Gene

KWMTBOMO06895  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012008

Annotation

hypothetical_protein_KGM_10310_[Danaus_plexippus]

Location

Bomo_Chr11(+):18922031-18927385      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.154 Nuclear   Reliability : 1.704

CDS

ATGAACTTGATTAAAAGAAGTATTGTTCATTGTAAAAAATGTCTAAAAGGAATTCACAGAAGTTTCAGCCAAAATTGTTGCGTAAAGAATGCGGCAAATGAAAATTCTCAAGTTGAAGAATGGCCACGACGTGTGGTCTCTGGAATCCAACCAACTGGTAGCCTGCATGTTGGGAACTACTTTGGTGCAATCAGACGCTGTGTGCGCTTGCAACAGCAAGGCAATGACTTAACACTGTTTATTGCTGACTTACACTCCTTAACTGCACAGCAGAACCCTGAAGTATTACAAAACAATATCTTGGAACTAACAGCATATTTATTAGCAAGCGGTATTGATCCAGAACAGAGCACATTCTTCGTTCAGTCCGCTGTTACAAGACATGCAGAGCTGTGCTGGCTGCTTGCATGTTTGGCTACTAATGCCAGATTGGCCCATCTACCCCAGTATAAAGAGAAGAGTGCTAAGATGAAGGAAGTGCCCATTGGATTATTGCTTTACCCAGTTTTACAGGCAGCTGACGTGTTGATTTACCGCGGTACCCACGTTCCTGTAGGCGCTGATCAGATACAACACCTGCAGGTTGCCTCGCAGTTGGTTAAGACCTTCCATCATAGATACGGAAAGACATTCCCAACACCGAGACCCCTATTGCCAGACGACGGTAGCGATAGAATACTGAGCCTAAGGGATCCAACAAAGAAAATGTCCAAATCGGATTCTGATCCGAAATCCAGGATCTTGCTGAGCGACACGGATGACGTTATTCACAAGAAAATTCGGAAAGCAGTCACAGATTTTACTCCACAGGTTACATATGATCCAAAAGAACGGCCCGGAGTATCAAATCTTATAAAACTACACTGCCTTGCTGAAGATAAACTCCCTGAAGAAGTAGTTGAAGAATCAGATGGTATGACAACGGCGCAGTATAAAGGTGTTGTTGCAAATGCTCTCTGTGAAGCCCTGCGGCCTGTACGGGAACGGGCAGTCAGTTTGCAAGCCCAGCCAGCCTTCCTGCAAGCTGTGCTGCAGCACGGCGCCGTCCGGGCTCGCCAGCGTGCAGATGAAGTCTATCAGGATGTCACAAACAAACTTGGGTTAGCAGTGCCACGATTACACAGTCTAACCAGAGCCGCCACTCAATGA

Protein

MNLIKRSIVHCKKCLKGIHRSFSQNCCVKNAANENSQVEEWPRRVVSGIQPTGSLHVGNYFGAIRRCVRLQQQGNDLTLFIADLHSLTAQQNPEVLQNNILELTAYLLASGIDPEQSTFFVQSAVTRHAELCWLLACLATNARLAHLPQYKEKSAKMKEVPIGLLLYPVLQAADVLIYRGTHVPVGADQIQHLQVASQLVKTFHHRYGKTFPTPRPLLPDDGSDRILSLRDPTKKMSKSDSDPKSRILLSDTDDVIHKKIRKAVTDFTPQVTYDPKERPGVSNLIKLHCLAEDKLPEEVVEESDGMTTAQYKGVVANALCEALRPVRERAVSLQAQPAFLQAVLQHGAVRARQRADEVYQDVTNKLGLAVPRLHSLTRAATQ

Similarity

Belongs to the class-I aminoacyl-tRNA synthetase family.

