SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06901
Annotation
PREDICTED:_protein_embryonic_gonad-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.862
 

Sequence

CDS
ATGCAAATTGCGTCCCGAAATATTGTTTCGTTCTTCGGGCGCACGTACAACAACCTGTCGTCGATCTCCGAGTGCAAGAACAACGGCGAGTGCGTCATCAACAAGAAGAACAGGACGGCGTGCAAGGCGTGCCGCTTACGGAAGTGCCTTCTAGTCGGAATGTCCAAGTCCGGCTCTCGGTACGGCAGGAGGTCCAACTGGTTCAAAATCCACTGCCTTCTCCAAGAGCAACAGCATCAACAGATGCAGCACATACAAAATAGAAAATCTCCACCGACTTTCAACACCTCCATGAATGCATCTTTCTTGCCCACAAACTTGCTTCCGGCTGCCGCCCTCGCAGAATATTACAAAAATTCAGAAAAGAATCCCTTCACAGAAGATGTGATGCGGCAGAGTGTTTCACCTTCAGATTCCGGAGCATCTTCCGCGGACCCTGAAGATGACAACAGTTCAAGAAGCACTAGCGGCTTGAGCATCTTCCGACCGGCATCGTCACCGCTGAGCGATAAAGATGTCAGATTACAGGCCATTAGGAATCAAAGTAAAGATGTCAAAAAACGAAAACCAGCCTTGCCCTCTCCGTTCAGTTCTATGTCAGCATCACCAAGCTTTTCACCGAGACCTTTCCTTCCAGTGATGCAAAGACCGATTCCACCGGCGGCCACCACGTGGTCGAACAGAAATGGTGGCGACTTGCTCCTACACTCGCCAGCCGTCGCGGGGGTGGCGATAGATCAAGACCAACCCATTGATCTATCCATCAAATCGACCGCAGTACTAATTAGGAGCCCCAAAAACGACGAAGTGAGCGACTCAGAGCCCGAACTGAGCATCGACTTGAGCGAATCAAGCAAAGACATGATGAAGAATCCTCTGGACCTTTCTCTTGTTCCCAAAAGGACTGAAGAGCTTCCATTAACTGGTTGA
Protein
MQIASRNIVSFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQHQQMQHIQNRKSPPTFNTSMNASFLPTNLLPAAALAEYYKNSEKNPFTEDVMRQSVSPSDSGASSADPEDDNSSRSTSGLSIFRPASSPLSDKDVRLQAIRNQSKDVKKRKPALPSPFSSMSASPSFSPRPFLPVMQRPIPPAATTWSNRNGGDLLLHSPAVAGVAIDQDQPIDLSIKSTAVLIRSPKNDEVSDSEPELSIDLSESSKDMMKNPLDLSLVPKRTEELPLTG

Summary

Pfam
PF00105   zf-C4
Interpro
IPR001628   Znf_hrmn_rcpt        + More
IPR013088   Znf_NHR/GATA       
Gene 3D
PDB
4OLN     E-value=1.44166e-06,     Score=123

Ontologies

Topology

Subcellular location
Nucleus  
Length:
309
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02275
Exp number, first 60 AAs:
0.00033
Total prob of N-in:
0.04869
outside
1  -  309
 
 

Population Genetic Test Statistics

Pi
7.398654
Theta
11.876032
Tajima's D
-0.846052
CLR
1.451295
CSRT
0.165141742912854
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号