Gene

KWMTBOMO06886

Annotation

PREDICTED:_tRNA_dimethylallyltransferase?_mitochondrial-like_[Bombyx_mori]

Location

Bomo_Chr11(+):18702111-18712987      View in EpiBrowser

Full name

tRNA dimethylallyltransferase      

Location in the cell

Nuclear   Reliability : 3.69

CDS

ATGAGAATATACAAAGGATTGGATATCGTGACGGCAAAAGCGAGTCCTCAAGAACGGGAGATGGCTCCTCATCATCTCTTGGACATACTGGAGCCTCACCAGTTTTTCACGGTAGTAGACTTCCGGAACAGAGCCTTAAAAATTATTGACAGCTTAATCGACCAGAAGAAAATCCCAATAATAGTTGGAGGCACGATCTACTACATTGAATCCATCGTCTATCAAATCCTTGTTGAGAGTATGGACGACACAGATGCACTGCTGTGGGATAAAAGTCGTAGGAAGAGAGATATAGATAATACACCTAATACAGCTGAAAAAATATCTAAGAAAACAAACGATGGCTGTGGTGGCGATAATAAAATGAAAGTGAAAGGAGAACAACCAAAAGAAGATGAAGAATTTATAAGAATAACGCTATCAACTGACAAAGAAGTTAAAATTCTAGATGCTGAAGAGGAAACTTTGAAGAGACAGCTTCAGGAAGATGTGGATAACGAAGCTCGGTTCACAAACAACGAAATAAGTGAAAAACTGAGGCTCATAGATCCTGCGATGGCCAATAGACTGCACCCAAATAATCGGAGGAAGATTTTGAGACGGTTGACAACCCAGCGCAGAGTTTCCTTCCTGTTGCTCTCTATGTCCTTGTTCAAAGCCCTTAATGGACAATGGCTTAACTGTTCCGCTAAATTTGCCTACACGTATGTGCCATAG

Protein

MRIYKGLDIVTAKASPQEREMAPHHLLDILEPHQFFTVVDFRNRALKIIDSLIDQKKIPIIVGGTIYYIESIVYQILVESMDDTDALLWDKSRRKRDIDNTPNTAEKISKKTNDGCGGDNKMKVKGEQPKEDEEFIRITLSTDKEVKILDAEEETLKRQLQEDVDNEARFTNNEISEKLRLIDPAMANRLHPNNRRKILRRLTTQRRVSFLLLSMSLFKALNGQWLNCSAKFAYTYVP

Description

Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37.

Catalytic Activity

adenosine(37) in tRNA + dimethylallyl diphosphate = diphosphate + N(6)-dimethylallyladenosine(37) in tRNA

Similarity

Belongs to the IPP transferase family.

Uniprot

A0A2A4J3C6   A0A3S2NSA8   A0A2H1WWF3   A0A212F811   A0A0L7KQP6   A0A194Q9F8   + More
A0A0T6BDW9   A0A195CY49   A0A0C9PRS7   A0A154PPN5   A0A2M4AV45   A0A1Q3FUH6   A0A2M4CJ52   A0A195EZX8   A0A3L8DGV1   A0A026WG53   A0A182QG44   A0A084WCC0   A0A195BPT2   A0A1B6E6L8   E9IPP0   A0A2M4CWQ4   A0A2M4CVF8   A0A1I8MWI1   A0A182YCQ8   A0A151IXH3   A0A158P2W8   A0A087U2N0   A0A3R7QAR6   A0A0A9Z0W4   A0A0A1WT13   A0A1W4XCH3   A0A146MCA4   A0A1W0WNW5   A0A2M3ZB89   A0A0P5QUP6   A0A0P6DLH8   U5EYY2   A0A0K8WLA1   A0A0P5GZF7   A0A0P5N075   A0A0K8U6X3   A0A0P5PEV4   T1JQQ5   A0A0P6DTW0   A0A0P5P8C4   A0A1Z5L5F8   A0A2A3EI31   A0A2R5L5Q2   A0A2B4SD72   A0A2L2Y6H3   A0A3M6V5Z6   A0A1E1X3E8   A0A1J1IEJ0   A0A034VZ81   L7MD52   A0A0P6JUW6   A0A088APF7   A0A0P6CN92   A0A0P5LSU2   A0A0P5LVP8   A0A131X7J7   K1RAY2   A0A0N8BY15   A0A147BS31   Q7QEH9   A0A0P5XRC7   A0A0P5BU79   G3MKF2   A0A3F2YSM4   A0A0P5BU43   A0A2C9H897   A0A0N7ZPM6   W8CD56   A0A0P4ZJT9   A0A151XH91   A0A131Y1F2   A0A1I8NV79   A0A0P5DPA8   A0A0P4YB18   A0A0N8CL25   A0A0P5XHL7   A0A0N8CP18   A0A0P5VM27   A0A0P4Y891   A0A0P5TXH2   A0A0P5ZCH1   A0A0P5A017   A0A0N8CQ00   A0A182LSG4  

