0A2A4JY32 A0A2W1BTB3 A0A2H1WMY5 A0A194QR27 A0A194Q9U3 + More
A0A0L7KR58 A0A2A4JZ16

KEGG

NA

GO

GO:0005125 GO:0005576

SignalP

Position: 1 - 22, Likelihood: 0.970959

Length:

128

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

18.88449

Exp number, first 60 AAs:

18.88408

Total prob of N-in:

0.86645

POSSIBLE N-term signal

sequence

inside

1 - 6

TMhelix

7 - 29

outside

30 - 128

Pi

12.59083

Theta

9.73398

Tajima's D

0.651379

CLR

0.781121

CSRT

0.571621418929053

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics