Silkworm Genome Informatics Database

Gene

KWMTBOMO06905

Annotation

hypothetical_protein_KGM_10290_[Danaus_plexippus]

Location

Bomo_Chr11(+):19491686-19562782 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.659

CDS

ATGAACCAGAAGTGTAAAGTGTGCGGCGAGCCAGCGGCCGGCTTCCATTTCGGTGCTTTCACGTGCGAGGGATGCAAGTCATTCTTCGGTCGTTCGTACAACAACCTGAACTCCATAACGGAGTGCAAGAACAACGGCGAGTGCGTCATCAACAAGAAGAACAGGACGGCGTGCAAGGCATGCCGCCTCCGCAAGTGTCTCATGGTGGGCATGTCCAAGTCCGGCTCCAGGTACGGTCGCCGCTCCAACTGGTTCAAGATCCACTGCCTCCTACAGGAACAACAACAGGCCGCACAATCCCACTCGCCACCTCGAGTACCGCAGTCGCCCCACCCGTTGGCGCCGCCATTCCCCCCACATTTGTTCCCCGGCCTGGCGAGACCGCGCACGAAAGAAGAACTAGCCTTGTTAGGACTGGAGGACTACAACAAACCGTGCTCAGGATCCCCAGACTCACACCGAAGCGGGTCTTCTCCGAAATCCGATGAGAAAGCACGCATCACATCTCGGCCTGTCGACAGAGCACTTACTCCGCCCCGGGAGTCTCTGTTCCAACTGCCTCTGGCGAATATCGCTTCCTTGCCCCATTTCCACCACTCGCCGTTCTTACCTCCGCCACCATTTAGTCCTTTTCCAACGAACCATCCTTTGCTGTTCCCTCCGGGACTCCACCCTATATACTCGCGACATTTACTGGACCACGCCGCATTTAGACAAGCCGCCGAGAACAACAATGACGTGAGGATCGACGACCACAACTCGGAGTCTTCGAAAAGATTCTTTTTGGACGAGATTTTGAAACATCAGAGATCTTCACAACCGACGCCTCAAGAAGAAGTTGTGTCTGAGTCTGAATTTGTGCCTACGCCTCCTACTGAACGACGGGCTTCCGAATCACCAATTCAGGAGAACCCCATGGACCTGTCAGTGAAATCTGACGGTCGGTCGAGTTCAGCCCGACGGCGGTCTGACGACAGCGAGATCATAGTTCCAGACAACGATGATAACGAGTCCGCAAGCGCAGGCGCCTCCGCCAGCGAAGAGGAGGACATGCCGTACTCTCAAATCAAGAGAATCAAACTTCACCCTTTAGATCTCACCACTAAAGTGTGA

Protein

MNQKCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSITECKNNGECVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAAQSHSPPRVPQSPHPLAPPFPPHLFPGLARPRTKEELALLGLEDYNKPCSGSPDSHRSGSSPKSDEKARITSRPVDRALTPPRESLFQLPLANIASLPHFHHSPFLPPPPFSPFPTNHPLLFPPGLHPIYSRHLLDHAAFRQAAENNNDVRIDDHNSESSKRFFLDEILKHQRSSQPTPQEEVVSESEFVPTPPTERRASESPIQENPMDLSVKSDGRSSSARRRSDDSEIIVPDNDDNESASAGASASEEEDMPYSQIKRIKLHPLDLTTKV

Uniprot

A0A2A4K5Y6 A0A2W1BT75 A0A2H1WFQ8 A0A194Q9I1 A0A194QV74 A0A212FLV5 + More
A0A0L7KIK2 A0A1S5UZQ9 B3GVU9 A0A088ABD9 A0A0J7L8G8

Pubmed

28756777 26354079 22118469 26227816 18362917 19820115 + More

EMBL

NWSH01000092 PCG79651.1 KZ149906 PZC78272.1 ODYU01008371 SOQ51903.1 + More
KQ459252 KPJ02163.1 KQ461185 KPJ07456.1 AGBW02007696 OWR54725.1 JTDY01009722 KOB62920.1 KX373881 AQN67840.1 FM163173 KQ971321 CAQ57531.1 EFA00547.2 LBMM01000274 KMR02175.1

Proteomes

UP000218220 UP000053268 UP000053240 UP000007151 UP000037510 UP000007266 + More
UP000005203 UP000036403

Pfam

PF00105 zf-C4

Interpro

IPR013088 Znf_NHR/GATA + More
IPR001628 Znf_hrmn_rcpt

Gene 3D

3.30.50.10

ProteinModelPortal

A0A2A4K5Y6 A0A2W1BT75 A0A2H1WFQ8 A0A194Q9I1 A0A194QV74 A0A212FLV5 + More
A0A0L7KIK2 A0A1S5UZQ9 B3GVU9 A0A088ABD9 A0A0J7L8G8

PDB

1HLZ E-value=8.02663e-17, Score=213

KEGG

101737864 K08706 nuclear receptor subfamily 0 group A | (RefSeq) protein embryonic gonad-like

GO

GO:0008270 GO:0003700 GO:0043565 GO:0005634 GO:0070491 GO:0006355 GO:0043401 GO:0006418 GO:0016020 GO:0006260

Subcellular location

Nucleus

Length:

370

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03841

Exp number, first 60 AAs:

0.03715

Total prob of N-in:

0.05604

outside

1 - 370

Pi

25.379203

Theta

25.109613

Tajima's D

0.195741

CLR

1.536703

CSRT

0.433728313584321

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics