Gene

KWMTBOMO06919

Pre Gene Modal

BGIBMGA014473

Annotation

cytochrome_c_oxidase_assembly_protein_cox11_[Danaus_plexippus]

Location

Bomo_Chr11(-):19718971-19721655      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.413 Extracellular   Reliability : 1.206

CDS

ATGACAGTAGGCCTCAGTTACGCAGCAGTGCCTCTATACAGGATATTTTGTCAGGCTTACAGCTATGGAGGCACAACAGGACAAATTGAAGCAAATAAAGCAGTTAGTAACATGAAAGCCATCAAAGATAGGCCCATAAAGGTCAGATTTAATGCAGATACAGCTTCTTCAATGCAATGGAACTTTAAACCTCAACAACCTGATATCACAGTATTACCAGGTGAAACTGCACTAGCATTTTATACAGCAGTCAATCCGACTGATAAAGCAGTGACTGGGATCAGTACATACAATGTAATTCCATTTGAAGCTGGTCAGTATTTTAACAAAATACAGTGCTTTTGTTTTGAAGAACAACAACTAAATCCACATGAACAGGTGGATATGCCAGTATTTTTTTACATTGACCCAGAGTATATAGAAGATCCCAAAATGGAGTTTATAGACGAGATTGTGTTGTCATATACATTCTTTGAAGCTAAGGAAGGCATGAAGTTACCTGTGCCATCATATGTGAAGCAATGA

Protein

MTVGLSYAAVPLYRIFCQAYSYGGTTGQIEANKAVSNMKAIKDRPIKVRFNADTASSMQWNFKPQQPDITVLPGETALAFYTAVNPTDKAVTGISTYNVIPFEAGQYFNKIQCFCFEEQQLNPHEQVDMPVFFYIDPEYIEDPKMEFIDEIVLSYTFFEAKEGMKLPVPSYVKQ

Uniprot

H9JY55   A0A3S2TP52   A0A2W1BYH1   A0A2A4K6L2   A0A1E1WE78   A0A2H1V4J2   + More
A0A212FLV1   A0A194QQ04   A0A194Q9I5   S4NY80   A0A2R7VWH9   A0A0P4VI37   D6WEX2   A0A158NT83   E2BJD6   E9INW1   A0A195E3S4   A0A067QS33   F4WH39   A0A2P8XCP4   A0A195CRX8   U5EF77   A0A182H9U4   E2A593   A0A026WZZ7   A0A1I8P5T0   A0A2M3ZCP3   A0A0T6AZL4   Q174W6   A0A182SW31   A0A182J665   A0A1I8M5D6   A0A1Y1NDK8   A0A1B6DKL7   A0A1B6C362   A0A1L8DZQ5   A0A2M4BYJ5   N6U5Y3   A0A1W4WPS2   A0A182K4N8   J3JUV3   A0A182PI41   A0A1A9X0F6   A0A182X857   A0A1B0BC68   A0A084W1T4   A0A1A9YGZ9   A0A182UZ55   A0A2M4AYN1   A0A182FM49   A0A182LNA8   Q7QDV7   A0A182HXA6   A0A182W3T9   W5JAY2   A0A182RBB8   K7IPK6   A0A182YIQ0   A0A232EPP3   A0A0A9YLS0   B0X7E6   A0A0L0BPZ8   A0A154PQY4   W8BWP1   A0A151WZW9   A0A0K8SXE8   A0A1A9UQK8   A0A3B0JII6   A0A0Q5W956   A0A1B0F9W9   A0A0R1DL97   A0A1Q3FI30   A0A182NDM2   A0A1W4UVR8   A0A034WBH2   Q9VMQ6   I5AMM9   A0A0Q9WQW6   A0A1A9ZTZ4   B4Q3M5   A0A1J1IZJ3   A0A0Q9WLH2   A0A0P8XEC2   A0A2T7PZB6   T1JEH7   A0A2A3E1W2   A0A088AP38   A0A1B6HKR3   A0A0Q9X5T4   A0A1B6EVV3   A0A1B0CEG9   A0A0M3QU65   A0A336ML92   A0A218UVJ3   A0A0L7R0H3   A0A2S2QL66   A0A2D0SAF3   J9JMB8   A0A3Q3EHC0   A0A3Q3GYQ9  

