SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06898
Annotation
PREDICTED:_uncharacterized_protein_LOC101742912_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.114
 

Sequence

CDS
ATGGACAATACTATCCCGAAAGACCTGGAAGTCAAAGTGGACAAACCGTCAACAGTAAGGCGGAGTATTGAAAATATTGAGGCAAGCCAGGAGGCAGCACAAATAGAAGTCCAACCCTCCCAAAAAAGGATCCAAGCGATCAAATCCAGCCAGAAGGAGGCAACCAGGAAAATAGACCTGGTTACGTCACCTCCAACAAGGGAGAAACACCCAACCCTGGCTCTTGAAGCTAAATCCTGTCTTTGCAAGGCGAAGACTTATCTGGCCAACTCCAGAAACCTGAGGACGGACATAAAGGACGGAGTCTTGAATACAATCGATAGACTGTACCAAATAGTCAAAACTTTGGATAAAGAATTGGAAAATCAAAAAAGAGGAAAGAAAGAGGAGGAGAAAGGAGTAGGGACGGGGTCAAGAAACATGCCTAAGGCGAGCACAACCAGGAAATGTAACACCAGGGACGTGAATTGGCTACCTTTTATTGAAAAGGCAACCCAATTCAAGAGGGACAAAAATCTTGACACTCAAAGATTGAAAATGACAAACACGGAGGAAGAACGAACGAATACCATAAACGAGTATGATGCAGTTGTGATCGAGGCGCACGAGGAGGTCTTCCCAAAAATAAAATGTAAAACAAATCCGAAGATTCCTTGGTGGACCAAAGAGTTGGAGGATAAGGAAAAGGAAACACTTACCTTAGAGTGGCGGGTCCGCTGCACGGAACCCTGCAGTAGGAGTGCCGCCGTAGCCGGGTATCTGGAACAAAAAGAGGACTGTGGAAATGATGTGAAGGGTGCTGAGAGAAGCAGTTGGATGGAGTTTGATTTTGTACAACGCGGCGCTGACATTATCGACAAGATCTTAGACAGAGTCGACGAGATCAAATTGGCTATTGACAAAACCGCCGCGAGCGTCAGGGTCTTGGTCTGCTCCCAGAGCACCCTCGCCGACATGCTCGATGGTATTGCCGGTGATGTCGCGTTAGCTAAAACTTCAATTGACGAAGTTGCTAAAGGTGTGGTCACATGCGAGCAAAGATTTATCTCCAGGCCGTATGCCAGCGTAGCCGCTACTAAGTCAGGGTACAGACCAGCACTTCACTCTGTGGTAGTCACCATTGAAGGAAACTGTTGA
Protein
MDNTIPKDLEVKVDKPSTVRRSIENIEASQEAAQIEVQPSQKRIQAIKSSQKEATRKIDLVTSPPTREKHPTLALEAKSCLCKAKTYLANSRNLRTDIKDGVLNTIDRLYQIVKTLDKELENQKRGKKEEEKGVGTGSRNMPKASTTRKCNTRDVNWLPFIEKATQFKRDKNLDTQRLKMTNTEEERTNTINEYDAVVIEAHEEVFPKIKCKTNPKIPWWTKELEDKEKETLTLEWRVRCTEPCSRSAAVAGYLEQKEDCGNDVKGAERSSWMEFDFVQRGADIIDKILDRVDEIKLAIDKTAASVRVLVCSQSTLADMLDGIAGDVALAKTSIDEVAKGVVTCEQRFISRPYASVAATKSGYRPALHSVVVTIEGNC

Summary

Uniprot
Pfam
PF06472   ABC_membrane_2
Interpro
IPR011527   ABC1_TM_dom        + More
IPR031241   ABCD3       
ProteinModelPortal

Ontologies

Topology

Length:
378
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00981
outside
1  -  378
 
 

Population Genetic Test Statistics

Pi
2.629995
Theta
10.458642
Tajima's D
-0.642559
CLR
13.254195
CSRT
0.214089295535223
Interpretation
Uncertain
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