Uniprot

H9JR48   A0A212FLW9   A0A3S2TP45   A0A2W1BJG4   A0A194QPI1   A0A2H1WGB6   + More
B0X7D9   A0A1Q3F732   Q174W2   A0A1B0EX65   A0A1S4FEI3   A0A182NPR3   A0A182MGI9   A0A182K749   A0A1B6DU64   A0A2M4BRG0   A0A2M4AV48   A0A2M4BRB9   A0A1B0CS17   A0A182G0A6   A0A1L8DFR2   A0A2M4BSK5   A0A182YL32   A0A084VIM0   A0A182GWZ9   A0A2C9GQD2   A0A182Q0U9   A0A182VCG0   A0A182TKQ1   A0A182L4L7   A0A1W4X5F1   T1DRF9   A0A232FL39   A0A067RAV5   K7J475   A0A224XSN4   A0A0L0CK73   A0A0L7R0D3   E9J035   A0A182WEB7   A0A023F885   T1DQQ8   T1HZQ2   A0A0P4VQN6   R4G5Y4   T1JAT1   A0A158NB62   A0A182S085   W5JCS0   A0A0V0GAG3   A0A182P6W8   A0A182SYJ5   J9JPX7   E2ARE7   A0A026WQJ1   E9GVX8   A0A1J1IIC9   D6WMA7   A0A182X6Q0   A0A1I8N612   J3JY07   A0A1W4W4C0   Q8SZU2   A0A0M4EZM7   B4J059   B3M3U8   A0A0P5CHY6   T1PJ78   A0A164KFU3   A0A0P6DKE0   B3NDC2   A0A1W4X5B3   A0A2A3EQU5   A0A0P5D3H2   A0A336LWJ8   B4PJH8   A0A0P4YUY2   A0A0K8UDE4   A0A034VKR2   Q9VVL8   B4N4T4   A0A088ANW0   A0A1B6CYZ5   A0A0P6BZ56   W5MYQ0   B4QPB8   Q3YMW3   B4LIF1   A0A0P5FGA9   A0A3B0J4N7   A0A0A1WG87   B4HLB5   Q2LZ15   B4GZR8   A0A195BSS7   C3YIC1   A0A1Y1LB20   A0A195D6H6   W5MYQ9  

Pubmed

19121390    22118469    28756777    26354079    17510324    25244985    + More
24438588    26483478    20966253    28648823    24845553    20075255    26108605    21282665    25474469    27129103    21347285    20920257    23761445    20798317    24508170    30249741    21292972    18362917    19820115    25315136    22516182    17994087    17550304    25348373    10731132    12537568    12537572    12537573    12537574    15917496    16110336    17569856    17569867    26109357    26109356    22936249    25830018    15632085    18563158    28004739   

EMBL

BABH01039741    AGBW02007695    OWR54732.1    RSAL01000034    RVE51363.1    KZ150147    + More
PZC72880.1    KQ461185    KPJ07412.1    ODYU01008482    SOQ52118.1    DS232448    EDS41889.1    GFDL01011747    JAV23298.1    CH477405    EAT41602.1    AJVK01031329    AXCM01013263    GEDC01008095    JAS29203.1    GGFJ01006422    MBW55563.1    GGFK01011333    MBW44654.1    GGFJ01006421    MBW55562.1    AJWK01025563    GFDF01008867    JAV05217.1    GGFJ01006832    MBW55973.1    ATLV01013369    KE524854    KFB37814.1    JXUM01094416    KQ564127    KXJ72729.1    APCN01002389    AXCN02001663    GAMD01001944    JAA99646.1    NNAY01000080    OXU31168.1    KK852584    KDR20847.1    AAZX01003267    GFTR01005293    JAW11133.1    JRES01000296    KNC32656.1    KQ414670    KOC64324.1    GL767291    EFZ13831.1    GBBI01001230    JAC17482.1    GAMD01001020    JAB00571.1    ACPB03021503    GDKW01002439    JAI54156.1    GAHY01000115    JAA77395.1    JH432004    ADTU01010967    ADMH02001767    ETN61138.1    GECL01001073    JAP05051.1    ABLF02035743    GL442063    EFN63956.1    KK107128    QOIP01000006    EZA58290.1    RLU21623.1    GL732569    EFX76370.1    CVRI01000048    CRK98822.1    KQ971343    EFA03333.2    BT128130    AEE63091.1    AY070507    AAL47978.1    CP012525    ALC43870.1    CH916366    EDV97852.1    CH902618    EDV39282.1    GDIP01185943    JAJ37459.1    KA648857    AFP63486.1    LRGB01003325    KZS03226.1    GDIQ01077554    JAN17183.1    CH954178    EDV51915.1    KZ288193    PBC34060.1    GDIP01163343    JAJ60059.1    UFQT01000188    SSX21351.1    CM000159    EDW94666.1    GDIP01223284    JAJ00118.1    GDHF01027929    JAI24385.1    GAKP01015056    JAC43896.1    AE014296    DQ062762    BT044176    AAF49293.1    AAY56635.1    ACH92241.1    AGB94694.1    CH964095    EDW79158.1    GEDC01018631    JAS18667.1    GDIP01007347    JAM96368.1    AHAT01003663    AHAT01003664    CM000363    CM002912    EDX10912.1    KMZ00326.1    DQ062763    AAY56636.1    CH940647    EDW70738.2    GDIQ01255718    JAJ96006.1    OUUW01000002    SPP76495.1    GBXI01016879    JAC97412.1    CH480815    EDW41935.1    CH379069    EAL29694.3    CH479199    EDW29495.1    KQ976417    KYM89723.1    GG666514    EEN60258.1    GEZM01060842    JAV70859.1    KQ976760    KYN08500.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000002320    UP000008820    + More
UP000092462    UP000075884    UP000075883    UP000075881    UP000092461    UP000069272    UP000076408    UP000030765    UP000069940    UP000249989    UP000075840    UP000075886    UP000075903    UP000075902    UP000075882    UP000192223    UP000215335    UP000027135    UP000002358    UP000037069    UP000053825    UP000075920    UP000015103    UP000005205    UP000075900    UP000000673    UP000075885    UP000075901    UP000007819    UP000000311    UP000053097    UP000279307    UP000000305    UP000183832    UP000007266    UP000076407    UP000095301    UP000192221    UP000092553    UP000001070    UP000007801    UP000076858    UP000008711    UP000242457    UP000002282    UP000000803    UP000007798    UP000005203    UP000018468    UP000000304    UP000008792    UP000268350    UP000001292    UP000001819    UP000008744    UP000078540    UP000001554    UP000078542   

