Gene

KWMTBOMO06892  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012007

Annotation

PREDICTED:_F-box_only_protein_32_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr11(+):18877981-18906098      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.711 Nuclear   Reliability : 1.273

CDS

ATGCCTTTTATTTCAAAAGACTGGCGTTCACCGGGAGAGGAATGGGTGAAAACACAAGAAGGATGGGAAAAGAAGAAAGTGTTGGAGTGCACAGCGCAAAGATACGGTGATATAACTAACTTAAATAACCCGGAAGAAAACCAACAGAAATGGTCCGGTGATGGAGAAGAGGGAGACAAGAGTACAAATGAAGCTGTATCTAGGATACCACCGCACTGTCATATCACGATTAAATGTACTCGAGAAATCGCAGGTTTCAATGGCCTATCCGAAGCCGTCCGTCGTCTAGACTTCTCCTCGGCCGTCCGCGATGTTCGCCGCTTCAATTACATATGCGCTTTGTTGGAGCTATTGCTTCACGGGCAACGACTGACCCACCTGCCCGGGGCTGCTCAGAAACTCTTGCTGTCCATGCTGGAGCAGTTAGCCGACCAGGTGGCGCAGTCGCAACAAAACCTGAACGCTCTCCGCGCTCTGCTGAGCGGGGTGAGTGCGCTGCGCGAGGCCGAGCGGCGGTCATGCTGGGGCCGGCCGCTCGGCTCGAGGGCGCTGTGGGGGCACCACGACCACGCCATAGCCAGGATCCATCACATCGCCAGTGCCATACGTATACAAGAGCCCGGACCCGAGGTTGTGCCGAAACTTCACGATCTACCAGAGGAATGCATTCGGGACATCCTGTTGAGGTTAGCGGATCACAGGGATTTAGATGCAGCGTCGTCAGCATGGAGCGTTATGTCGTCAGTATGCTCGGAGCAGAGGATCTGGCGTGAACTGGTCAGCTTTCACTTCACGAACCAACAGATCGATGCGGCCGTCGCCAAGATCAAGGAGGACGATAAAGAAGTCGAGTGGAAGAAGATCTTCCATCACCTCAGGAAACTGTACGGGCTGCGCGAGGAGGCGCAGTTCGCGGAGACGCTGTCCCTGTGCCGCCACTGCCGCTGCCTTTTTTGGCGCTCGCTCGGACACCCCTGCATTGCCGACCAGTGCCCTGAATACCGCGAGCGCCTCAGAGAAGCTGGAGGACCGTTGCCCCCCTCTCCCGTACCCCCCGCAGCGTTCCTCAAATTCTTCTCGCTCTAA

Protein

MPFISKDWRSPGEEWVKTQEGWEKKKVLECTAQRYGDITNLNNPEENQQKWSGDGEEGDKSTNEAVSRIPPHCHITIKCTREIAGFNGLSEAVRRLDFSSAVRDVRRFNYICALLELLLHGQRLTHLPGAAQKLLLSMLEQLADQVAQSQQNLNALRALLSGVSALREAERRSCWGRPLGSRALWGHHDHAIARIHHIASAIRIQEPGPEVVPKLHDLPEECIRDILLRLADHRDLDAASSAWSVMSSVCSEQRIWRELVSFHFTNQQIDAAVAKIKEDDKEVEWKKIFHHLRKLYGLREEAQFAETLSLCRHCRCLFWRSLGHPCIADQCPEYRERLREAGGPLPPSPVPPAAFLKFFSL

Uniprot

A0A2A4J9E1   A0A1E1WUC0   A0A194QPM2   A0A212F803   H9JR47   A0A2H1V9X9   + More
A0A3S2L4M6   A0A0N1PJA4   A0A194Q9F3   A0A1I8JVV5   A0A2M4CSB2   A0A182TK32   A0A2C9GQU3   Q7PCP4   A0A182KT68   A0A182V5F3   A0A1Y1K669   A0A182MR97   A0A2M4ANT3   Q16VJ8   A0A182IZF3   A0A2M4BS88   A0A1Q3G2T0   A0A182Q136   A0A084WM63   D3TNJ6   A0A1A9ULK2   A0A1A9ZLT3   A0A1A9YGT3   A0A1B0BGL4   D6WER2   A0A0L0BKL4   J3JVY1   A0A0K8TPF9   A0A0T6AXT3   T1PDJ6   A0A1I8QCH1   A0A1B0FF40   A0A1Q3G2S7   A0A067R389   A0A2J7QBC5   A0A1B6D9G8   A0A1B6IR81   W5JS13   A0A182S5Q4   E0W101   A0A1B6BX49   A0A2P8YD78   A0A3B0JMR2   B4KUS6   A0A182WD57   B4LCR2   A0A0A1WDE8   A0A1W4VVF4   Q2LZ78   A0A182YC70   A0A0K8V898   A0A034VMC9   B4IZB9   W8BN15   B3M4B1   B3NGZ4   A0A182K2M6   B4HEX5   B4QQA0   Q9VTM4   B4PFN0   A0A1Q3G2E0   A0A182R1Z3   U5EV06   A0A0M4ERG7   A0A182FC20   A0A182P1H9   A0A336M916   X1WIE4   A0A2H8TT21   A0A2S2NFS4   A0A1A9WH58   A0A182U5D1   A0A1W7R8L4   A0A182MXF7   N6UDI7   U4UCC3   B4N4L8   K7J9J5   A0A151WV45   A0A0J7P293   E2ALK3   A0A154PP97   A0A0L7RAL5   T1I227   A0A3L8D3M1   A0A088AP91   A0A2A3EQV6   A0A151HZK4   A0A195EUW0   A0A195CS72   A0A195E369   T1IW22   A0A1W4VVA5  

