Gene

KWMTBOMO06913  Validated by peptides from experiments

Annotation

hypothetical_protein_KGM_10332_[Danaus_plexippus]

Location

Bomo_Chr11(-):19665795-19671605      View in EpiBrowser

Full name

Cytochrome c oxidase subunit      

Location in the cell

Mitochondrial   Reliability : 1.947

CDS

ATGCCTGAGATGATCAAATCGCCCGCCGACCTCAAAACAGCACCTTTCGACCCACGGTTCCCTAACCAAAATCAGACGAGGCACTGCTACCAAAGTTACGTGGACTTCCACCGTTGCCAGAAAGTTCGCGGCGAAAAATACGAACCATGCTACTATTTCAAGAGAGTGTACAGGTCTCTCTGCCCCAATGAGTGGGTCGACAAGTGGGACAACCAGCGCGCCGAAGGCACCTTCGCCGGTAGGATTTAG

Protein

MPEMIKSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI

Description

This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

Similarity

Belongs to the cytochrome c oxidase subunit 6B.

Uniprot

A0A212FLW3   I4DJI4   A0A2W1BZJ4   A0A2H1V360   S4PH49   A0A194QR47   + More
U5ES37   A0A1L8E133   A0A2T7PZR6   A0A0K8TNL2   D3TRS8   D1FQ23   A0A0A9YQ11   R4WCY5   A0A146M827   A0A0C9QY58   A0A034VUL5   A0A023FAX1   A0A026WFG7   A0A1X9PXB8   R4G3W6   B4L6V0   A0A023FH72   A0A1B0G4I4   A0A023GEB9   G3MPU9   B4R7T3   B4I7B5   B3NVT6   Q8IQW2   B4PZ05   K7IXT2   A0A1A9ZK02   A0A1A9VS13   W5JDB1   B4MVI5   A0A1A9X5D3   A0A1B0BQS5   A0A139WLP1   A0A2M4A8W1   A0A3B0KMN3   Q6XHZ3   A0A0R3P0E8   B4MA25   A0A1V9X6H3   A0A1A9XX34   A0A182V5R8   A0A182LKV3   F5HLX5   A0A3B0KWY8   B5DN29   B4H0M7   A0A1W4VUU2   N6T0L8   A0A1E1X0T5   A0A232F1Q9   U5EVQ3   A0A182PPG8   B3MQM5   A0A0C9S9V7   B4JWT7   C1C592   A0A059NU00   Q9VWD1   A2TE06   A0A023JPC3   A0A023JMT6   A0A0M3QZT8   B4NQ74   A0A023ECB1   A0A069DNJ0   A0A224Y4B4   A0A1W4VU39   A0A0J7KU10   A0A2M3YZR3   A0A182FDX6   Q16XG8   A0A1I8NCV0   A0A182WC19   A0A162Q859   A0A023FSR5   A0A023EEA8   A0A182JUF5   A0A0L0CIY8   A0A0P5AHS1   A0A1W4WNB6   A0A0L8GRC5   Q06DG6   A0A1L8E9D8   A0A1L8EGW0   A0A182NJ21   A0A1I8PX42   A0A182X918   A0A0P5T7J8   A0A0P5ET43   A0A0P5GA84   E9G6X0   A0A023EBN5   A0A084VA26   A0A0N8CE73  

Pubmed

22118469    22651552    26354079    28756777    23622113    26369729    + More
20353571    25401762    23691247    26823975    25348373    25474469    24508170    30249741    17994087    22216098    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    20075255    20920257    23761445    18362917    19820115    14525923    15632085    28327890    20966253    12364791    14747013    17210077    23537049    28503490    28648823    26131772    17598752    24945155    26334808    17510324    25315136    26108605    17244545    21292972    24438588   