PRIDE

H9JR48    Q8SZU2    Q9VVL8   

Pfam

PF00579   tRNA-synt_1b        + More
PF00004   AAA
PF12796   Ank_2
PF02019   WIF

Interpro

IPR014729   Rossmann-like_a/b/a_fold        + More
IPR002305   aa-tRNA-synth_Ic       
IPR001412   aa-tRNA-synth_I_CS       
IPR024109   Trp-tRNA-ligase_bac-type       
IPR002306   Trp-tRNA-ligase       
IPR003593   AAA+_ATPase       
IPR000048   IQ_motif_EF-hand-BS       
IPR003959   ATPase_AAA_core       
IPR027417   P-loop_NTPase       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR038677   WIF_sf       
IPR003306   WIF       

SUPFAM

SSF52540   SSF52540        + More
SSF48403   SSF48403       

Gene 3D

3.40.50.620     1.25.40.20     2.60.40.2170    

CDD

cd00806  TrpRS_core
cd00204  ANK

ProteinModelPortal

H9JR48   A0A212FLW9   A0A3S2TP45   A0A2W1BJG4   A0A194QPI1   A0A2H1WGB6   + More
B0X7D9   A0A1Q3F732   Q174W2   A0A1B0EX65   A0A1S4FEI3   A0A182NPR3   A0A182MGI9   A0A182K749   A0A1B6DU64   A0A2M4BRG0   A0A2M4AV48   A0A2M4BRB9   A0A1B0CS17   A0A182G0A6   A0A1L8DFR2   A0A2M4BSK5   A0A182YL32   A0A084VIM0   A0A182GWZ9   A0A2C9GQD2   A0A182Q0U9   A0A182VCG0   A0A182TKQ1   A0A182L4L7   A0A1W4X5F1   T1DRF9   A0A232FL39   A0A067RAV5   K7J475   A0A224XSN4   A0A0L0CK73   A0A0L7R0D3   E9J035   A0A182WEB7   A0A023F885   T1DQQ8   T1HZQ2   A0A0P4VQN6   R4G5Y4   T1JAT1   A0A158NB62   A0A182S085   W5JCS0   A0A0V0GAG3   A0A182P6W8   A0A182SYJ5   J9JPX7   E2ARE7   A0A026WQJ1   E9GVX8   A0A1J1IIC9   D6WMA7   A0A182X6Q0   A0A1I8N612   J3JY07   A0A1W4W4C0   Q8SZU2   A0A0M4EZM7   B4J059   B3M3U8   A0A0P5CHY6   T1PJ78   A0A164KFU3   A0A0P6DKE0   B3NDC2   A0A1W4X5B3   A0A2A3EQU5   A0A0P5D3H2   A0A336LWJ8   B4PJH8   A0A0P4YUY2   A0A0K8UDE4   A0A034VKR2   Q9VVL8   B4N4T4   A0A088ANW0   A0A1B6CYZ5   A0A0P6BZ56   W5MYQ0   B4QPB8   Q3YMW3   B4LIF1   A0A0P5FGA9   A0A3B0J4N7   A0A0A1WG87   B4HLB5   Q2LZ15   B4GZR8   A0A195BSS7   C3YIC1   A0A1Y1LB20   A0A195D6H6   W5MYQ9  

PDB

5EKD     E-value=3.41171e-73,     Score=699

KEGG

101745867    K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] | (RefSeq) tryptophan--tRNA ligase, mitochondrial

PATHWAY

00970    Aminoacyl-tRNA biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0004830   GO:0005524   GO:0006436   GO:0006412   GO:0004812   GO:0005739   GO:0005759   GO:0070183   GO:0016021   GO:0005581   GO:0002040   GO:0000166   GO:0005737   GO:0006418   GO:0016020   GO:0005634   GO:0006260  

Length:

382

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13872

Exp number, first 60 AAs:

0.0021

Total prob of N-in:

0.02484

outside

1  -  382

 

 

Pi

24.531539

Theta

22.109374

Tajima's D

0.471247

CLR

0.905563

CSRT

0.510824458777061

Interpretation

Uncertain