Pubmed

26354079    22118469    19121390    12364791    14747013    17210077    + More
20966253    28004739    17510324    24438588    20353571    18362917    19820115    26108605    22516182    26369729    25315136    24845553    20920257    23761445    20566863    29403074    17994087    18057021    25830018    15632085    23185243    25244985    25348373    24495485    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    23537049    20075255    20798317    30249741   

EMBL

NWSH01002394    PCG68376.1    GDQN01000476    JAT90578.1    KQ461185    KPJ07483.1    + More
AGBW02009812    OWR49866.1    BABH01039741    BABH01039742    BABH01039743    BABH01039744    ODYU01001443    SOQ37653.1    RSAL01000157    RVE45593.1    LADJ01048591    KPJ21467.1    KQ459252    KPJ02133.1    GGFL01004054    MBW68232.1    APCN01003267    AAAB01008986    EAA00719.3    GEZM01096060    GEZM01096059    JAV55175.1    AXCM01003002    AXCM01003003    GGFK01008947    MBW42268.1    CH477589    EAT38598.1    GGFJ01006788    MBW55929.1    GFDL01000941    JAV34104.1    AXCN02001699    ATLV01024388    ATLV01024389    KE525351    KFB51307.1    EZ422998    ADD19274.1    JXJN01013888    KQ971326    EFA00885.2    JRES01001711    KNC20625.1    BT127399    AEE62361.1    GDAI01001823    JAI15780.1    LJIG01022553    KRT79964.1    KA646769    KA649811    AFP61398.1    CCAG010005762    GFDL01000920    JAV34125.1    KK852729    KDR17580.1    NEVH01016301    PNF25890.1    GEDC01027095    GEDC01024596    GEDC01014960    JAS10203.1    JAS12702.1    JAS22338.1    GECU01018264    JAS89442.1    ADMH02000596    ETN65715.1    DS235863    EEB19306.1    GEDC01031436    GEDC01021352    JAS05862.1    JAS15946.1    PYGN01000687    PSN42219.1    OUUW01000002    SPP76770.1    CH933809    EDW19332.1    CH940647    EDW70954.1    KRF85210.1    KRF85211.1    GBXI01017273    GBXI01015717    GBXI01009774    JAC97018.1    JAC98574.1    JAD04518.1    CH379069    EAL29630.1    KRT08214.1    KRT08215.1    KRT08216.1    GDHF01017160    GDHF01016996    GDHF01011445    JAI35154.1    JAI35318.1    JAI40869.1    GAKP01015987    GAKP01015986    JAC42965.1    CH916366    EDV96674.1    GAMC01015498    GAMC01015497    GAMC01015496    JAB91059.1    CH902618    EDV39381.2    CH954178    EDV51451.1    KQS43810.1    KQS43811.1    CH480815    EDW41144.1    CM000363    CM002912    EDX10118.1    KMY99051.1    AE014296    AY102690    AAF50023.1    AAM27519.1    CM000159    EDW94179.1    KRK01693.1    KRK01694.1    KRK01695.1    GFDL01001047    JAV33998.1    GANO01002089    JAB57782.1    CP012525    ALC45055.1    UFQT01000715    SSX26715.1    ABLF02025462    ABLF02025469    ABLF02025470    ABLF02025473    ABLF02058292    GFXV01005571    MBW17376.1    GGMR01003360    MBY15979.1    GEHC01000159    JAV47486.1    APGK01027033    KB740648    ENN79765.1    KB632292    ERL91589.1    CH964095    EDW79092.1    AAZX01002696    AAZX01008750    AAZX01012924    KQ982718    KYQ51706.1    LBMM01000327    KMR01213.1    KMR01217.1    GL440609    EFN65705.1    KQ435007    KZC13693.1    KQ414618    KOC67957.1    ACPB03006719    QOIP01000014    RLU14814.1    KZ288193    PBC34070.1    KQ976657    KYM78622.1    KQ981954    KYN32033.1    KQ977329    KYN03495.1    KQ979701    KYN19526.1    JH431604   