Pubmed

19121390    28756777    22118469    26354079    23622113    27129103    + More
18362917    19820115    21347285    20798317    21282665    24845553    21719571    29403074    26483478    24508170    30249741    17510324    25315136    28004739    23537049    22516182    24438588    20966253    12364791    14747013    17210077    20920257    23761445    20075255    25244985    28648823    25401762    26823975    26108605    24495485    17994087    17550304    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    22936249   

EMBL

BABH01042259    BABH01042260    RSAL01000034    RVE51381.1    KZ149906    PZC78287.1    + More
NWSH01000092    PCG79656.1    GDQN01005893    JAT85161.1    ODYU01000452    SOQ35272.1    AGBW02007696    OWR54711.1    KQ461185    KPJ07439.1    KQ459252    KPJ02177.1    GAIX01013905    JAA78655.1    KK854123    PTY11689.1    GDKW01003148    JAI53447.1    KQ971318    EFA00450.1    ADTU01025716    GL448558    EFN84286.1    GL764397    EFZ17766.1    KQ979701    KYN19572.1    KK852999    KDR12674.1    GL888148    EGI66518.1    PYGN01016841    PYGN01002997    PSN28986.1    PSN29760.1    KQ977329    KYN03456.1    GANO01003984    JAB55887.1    JXUM01004840    KQ560182    KXJ83963.1    GL436894    EFN71398.1    KK107061    QOIP01000014    EZA61331.1    RLU14983.1    GGFM01005522    MBW26273.1    LJIG01022533    KRT80071.1    CH477405    EAT41598.1    GEZM01005717    JAV95973.1    GEDC01011103    JAS26195.1    GEDC01029653    JAS07645.1    GFDF01002114    JAV11970.1    GGFJ01008989    MBW58130.1    APGK01041367    KB740993    KB632256    ENN76046.1    ERL90734.1    BT127018    AEE61980.1    JXJN01011858    ATLV01019446    KE525270    KFB44178.1    GGFK01012559    MBW45880.1    AAAB01008849    EAA07179.3    APCN01005167    ADMH02001758    ETN61161.1    NNAY01002918    OXU20311.1    GBHO01009587    GDHC01019903    GDHC01000055    JAG34017.1    JAP98725.1    JAQ18574.1    DS232448    EDS41896.1    JRES01001542    KNC22160.1    KQ435007    KZC13688.1    GAMC01002903    JAC03653.1    KQ982636    KYQ53307.1    GBRD01008271    JAG57550.1    OUUW01000006    SPP82177.1    CH954177    KQS70183.1    CCAG010008448    CM000157    KRJ98101.1    GFDL01007856    JAV27189.1    GAKP01007824    JAC51128.1    AE014134    BT011370    AAF52256.2    AAR96162.1    CH379058    EIM52214.1    CH963857    KRF98361.1    CM000361    CM002910    EDX03829.1    KMY88308.1    CVRI01000064    CRL05567.1    CH940649    KRF81999.1    CH902620    KPU73183.1    PZQS01000001    PVD38764.1    JH432117    KZ288483    PBC25246.1    GECU01032439    JAS75267.1    CH933807    KRG03547.1    GECZ01027700    JAS42069.1    AJWK01008866    CP012523    ALC40123.1    UFQS01000042    UFQT01000042    UFQT01001386    SSW98316.1    SSX30321.1    MUZQ01000120    OWK57658.1    KQ414670    KOC64344.1    GGMS01009293    MBY78496.1    ABLF02039268   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053240    UP000053268    + More
UP000007266    UP000005205    UP000008237    UP000078492    UP000027135    UP000007755    UP000245037    UP000078542    UP000069940    UP000249989    UP000000311    UP000053097    UP000279307    UP000095300    UP000008820    UP000075901    UP000075880    UP000095301    UP000019118    UP000030742    UP000192223    UP000075881    UP000075885    UP000091820    UP000076407    UP000092460    UP000030765    UP000092443    UP000075903    UP000069272    UP000075882    UP000007062    UP000075840    UP000075920    UP000000673    UP000075900    UP000002358    UP000076408    UP000215335    UP000002320    UP000037069    UP000076502    UP000075809    UP000078200    UP000268350    UP000008711    UP000092444    UP000002282    UP000075884    UP000192221    UP000000803    UP000001819    UP000007798    UP000092445    UP000000304    UP000183832    UP000008792    UP000007801    UP000245119    UP000242457    UP000005203    UP000009192    UP000092461    UP000092553    UP000197619    UP000053825    UP000221080    UP000007819    UP000261660   