EMBL

AGBW02007696    OWR54717.1    AK401452    KQ459252    BAM18074.1    KPJ02171.1    + More
KZ149906    PZC78280.1    ODYU01000452    SOQ35267.1    GAIX01005920    JAA86640.1    KQ461185    KPJ07445.1    GANO01003431    JAB56440.1    GFDF01001646    JAV12438.1    PZQS01000001    PVD38890.1    GDAI01001621    JAI15982.1    EZ424130    ADD20406.1    EZ419923    ACZ28278.1    GBHO01034115    GBHO01034114    GBHO01008507    JAG09489.1    JAG09490.1    JAG35097.1    AK417263    BAN20478.1    GDHC01005411    GDHC01002725    JAQ13218.1    JAQ15904.1    GBYB01008704    JAG78471.1    GAKP01013759    JAC45193.1    GBBI01000222    JAC18490.1    KK107238    QOIP01000007    EZA54668.1    RLU20768.1    KY406170    ARO92230.1    ACPB03006873    ACPB03006874    GAHY01001860    JAA75650.1    CH933812    EDW06096.1    GBBK01004485    GBBK01004484    JAC19998.1    CCAG010020456    GBBM01003224    JAC32194.1    JO843900    AEO35517.1    CM000366    EDX18416.1    CH480823    EDW56213.1    CH954180    EDV46751.1    AE014298    BT058032    BT072997    AAN09513.1    AAN09514.1    ACM16752.1    ACO06074.1    CM000162    EDX02083.1    ADMH02001489    ETN62337.1    CH963857    EDW75705.1    JXJN01018759    KQ971318    KYB28968.1    GGFK01003884    MBW37205.1    OUUW01000038    SPP89890.1    AY231955    AY232039    AAR10062.1    CH379064    KRT06698.1    CH940655    EDW66084.1    KRF82551.1    MNPL01022114    OQR69097.1    AAAB01008960    EGK97286.1    SPP89891.1    EDY72836.1    CH479200    EDW29822.1    APGK01049750    KB741156    KB631941    ENN73614.1    ERL87380.1    GFAC01006308    JAT92880.1    NNAY01001235    OXU24655.1    GANO01003306    JAB56565.1    CH902621    EDV44651.1    KPU81664.1    GBZX01002958    JAG89782.1    CH916376    EDV95213.1    BT082021    ACO72858.1    KF863578    AHL43318.1    AAF49015.2    EF189562    EF189563    EF189564    EF189565    EF189566    EF189567    EF189568    EF189569    ABM88340.1    ABM88341.1    ABM88342.1    ABM88343.1    ABM88344.1    ABM88345.1    ABM88346.1    ABM88347.1    KF863546    KF863547    KF863548    KF863549    KF863550    KF863551    KF863552    KF863553    KF863554    KF863555    KF863556    KF863557    KF863558    KF863559    KF863560    KF863561    AHL43286.1    AHL43287.1    AHL43288.1    AHL43289.1    AHL43290.1    AHL43291.1    AHL43292.1    AHL43293.1    AHL43294.1    AHL43295.1    AHL43296.1    AHL43297.1    AHL43298.1    AHL43299.1    AHL43300.1    AHL43301.1    KF863562    KF863563    KF863564    KF863565    KF863566    KF863567    KF863568    KF863569    KF863570    KF863571    KF863572    KF863573    KF863574    KF863575    KF863576    KF863577    AHL43302.1    AHL43303.1    AHL43304.1    AHL43305.1    AHL43306.1    AHL43307.1    AHL43308.1    AHL43309.1    AHL43310.1    AHL43311.1    AHL43312.1    AHL43313.1    AHL43314.1    AHL43315.1    AHL43316.1    AHL43317.1    CP012528    ALC49949.1    CH964291    EDW86299.1    GAPW01006655    JAC06943.1    GBGD01003658    JAC85231.1    GFTR01001085    JAW15341.1    LBMM01003207    KMQ93808.1    GGFM01000994    MBW21745.1    CH477539    EAT39299.1    LRGB01000389    KZS19447.1    GBBL01002424    JAC24896.1    GAPW01006654    JAC06944.1    JRES01000333    KNC32216.1    GDIP01199357    JAJ24045.1    KQ420777    KOF79384.1    DQ910359    ABI83781.1    GFDG01003399    JAV15400.1    GFDG01000943    JAV17856.1    GDIP01134214    JAL69500.1    GDIQ01268329    JAJ83395.1    GDIQ01243968    JAK07757.1    GL732534    EFX84358.1    GAPW01006711    GAPW01006710    GAPW01006709    GAPW01006708    GEHC01000223    JAC06888.1    JAV47422.1    ATLV01001350    KE523960    KFB34820.1    GDIP01140463    JAL63251.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000245119    UP000053097    UP000279307    + More
UP000015103    UP000009192    UP000092444    UP000000304    UP000001292    UP000008711    UP000000803    UP000002282    UP000002358    UP000092445    UP000078200    UP000000673    UP000007798    UP000091820    UP000092460    UP000007266    UP000268350    UP000001819    UP000008792    UP000192247    UP000092443    UP000075903    UP000075882    UP000007062    UP000008744    UP000192221    UP000019118    UP000030742    UP000215335    UP000075885    UP000007801    UP000001070    UP000092553    UP000036403    UP000069272    UP000008820    UP000095301    UP000075920    UP000076858    UP000075881    UP000037069    UP000192223    UP000053454    UP000075884    UP000095300    UP000000305    UP000030765   