Proteomes

UP000218220    UP000053240    UP000007151    UP000005204    UP000283053    UP000053268    + More
UP000076407    UP000075902    UP000075840    UP000007062    UP000075882    UP000075903    UP000075883    UP000008820    UP000075880    UP000075886    UP000030765    UP000078200    UP000092445    UP000092443    UP000092460    UP000007266    UP000037069    UP000095301    UP000095300    UP000092444    UP000027135    UP000235965    UP000000673    UP000075901    UP000009046    UP000245037    UP000268350    UP000009192    UP000075920    UP000008792    UP000192221    UP000001819    UP000076408    UP000001070    UP000007801    UP000008711    UP000075881    UP000001292    UP000000304    UP000000803    UP000002282    UP000075900    UP000092553    UP000069272    UP000075885    UP000007819    UP000091820    UP000075884    UP000019118    UP000030742    UP000007798    UP000002358    UP000075809    UP000036403    UP000000311    UP000076502    UP000053825    UP000015103    UP000279307    UP000005203    UP000242457    UP000078540    UP000078541    UP000078542    UP000078492   

PRIDE

H9JR47    Q9VTM4   

Pfam

PF00076   RRM_1        + More
PF18694   TDP43_N
PF02230   Abhydrolase_2

Interpro

IPR036047   F-box-like_dom_sf        + More
IPR040394   FBX25/32       
IPR035979   RBD_domain_sf       
IPR041105   TDP43_N       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       
IPR001810   F-box_dom       
IPR003140   PLipase/COase/thioEstase       
IPR029058   AB_hydrolase       

SUPFAM

SSF81383   SSF81383        + More
SSF54928   SSF54928       
SSF53474   SSF53474       

Gene 3D

3.30.70.330     3.40.50.1820    

ProteinModelPortal

A0A2A4J9E1   A0A1E1WUC0   A0A194QPM2   A0A212F803   H9JR47   A0A2H1V9X9   + More
A0A3S2L4M6   A0A0N1PJA4   A0A194Q9F3   A0A1I8JVV5   A0A2M4CSB2   A0A182TK32   A0A2C9GQU3   Q7PCP4   A0A182KT68   A0A182V5F3   A0A1Y1K669   A0A182MR97   A0A2M4ANT3   Q16VJ8   A0A182IZF3   A0A2M4BS88   A0A1Q3G2T0   A0A182Q136   A0A084WM63   D3TNJ6   A0A1A9ULK2   A0A1A9ZLT3   A0A1A9YGT3   A0A1B0BGL4   D6WER2   A0A0L0BKL4   J3JVY1   A0A0K8TPF9   A0A0T6AXT3   T1PDJ6   A0A1I8QCH1   A0A1B0FF40   A0A1Q3G2S7   A0A067R389   A0A2J7QBC5   A0A1B6D9G8   A0A1B6IR81   W5JS13   A0A182S5Q4   E0W101   A0A1B6BX49   A0A2P8YD78   A0A3B0JMR2   B4KUS6   A0A182WD57   B4LCR2   A0A0A1WDE8   A0A1W4VVF4   Q2LZ78   A0A182YC70   A0A0K8V898   A0A034VMC9   B4IZB9   W8BN15   B3M4B1   B3NGZ4   A0A182K2M6   B4HEX5   B4QQA0   Q9VTM4   B4PFN0   A0A1Q3G2E0   A0A182R1Z3   U5EV06   A0A0M4ERG7   A0A182FC20   A0A182P1H9   A0A336M916   X1WIE4   A0A2H8TT21   A0A2S2NFS4   A0A1A9WH58   A0A182U5D1   A0A1W7R8L4   A0A182MXF7   N6UDI7   U4UCC3   B4N4L8   K7J9J5   A0A151WV45   A0A0J7P293   E2ALK3   A0A154PP97   A0A0L7RAL5   T1I227   A0A3L8D3M1   A0A088AP91   A0A2A3EQV6   A0A151HZK4   A0A195EUW0   A0A195CS72   A0A195E369   T1IW22   A0A1W4VVA5  

KEGG

101746293    K10305 F-box protein 25/32 | (RefSeq) F-box only protein 32

PATHWAY

04068    FoxO signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0003723   GO:0016787   GO:0016567   GO:0019005   GO:0031146   GO:0016021   GO:0005515   GO:0006364   GO:0000154   GO:0008649   GO:0022891   GO:0043565   GO:0016020   GO:0005634   GO:0006260  

PANTHER

PTHR13123  

Length:

361

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01343

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01152

outside

1  -  361

 

 

Pi

21.758059

Theta

20.919014

Tajima's D

0.183917

CLR

1.602432

CSRT

0.428878556072196

Interpretation

Uncertain