Gene
KWMTBOMO06920
Pre Gene Modal
BGIBMGA000147
Annotation
PREDICTED:_longitudinals_lacking_protein?_isoforms_H/M/V-like?_partial_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 3.885
Sequence
CDS
ATGGATGACGATCAACAGTTCTGCCTGCGGTGGAACAACCATCAGTCGACGCTGGTTTCAGTGTTCGACACGCTTTTGGAGAAGGGCATGCATGTGGACTGCACCCTAGCAGCCGAAGGACAGACTCTCAAAGCGCACAAAGTAGTGCTCTCGGCATGCAGTCCCTATTTCGAGAGTGTGCTATCTCAACAATACGACAAGCATCCAATCATAATATTAAAAGACGTAAAATATGCGGAGCTACGAGCCATGATGGACTACATGTACCGTGGCGAGGTGAACATTTCACAAGACCAGCTCGCGGCTCTTCTGAAAGCAGCCGAGTCTCTGCAGATCAAAGGTCTCTCCGACAACAAGCCGTCGAGGCCGCCCTCGCGCCCGCAGCCGACCGCGCCCGCCCCCGCCGTGCCCGCGACCGCGCCGCCCGCGCCCCCCGCCCCCCTGGTGCCGCCGCTCGCCGCACGGACCGCGTCGCCCGCGCCGCTGGGTCGCGACGCGAGCCCCGACAGCCGCGAGGGCTCGCTGAGTCCGTCCCGGCGCCGCAAGAAGGCACGGCGCGGGTCGGGCGCGGCGCACAACGGCGCGTCTCCCCCTCCGCCCCCCGCGCCGCTCAAGGACGAGCTGTCCCGCGCCGACACCCTGGAGGACCTCACGCTGGACGACGAGCACCACGACGACGCGCCGCCGCCCTCCCACAACGACGTCGTGCGCAATTTCCAATGGCACATGGAGAGATCTCAAGACGAAATAATGAACTCGAGTGACAACGCCCGGGAACAGCAAGGTCGGAAACCGACGACACCGAGACAGAGTATCGTCACGCGAAGTAAAAAAGTAATGGAAGAAAGCGGCGCCACCACCCTCGCCATACTCAAGAACGTGAAGTCTCCTCCCGCGCCGTCTCCTCCCCCCGCGGGCGCGCCCCCCGGTGCCGTGTGCCCCCCGTCCGCCGCCGCCTGCCCCTCGCCCGCCGACCTCGGCAAAGAGAACGCCGCCCGGCCCGCCGCGCCCAACCCGCCCCCCGCGCCGCCCGCCGCGCCCGCCGACTCGCGCTACAACATCTTCCCGCGCGCCGACCGGGTGTCGCTGCCGTGCGCGCAGTACAAGACCGACAAGGGCTACAAGTGTCCCAACTGTCAGCGCTGCTACAACGCGCGCAAGAACCTCGTGAGGCACGTGACGCTGGAGTGCGGGCGCGACCCGCAGTACAAGGCCGATGTGTTCGCAGAGGCCGGCAAGGCGCTGCCGCCGGCGCTGCTGTCGCTGCTGAGCGTGCAGCGCGCGCTGCAGCTGGAGTACGACGACACGGACGACATCGTGCTCAGCGACGAGCCGCCGCCCGCCGAGCCGGCGCGCCAGTTCGAGTGTCGGCACTGCGGCAAGCGCTACCGCTGGAAGTCCACGCTGCGGCGCCACGAGAACGTGGAGTGCGGCGGCAAGGCGCCCGCGCACCAGTGCCCGCACTGCGCCTACCGCGCCAAGCAGCGCGGCAACCTGGGCGTGCACATCCGCAAGCACCACACGGCCGAGTGGTGTCTAGTAGGCAGACGGGAGTGTGTTGTCCCAGCGAGTGAGCGCGTGGCGGTTTCAGGGTCGACGGGCGGCGGAGAGGACGTGTCGTTCAGCCGCATCGGGGGCCTGTCGTGGGAGCAGTGGTCGGCGCGCCTGGCGTTGCCGCTGGTGGCCGGGGTGGCGGGGGTGGCGGGGCTGCGGACCCCGGACCCCGGGTTCGCGTGTCCGGACTGCGGCCGCCTGTACAAGCTCAAGTCTTCGTTGCGCAACCACCAGAAGTGGGAGTGTGGCAAGGAGCCTCAGTTCCAGTGCCCCTACTGCGTCTACCGCGCCAAGCAGAAGATGCACATCGCTCGTCACATGGAGAGAATGCACCGCGACCTGCATCTCAAACCGGATCAGTACATTAAGCAGGACAACGTGGACGCTTTTGCACAGTTGTACACGCCTTATATGTTGGGTTATGGGACGGCCGGGCTCAGCAGCGGCAAGGCCGGGTGGACGCTGTACGAGTGCGTGGACTGCGGCAATAAGTACAAGCACAAGGGCTCCTTGCAGAGACACATAAAGTACGAGTGTAGGAAACAGCCGAGTTTCAAGTGCCCTTATTGCGTCTACCGAGCCTATCAGAAGCACAACCTGTTGCTCCACGAGCGACATCTCCACAAAGATATGCCCGAGAAGGTGGATTTCGTGTCGGAATGA
Protein
MDDDQQFCLRWNNHQSTLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHPIIILKDVKYAELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNKPSRPPSRPQPTAPAPAVPATAPPAPPAPLVPPLAARTASPAPLGRDASPDSREGSLSPSRRRKKARRGSGAAHNGASPPPPPAPLKDELSRADTLEDLTLDDEHHDDAPPPSHNDVVRNFQWHMERSQDEIMNSSDNAREQQGRKPTTPRQSIVTRSKKVMEESGATTLAILKNVKSPPAPSPPPAGAPPGAVCPPSAAACPSPADLGKENAARPAAPNPPPAPPAAPADSRYNIFPRADRVSLPCAQYKTDKGYKCPNCQRCYNARKNLVRHVTLECGRDPQYKADVFAEAGKALPPALLSLLSVQRALQLEYDDTDDIVLSDEPPPAEPARQFECRHCGKRYRWKSTLRRHENVECGGKAPAHQCPHCAYRAKQRGNLGVHIRKHHTAEWCLVGRRECVVPASERVAVSGSTGGGEDVSFSRIGGLSWEQWSARLALPLVAGVAGVAGLRTPDPGFACPDCGRLYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIARHMERMHRDLHLKPDQYIKQDNVDAFAQLYTPYMLGYGTAGLSSGKAGWTLYECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLHKDMPEKVDFVSE
Summary
Uniprot
ProteinModelPortal
PDB
4HXI
E-value=1.11675e-09,
Score=154
Ontologies
GO
Topology
Length:
738
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05133
Exp number, first 60 AAs:
0.00053
Total prob of N-in:
0.00023
outside
1 - 738
Population Genetic Test Statistics
Pi
2.354254
Theta
4.535355
Tajima's D
-1.009458
CLR
2.300181
CSRT
0.129243537823109
Interpretation
Uncertain
