SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06908  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004647
Annotation
PREDICTED:_brefeldin_A-inhibited_guanine_nucleotide-exchange_protein_1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.914 PlasmaMembrane   Reliability : 1.753
 

Sequence

CDS
ATGCAAACCAATTTGAAAACTAAAGAGATGTTCATAGTAAGAGCTTTAGAGAAGATACTGACTGACAAGGACATAAAAAGGTCCTATCACAGCCAGTTGAAGAAATCTTGCGAAGTCGCATTAGACGAAATCAAAACTGAGCTAAAAAACGGTGGACAATCAGAAACTGCTGATAGTCCAACCTCAGGCACTCTTCCGCTACCCAAAAATGATTCTTCAAACATCATCACAGCAGAGAAATACTTTCTACCATTTGAGCTAGCATGTCAGAGCAAAGCATCTAGAATTGTTGTTACCGCCTTAGACTGTCTACAAAAATTAATAGCCTATGGACATCTCACTGGAAACATTCCTGATTCAACAACCCCTCGAAAACTGTTAATTGACAGAATAGTTGAAACGATTTGCAGTTGCTTCACTGGTCCTCAAACTGATGAAGGGGTTCAACTTCAAATAATTAAAGCTCTTCTTACTGTTATCACAAGTCAACATGTCGAGGTTCATGAAGGTACAGTGCTTCTTGCAGTCCGTACTTGTTACAACATCTATTTAGCAAGTAAAAATCTCATCAATCAGACAACAGCCAGAGCCACCTTGACCCAAATGCTGAACGTAATATTTACGAAAATGGAAAATCAAGCCCTTGAACCTGAAAATATCAGCCCTAGCACTGTATCCGAGATACATAAAATGCCCAATGGTACTGTTGTCTCAGATGAACCTCAAAACAATCAAGCCAGCGAAGAGATTAAGGAACCAGATTCACCGCAGGCTGAACAAATAGATGAAGTATTGGAAGCAAAGATAATTGCTAAGCAAATAGTCGATTCAGTTATTGACAATGCAATAGACATTGCCATAAAGAAAACAGTTGAAGAGCAAAACATTCCAGACAATAATGAAAATCCTTCGGATTCTCAAGACAGCTCTAGTGTTTCTCATGAAATAAATGGTCAAGTAAATTCCGAACCATCAATTACTCGAATACCGTCACAAGAAAGCGTTGACGTAGCATCTGAAAATGACAATTCAGTGACAGCAAAGTTCACTCATGTCCTTCAAAAAGACGCTTTCTTGGTTTTCAGAGCGCTTTGCAAACTATCTATGAAGCCATTGCCAGAAGGTACTCCCGATCCTAAATCCCATGAATTAAGATCTAAAATTTTATCCCTCCATTTACTACTTTCTATATTACAAAATGCCGGTCCAGTATTTAGAAATAACGAGATGTTTATCACCGCTATCAAGCAATATCTATGTGTTGCGTTATCTAAAAATGGAGTTAGTTCTGTACCCGAAGTATTTGAACTATCACTTGCGATATTCCTTGCTCTTTTACAAAACTTCAAGGTCCATTTAAAGAAGCAGGTTGAAGTCTTTTTCAAAGAAATTTTCATGAATATCTTGGAAACTTCGAGTTCGTCTTTTGAACATAAATGGATGGTTATTCAGGCTTTGACAAGGATCTGTGGTGATGCCCAAAGCGTTGTAGATATCTACGTAAATTACGACTGTGATTTATCAGCGGCAAACCTGTTCCAACGACTAGTAAACGATGTTTCGAAAATTGCTCAAGGTCGTCAGGCTCTGGAACTGGGAGCAACCCCAAACCAAGAAAAGTCCATGAGGATAAGAGGACTTGAATGCGAAAGAACTGTTAAAGAAGAAACAGATCATCATAGTATTAAGTCCCATGGAGGTTCAAGCCTTAGCTTAGTATCAACAGGATCGAGTAATATAGGAAACAGAGAAACTTTAGATTCGCCAGAACAGTTTGAAGTATTGAAACAACAGAAAGAAGTATGGGAGACCGGGATCGATCTTTTCAATAGAAAACCTAAGAAAGGTGTTGCATTTTTACAAGAACAAGGCTTACTGGGCACTTCTACTAAAGAAATTGCCGAGTGGCTCCTTACGGACGAAAGACTAGACAAAACATTTATCGGCGAGTACTTAGGAGAAAATGACGATCATTCCAAAGAAGTTATGTATTCATATGTTGATTCAATGGAATTCACCAACATGGATATTGTAGCCGCATTGAGACATTTCTTAGAAGGGTTCCGATTACCCGGAGAAGCACAGAAGATTGATCGCTTGATGGAGAAGTTCGCGTCACGCTATTGCGAATGTAATCCTACAAATACGCTATTTATGAGTGCAGACACAGTATACGTATTAGCATTTTCCATAATTATGCTAACTACCGATTTGCATTCGCCTCAAGTTAAAAATAAGATGACAAAGGAACAATACATTAAACTGAACAGTGGCATAAGTGATAACAATGATTTACCTCGTGAATATTTATCGCAGATCTATGACGAAATAGCCGGACACGAAATAAAAATGAAAAACACATCGAAGCCTGGGAAACACATGATCGCCAACGAAAAGAAACGTAAATTCATTTGGAACATGGAAATGGAACAGATCTCAACAGCCGCAAAGAATTTAATGGAATCTGTTTCGCACGTTCAAACTCCATTCACCACCGCGAAACACGTCGAGCACGTTCGTCCAATGTTTAAAATGGCTTGGACTCCATTCTTGGCGGCTTTCTCGGTGGGCCTTCAAGATTGCGATGACCCTGAAATCGCTGCATTATGCTTAGATGGCATTAGATGTGCTATTAGGATCGCATGTATATTCCATATGAGCCTAGAAAGAGACGCATACGTACAAGCTCTCGCACGTTTTACGCTGCTCACTGCTAACTCTCCGATCACAGAGATGAAGGCTAAAAACATCGACACAATAAAAACTCTGATAACGGTCGCTCACACCGACGGCAACTATTTGGGCTCGAGCTGGCTCGATGTAGTGAAATGCATTTCACAATTAGAATTAGCTCAGCTCATAGGAACTGGAGTGCGGCCTCAATTCCTATCTGGTTCCGGTATAAAACCACAACCCGATTCTTTGAAATTCAGCTTGATTGCTTTAGACCCGAGTGTCAAAGAACATATCGGTGAAACAAGCTCACAGAGTGTAGTAGTCGCCGTCGACAGAATATTCACCGGTTCCACCAGACTCGATGGTGACGCAATTGTCGATTTCGTGAAAGCATTGTGTCAGGTATCGCTTGATGAACTGAGCCACCCCAATAACCCTCGCATGTTTTCGTTGCAAAAAATAGTTGAAATTTCCTATTACAACATGGGCCGCATCAGACTGCAGTGGTCTCGAATATGGCAAGTTCTCGGTGACCATTTCAATAAAGTCGGTTGCAGTAGTAACGAAGATATCGCATTTTTCGCTGTGGATTCCTTAAGACAATTATCCATGAAATTTATAGAGAAAGGAGAGTTTGCCAATTTCAAGTTTCAGAAAGACTTTCTAAGACCTTTTGAGCACATAATGAAAAAAAATAGCTCACCAACTATAAGAGATATGGTAGTAAGATGTATTGCTCAGATGGTGAACTCGCAAGCGCCTAATATCAAATCAGGCTGGAAGAATATTTTCTCCGTGTTTCACTTAGCAGCAGGCGATCAGGACGAAGCAATTGTTGATCTGGCATTCCAGACAACCGGAAAAATTATATCTGAATTGTATGAAAAACAATTCTCAGCGATGATCGATTCGTTTCAAGATGCTGTAAAATGTTTATCGGAATTTGCCTGTAATGCAAAGTTCCCAGACACATCTATGGAAGCTATAAGGCTCGTGCGATCCTGTGCTACAGCGGTTGGTACATCGCCGCAGCTCTTTGCAGAACACGCGGGACTAGAGGGCGAACCTGGCGCTCCGGAAGAAGATAGAGTGTGGCTAAGGGGTTGGTTTCCTCTTCTATTTTCGTTGTCATGCGTCGTCAGCCGTTGCAAACTCGACGTCCGCACGCGTGGACTCACAGTCCTATTTGAAATTATTAAAACTCACGGCGATTCATTCCGTCCTCATTGGTGGAGAGATCTCTTTAATATACTTTTCAGAATATTTGACAATATGAAATTACCTGAACATCAATTGGAAAAAAACGAATGGATGACTACAACATGCAACCACGCGCTGTACGCAATCGTAGATGTTTTCACGCAGTATTTTGACATTCTTGGTTCTCTGTTGCTTGAACAATTGTACGCCCAGTTACATTGGTGTGTACAGCAAGACAACGAACAACTAGCGCGCTCTGGCACCAATTGCTTGGAAAATCTAGTCATATCCAACGGAAGTAAGTTCAACGAAGATACCTGGAGCAAGACGTGTCAGATAATGTTAGACATATTCAACAGTACTTTACCGACAACCTTGTTGACTTGGAAACCGGATGAAAGTGACGACAATGAAACACCTCACGTTCGTCACGGCATCCTGAAGAAGCCGCAAGTAGGTGACGAGGTAAAGTCTTCCAATCGCGTCTTCAACAGTTTGTTGATCAAATGCGTCGTGCAACTCGAATTAATTCAAACAATAGACAATATCGTTTTCTTTCCCGCCACGTCGAGGAAAGAAGACGCCGAAACGTTGGCTCTGGCCGCGGCCGAGTTGACTGGTAACGCCCCTGGGGCGGAGCAGGAATGCCAGCGGGAGGAGCAAGGCATGTACAGGCTGCTGAGCTCGCCACATCTGTTGCGCCTCGTGGAGTGTCTGATGTGCAGTCACCGATTTGCAAAAACCTTCAACACCAACAACGCGCAACGTAATGTCCTTTGGAAAGCTAATTTTAAAGGTTCCGTTAAACCTAACATGCTGAAACAAGAGACTCAGTCGTTAGCATGCGTTCTGCGAATACTGCTTAAGATGTACGGAGATGAGTCACGCCAAGATCACTGGCCGGCGGTACAGAAGAGCCTTATCACCATATGCTGCGAGGCTCTCGAGTACTTCGCAGGGGTAACGAGCGAAGCGCACAGAGATGCTTGGACTTCAATTCTGTTGTTGATCCTCACCAGAATACTTAAGATGCCGGACGAAAGATTCGCGGCGCACGTGTCCAGCTACTACCCGCTGCTGTGCGAGATCACGTGCTTCGACTTGAAGCCCGAACTGCGCTCGGTTCTCCGCAGAGTATTCATTAGGATCGGACCGGTCTTCAGAATCATCCCCACACAATGA
Protein
MQTNLKTKEMFIVRALEKILTDKDIKRSYHSQLKKSCEVALDEIKTELKNGGQSETADSPTSGTLPLPKNDSSNIITAEKYFLPFELACQSKASRIVVTALDCLQKLIAYGHLTGNIPDSTTPRKLLIDRIVETICSCFTGPQTDEGVQLQIIKALLTVITSQHVEVHEGTVLLAVRTCYNIYLASKNLINQTTARATLTQMLNVIFTKMENQALEPENISPSTVSEIHKMPNGTVVSDEPQNNQASEEIKEPDSPQAEQIDEVLEAKIIAKQIVDSVIDNAIDIAIKKTVEEQNIPDNNENPSDSQDSSSVSHEINGQVNSEPSITRIPSQESVDVASENDNSVTAKFTHVLQKDAFLVFRALCKLSMKPLPEGTPDPKSHELRSKILSLHLLLSILQNAGPVFRNNEMFITAIKQYLCVALSKNGVSSVPEVFELSLAIFLALLQNFKVHLKKQVEVFFKEIFMNILETSSSSFEHKWMVIQALTRICGDAQSVVDIYVNYDCDLSAANLFQRLVNDVSKIAQGRQALELGATPNQEKSMRIRGLECERTVKEETDHHSIKSHGGSSLSLVSTGSSNIGNRETLDSPEQFEVLKQQKEVWETGIDLFNRKPKKGVAFLQEQGLLGTSTKEIAEWLLTDERLDKTFIGEYLGENDDHSKEVMYSYVDSMEFTNMDIVAALRHFLEGFRLPGEAQKIDRLMEKFASRYCECNPTNTLFMSADTVYVLAFSIIMLTTDLHSPQVKNKMTKEQYIKLNSGISDNNDLPREYLSQIYDEIAGHEIKMKNTSKPGKHMIANEKKRKFIWNMEMEQISTAAKNLMESVSHVQTPFTTAKHVEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIAALCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLTANSPITEMKAKNIDTIKTLITVAHTDGNYLGSSWLDVVKCISQLELAQLIGTGVRPQFLSGSGIKPQPDSLKFSLIALDPSVKEHIGETSSQSVVVAVDRIFTGSTRLDGDAIVDFVKALCQVSLDELSHPNNPRMFSLQKIVEISYYNMGRIRLQWSRIWQVLGDHFNKVGCSSNEDIAFFAVDSLRQLSMKFIEKGEFANFKFQKDFLRPFEHIMKKNSSPTIRDMVVRCIAQMVNSQAPNIKSGWKNIFSVFHLAAGDQDEAIVDLAFQTTGKIISELYEKQFSAMIDSFQDAVKCLSEFACNAKFPDTSMEAIRLVRSCATAVGTSPQLFAEHAGLEGEPGAPEEDRVWLRGWFPLLFSLSCVVSRCKLDVRTRGLTVLFEIIKTHGDSFRPHWWRDLFNILFRIFDNMKLPEHQLEKNEWMTTTCNHALYAIVDVFTQYFDILGSLLLEQLYAQLHWCVQQDNEQLARSGTNCLENLVISNGSKFNEDTWSKTCQIMLDIFNSTLPTTLLTWKPDESDDNETPHVRHGILKKPQVGDEVKSSNRVFNSLLIKCVVQLELIQTIDNIVFFPATSRKEDAETLALAAAELTGNAPGAEQECQREEQGMYRLLSSPHLLRLVECLMCSHRFAKTFNTNNAQRNVLWKANFKGSVKPNMLKQETQSLACVLRILLKMYGDESRQDHWPAVQKSLITICCEALEYFAGVTSEAHRDAWTSILLLILTRILKMPDERFAAHVSSYYPLLCEITCFDLKPELRSVLRRVFIRIGPVFRIIPTQ