PRIDE

H9JY55    Q9VMQ6   

Pfam

PF04442   CtaG_Cox11

Interpro

IPR023471   CtaG/Cox11_dom_sf        + More
IPR007533   Cyt_c_oxidase_assmbl_CtaG       

SUPFAM

SSF110111   SSF110111       

Gene 3D

2.60.370.10    

ProteinModelPortal

H9JY55   A0A3S2TP52   A0A2W1BYH1   A0A2A4K6L2   A0A1E1WE78   A0A2H1V4J2   + More
A0A212FLV1   A0A194QQ04   A0A194Q9I5   S4NY80   A0A2R7VWH9   A0A0P4VI37   D6WEX2   A0A158NT83   E2BJD6   E9INW1   A0A195E3S4   A0A067QS33   F4WH39   A0A2P8XCP4   A0A195CRX8   U5EF77   A0A182H9U4   E2A593   A0A026WZZ7   A0A1I8P5T0   A0A2M3ZCP3   A0A0T6AZL4   Q174W6   A0A182SW31   A0A182J665   A0A1I8M5D6   A0A1Y1NDK8   A0A1B6DKL7   A0A1B6C362   A0A1L8DZQ5   A0A2M4BYJ5   N6U5Y3   A0A1W4WPS2   A0A182K4N8   J3JUV3   A0A182PI41   A0A1A9X0F6   A0A182X857   A0A1B0BC68   A0A084W1T4   A0A1A9YGZ9   A0A182UZ55   A0A2M4AYN1   A0A182FM49   A0A182LNA8   Q7QDV7   A0A182HXA6   A0A182W3T9   W5JAY2   A0A182RBB8   K7IPK6   A0A182YIQ0   A0A232EPP3   A0A0A9YLS0   B0X7E6   A0A0L0BPZ8   A0A154PQY4   W8BWP1   A0A151WZW9   A0A0K8SXE8   A0A1A9UQK8   A0A3B0JII6   A0A0Q5W956   A0A1B0F9W9   A0A0R1DL97   A0A1Q3FI30   A0A182NDM2   A0A1W4UVR8   A0A034WBH2   Q9VMQ6   I5AMM9   A0A0Q9WQW6   A0A1A9ZTZ4   B4Q3M5   A0A1J1IZJ3   A0A0Q9WLH2   A0A0P8XEC2   A0A2T7PZB6   T1JEH7   A0A2A3E1W2   A0A088AP38   A0A1B6HKR3   A0A0Q9X5T4   A0A1B6EVV3   A0A1B0CEG9   A0A0M3QU65   A0A336ML92   A0A218UVJ3   A0A0L7R0H3   A0A2S2QL66   A0A2D0SAF3   J9JMB8   A0A3Q3EHC0   A0A3Q3GYQ9  

PDB

1SP0     E-value=2.0558e-29,     Score=317

KEGG

101745310    K02258 cytochrome c oxidase assembly protein subunit 11 | (RefSeq) cytochrome c oxidase assembly pro

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005507   GO:0016021   GO:0008535   GO:0009060   GO:0004523   GO:0030833   GO:0005515   GO:0043565   GO:0043401   GO:0006418   GO:0016020   GO:0005634   GO:0006260  

Length:

174

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18292

Exp number, first 60 AAs:

0.17672

Total prob of N-in:

0.08762

outside

1  -  174

 

 

Pi

19.964463

Theta

4.494

Tajima's D

0.833615

CLR

0.825432

CSRT

0.64016799160042

Interpretation

Uncertain