PRIDE

C1C592    Q9VWD1   

Pfam

PF02297   COX6B

Interpro

IPR003213   Cyt_c_oxidase_su6B        + More
IPR036549   Cyt_c_oxidase_su6B_sf       
IPR036259   MFS_trans_sf       
IPR039672   MFS_2       
IPR038838   TRIR       

SUPFAM

SSF47694   SSF47694        + More
SSF103473   SSF103473       

Gene 3D

1.10.10.140    

CDD

cd00926  Cyt_c_Oxidase_VIb

ProteinModelPortal

A0A212FLW3   I4DJI4   A0A2W1BZJ4   A0A2H1V360   S4PH49   A0A194QR47   + More
U5ES37   A0A1L8E133   A0A2T7PZR6   A0A0K8TNL2   D3TRS8   D1FQ23   A0A0A9YQ11   R4WCY5   A0A146M827   A0A0C9QY58   A0A034VUL5   A0A023FAX1   A0A026WFG7   A0A1X9PXB8   R4G3W6   B4L6V0   A0A023FH72   A0A1B0G4I4   A0A023GEB9   G3MPU9   B4R7T3   B4I7B5   B3NVT6   Q8IQW2   B4PZ05   K7IXT2   A0A1A9ZK02   A0A1A9VS13   W5JDB1   B4MVI5   A0A1A9X5D3   A0A1B0BQS5   A0A139WLP1   A0A2M4A8W1   A0A3B0KMN3   Q6XHZ3   A0A0R3P0E8   B4MA25   A0A1V9X6H3   A0A1A9XX34   A0A182V5R8   A0A182LKV3   F5HLX5   A0A3B0KWY8   B5DN29   B4H0M7   A0A1W4VUU2   N6T0L8   A0A1E1X0T5   A0A232F1Q9   U5EVQ3   A0A182PPG8   B3MQM5   A0A0C9S9V7   B4JWT7   C1C592   A0A059NU00   Q9VWD1   A2TE06   A0A023JPC3   A0A023JMT6   A0A0M3QZT8   B4NQ74   A0A023ECB1   A0A069DNJ0   A0A224Y4B4   A0A1W4VU39   A0A0J7KU10   A0A2M3YZR3   A0A182FDX6   Q16XG8   A0A1I8NCV0   A0A182WC19   A0A162Q859   A0A023FSR5   A0A023EEA8   A0A182JUF5   A0A0L0CIY8   A0A0P5AHS1   A0A1W4WNB6   A0A0L8GRC5   Q06DG6   A0A1L8E9D8   A0A1L8EGW0   A0A182NJ21   A0A1I8PX42   A0A182X918   A0A0P5T7J8   A0A0P5ET43   A0A0P5GA84   E9G6X0   A0A023EBN5   A0A084VA26   A0A0N8CE73  

PDB

5Z62     E-value=3.45056e-21,     Score=244

KEGG

NA   

GO

GO:0005739   GO:0008643   GO:0015293   GO:0016021   GO:0016491   GO:0008409   GO:0090503   GO:0008408   GO:0033617   GO:0005751   GO:0004129   GO:0030833   GO:0005515   GO:0043565   GO:0043401   GO:0006418   GO:0016020   GO:0005634   GO:0006260  

PANTHER

PTHR11387   PTHR11328   PTHR34753  

Length:

82

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.18787

outside

1  -  82

 

 

Pi

20.720634

Theta

5.284264

Tajima's D

0.770964

CLR

1.841608

CSRT

0.619119044047798

Interpretation

Uncertain