Summary

EMBL
GDQN01004433    JAT86621.1    ODYU01000452    SOQ35261.1    KQ461185    KPJ07454.1    + More
KQ459252    KPJ02165.1    KZ149906    PZC78274.1    JTDY01003110    KOB70132.1    NWSH01000092    PCG79665.1    BABH01040711    BABH01040712    PCG79664.1    AGBW02007696    OWR54723.1    GEZM01001383    JAV97897.1    GFDL01010474    JAV24571.1    GFDL01010495    JAV24550.1    GFDF01003613    JAV10471.1    GFDL01010450    JAV24595.1    GFDL01010488    JAV24557.1    GFDF01003612    JAV10472.1    KQ971334    EEZ99666.2    APGK01042943    KB741011    ENN75520.1    AXCM01000345    GFDF01003749    JAV10335.1    PYGN01000701    PSN42030.1    CH477960    EAT34779.1    AAAB01008984    UFQT01000758    SSX27026.1    APCN01003374    KB632341    ERL93003.1    DS235151    EEB12582.1    QOIP01000007    RLU20155.1    CH916368    EDW03207.1    CH940654    EDW57534.1    GL436217    EFN72227.1    CH933807    EDW13486.1    ADTU01003705    AE014134    AY122171    AAF53331.2    AAM52683.1    CH480818    EDW51674.1    GL450042    EFN81580.1    CM002910    KMY90157.1    LBMM01001119    KMQ96890.1    CH954177    EDV58641.1    AJVK01010497    CM000157    EDW88349.1    KZ288443    PBC25696.1    CH379061    EAL33309.2    OUUW01000010    SPP85456.1    CH902620    EDV32011.1    CH963920    EDW78041.1    DS231888    EDS43578.1    KK107238    EZA54583.1    KQ414618    KOC67913.1    KQ434857    KZC08824.1    CP012523    ALC39551.1    CH479195    EDW27323.1    KQ435798    KOX73316.1    JXUM01046582    KQ561483    KXJ78433.1    GDKW01000227    JAI56368.1    GBBI01005056    JAC13656.1    KQ771982    OAD52521.1    GGLE01000656    MBY04782.1    GDHC01012013    JAQ06616.1    JH430474    LJIG01022793    KRT78688.1    GFAC01005242    JAT93946.1    AJFE02110961    AJFE02110962    AJFE02110963    AJFE02110964    AJFE02110965    AJFE02110966    AJFE02110967    AJFE02110968    AJFE02110969    AKHW03005657    KYO25997.1    MUZQ01000013    OWK63409.1    GAMT01008777    GAMS01006087    GAMR01005199    GAMQ01005468    GAMP01000763    JAB03084.1    JAB17049.1    JAB28733.1    JAB36383.1    JAB51992.1    NDHI03003448    PNJ47784.1    QRBI01000104    RMC15310.1    EAA14874.4    ABQF01050802   
Pfam
PF09324   DUF1981        + More
PF16213   DCB
PF12783   Sec7_N
PF01369   Sec7
Interpro
IPR032629   DCB_dom        + More
IPR015403   Sec7_C       
IPR000904   Sec7_dom       
IPR016024   ARM-type_fold       
IPR032691   Sec7_N       
IPR023394   Sec7_C_sf       
IPR035999   Sec7_dom_sf       
IPR007110   Ig-like_dom       
SUPFAM
SSF48425   SSF48425        + More
SSF48371   SSF48371       
Gene 3D
PDB
5J5C     E-value=3.51395e-84,     Score=800

Ontologies

Topology

Length:
1685
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03741
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00094
outside
1  -  1685
 
 

Population Genetic Test Statistics

Pi
18.537993
Theta
3.708227
Tajima's D
0.376494
CLR
0.423433
CSRT
0.509274536273186
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 EVSSWSFHFRLIHHFKSDSADQQYLITSTARKILQGGGARRIQHTFPPLVFHAYRLAFVYKDLKDQVRPWAAVGCPEYLLPTYQILKLHLRSWSLRTAYVTGPLHQRLSSVRDVTKNAMTLIKASINRSSS 97.52 0.0
25044914 QIVDPIVTFSSIK 100.00 0.002
25044914 FIWESYCQCIEIIR 100.00 0.002
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