EC Number

2.5.1.75

Pubmed

22118469    26227816    26354079    30249741    24508170    24438588    + More
21282665    25315136    25244985    21347285    25401762    25830018    26823975    28528879    26561354    30382153    28503490    25348373    25576852    28049606    22992520    29652888    12364791    14747013    17210077    22216098    24495485   

EMBL

NWSH01003356    PCG66491.1    RSAL01000107    RVE47279.1    ODYU01011519    SOQ57296.1    + More
AGBW02009812    OWR49870.1    JTDY01007197    KOB65386.1    KQ459252    KPJ02138.1    LJIG01001399    KRT85541.1    KQ977185    KYN05074.1    GBYB01004068    JAG73835.1    KQ435012    KZC13843.1    GGFK01011342    MBW44663.1    GFDL01003791    JAV31254.1    GGFL01001198    MBW65376.1    KQ981905    KYN33429.1    QOIP01000009    RLU19149.1    KK107231    EZA55037.1    AXCN02000898    ATLV01022651    KE525335    KFB47864.1    KQ976432    KYM87502.1    GEDC01003753    JAS33545.1    GL764554    EFZ17482.1    GGFL01005110    MBW69288.1    GGFL01005149    MBW69327.1    KQ980801    KYN12801.1    ADTU01007582    ADTU01007583    ADTU01007584    ADTU01007585    ADTU01007586    ADTU01007587    ADTU01007588    ADTU01007589    ADTU01007590    ADTU01007591    KK117869    KFM71619.1    QCYY01002067    ROT73086.1    GBHO01004687    JAG38917.1    GBXI01012083    JAD02209.1    GDHC01001764    JAQ16865.1    MTYJ01000069    OQV16905.1    GGFM01005065    MBW25816.1    GDIQ01129634    JAL22092.1    GDIQ01076590    JAN18147.1    GANO01001742    JAB58129.1    GDHF01000457    JAI51857.1    GDIQ01235546    JAK16179.1    GDIQ01151064    JAL00662.1    GDHF01029986    JAI22328.1    GDIQ01151065    JAL00661.1    CAEY01000440    GDIQ01076589    JAN18148.1    GDIQ01132244    JAL19482.1    GFJQ02004317    JAW02653.1    KZ288237    PBC31377.1    GGLE01000692    MBY04818.1    LSMT01000127    PFX26385.1    IAAA01014710    LAA03738.1    RCHS01000021    RMX61393.1    GFAC01005403    JAT93785.1    CVRI01000044    CRK96849.1    GAKP01011253    JAC47699.1    GACK01003119    JAA61915.1    GDIQ01007865    JAN86872.1    GDIQ01088883    JAN05854.1    GDIQ01165764    JAK85961.1    GDIQ01167412    JAK84313.1    GEFH01005037    JAP63544.1    JH817310    EKC31211.1    GDIQ01133739    JAL17987.1    GEGO01001867    JAR93537.1    AAAB01008847    EAA06879.5    GDIP01068491    JAM35224.1    GDIP01179892    JAJ43510.1    JO842353    AEO33970.1    APCN01001081    GDIP01179893    LRGB01000494    JAJ43509.1    KZS18957.1    GDIP01224929    JAI98472.1    GAMC01002531    JAC04025.1    GDIP01224928    JAI98473.1    KQ982130    KYQ59727.1    GEFM01002707    JAP73089.1    GDIP01156840    JAJ66562.1    GDIP01231138    JAI92263.1    GDIP01121247    JAL82467.1    GDIP01071960    JAM31755.1    GDIP01112903    JAL90811.1    GDIP01098156    JAM05559.1    GDIP01231139    JAI92262.1    GDIP01121248    JAL82466.1    GDIP01046158    JAM57557.1    GDIP01206028    JAJ17374.1    GDIP01110247    JAL93467.1    AXCM01008753   

Proteomes

UP000218220    UP000283053    UP000007151    UP000037510    UP000053268    UP000078542    + More
UP000076502    UP000078541    UP000279307    UP000053097    UP000075886    UP000030765    UP000078540    UP000095301    UP000076408    UP000078492    UP000005205    UP000054359    UP000283509    UP000192223    UP000015104    UP000242457    UP000225706    UP000275408    UP000183832    UP000005203    UP000005408    UP000007062    UP000075840    UP000076858    UP000076407    UP000075809    UP000095300    UP000075883   

Pfam

PF01715   IPPT        + More
PF12171   zf-C2H2_jaz
PF13843   DDE_Tnp_1_7
PF14913   DPCD

Interpro

IPR027417   P-loop_NTPase        + More
IPR018022   IPT       
IPR039657   Dimethylallyltransferase       
IPR036236   Znf_C2H2_sf       
IPR022755   Znf_C2H2_jaz       
IPR013087   Znf_C2H2_type       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR030666   IPP_transferase_euk       
IPR029526   PGBD       
IPR026224   DPCD       

SUPFAM

SSF52540   SSF52540        + More
SSF57667   SSF57667       

ProteinModelPortal

A0A2A4J3C6   A0A3S2NSA8   A0A2H1WWF3   A0A212F811   A0A0L7KQP6   A0A194Q9F8   + More
A0A0T6BDW9   A0A195CY49   A0A0C9PRS7   A0A154PPN5   A0A2M4AV45   A0A1Q3FUH6   A0A2M4CJ52   A0A195EZX8   A0A3L8DGV1   A0A026WG53   A0A182QG44   A0A084WCC0   A0A195BPT2   A0A1B6E6L8   E9IPP0   A0A2M4CWQ4   A0A2M4CVF8   A0A1I8MWI1   A0A182YCQ8   A0A151IXH3   A0A158P2W8   A0A087U2N0   A0A3R7QAR6   A0A0A9Z0W4   A0A0A1WT13   A0A1W4XCH3   A0A146MCA4   A0A1W0WNW5   A0A2M3ZB89   A0A0P5QUP6   A0A0P6DLH8   U5EYY2   A0A0K8WLA1   A0A0P5GZF7   A0A0P5N075   A0A0K8U6X3   A0A0P5PEV4   T1JQQ5   A0A0P6DTW0   A0A0P5P8C4   A0A1Z5L5F8   A0A2A3EI31   A0A2R5L5Q2   A0A2B4SD72   A0A2L2Y6H3   A0A3M6V5Z6   A0A1E1X3E8   A0A1J1IEJ0   A0A034VZ81   L7MD52   A0A0P6JUW6   A0A088APF7   A0A0P6CN92   A0A0P5LSU2   A0A0P5LVP8   A0A131X7J7   K1RAY2   A0A0N8BY15   A0A147BS31   Q7QEH9   A0A0P5XRC7   A0A0P5BU79   G3MKF2   A0A3F2YSM4   A0A0P5BU43   A0A2C9H897   A0A0N7ZPM6   W8CD56   A0A0P4ZJT9   A0A151XH91   A0A131Y1F2   A0A1I8NV79   A0A0P5DPA8   A0A0P4YB18   A0A0N8CL25   A0A0P5XHL7   A0A0N8CP18   A0A0P5VM27   A0A0P4Y891   A0A0P5TXH2   A0A0P5ZCH1   A0A0P5A017   A0A0N8CQ00   A0A182LSG4  

PDB

3D3Q     E-value=1.39183e-12,     Score=174

KEGG

101746986    K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] | (RefSeq) tRNA dimethylallyltransferase, mitocho

PATHWAY

01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008033   GO:0016740   GO:0005524   GO:0008270   GO:0003676   GO:0046872   GO:0052381   GO:0005737   GO:0005739   GO:0006400   GO:0003700   GO:0005634   GO:0006355   GO:0022891   GO:0043565   GO:0016567   GO:0016020   GO:0006260  

PANTHER

PTHR11088  

Length:

238

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.18577

Exp number, first 60 AAs:

0.16005

Total prob of N-in:

0.23704

outside

1  -  238

 

 

Pi

21.185237

Theta

19.644604

Tajima's D

0.211542

CLR

0.732532

CSRT

0.441577921103945

Interpretation

Uncertain