Gene

KWMTBOMO06878

Pre Gene Modal

BGIBMGA012078

Annotation

PREDICTED:_sorting_nexin-14-like_[Bombyx_mori]

Location

Bomo_Chr11(-):18212037-18219742      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.98

CDS

ATGTGTTGGGATGTAGAAACACCGGAAGTAGTAGAGATCGAAGAAGGCAAGGGTTGTGTTACATGTGGATCAAAGAAATGTAACAGACATGATGACAGCATTACTACTGAGCCCTGGGTCGGGCTGCAGATACATAAACAGCTTGATCAAGCCATTGAAGATTTTTACAACACAATATTGGACCAATTCGTCAATTCATGGTATAGCAAGATCACACTGCAGCCATTCTTCGTGGATGAACTAAAGTATCAATTAAGATATGCTTCCGCCTGCCTCTTACAACGAGCTATTAAGGTAAACTATTCTCGGTTTATAACGGAGCGTCTCCTGCCGTGCGCGTTGCGTCATTACACGCTGTGCTCGGACCGGCCGGCCGCGGCGCCGTTGCCCTCGAAGCTGGCCCTCCACCCCGCGGCTGCGAACAGAAACGCGGAGCTCAAGTATCTGAGGTGCATCACGAACGCGATCATGCCGTACCTACTTAAGAACGATGATATACAAAATTCCGTGTTTCGTGTACTCGTCAGAGAAATATTCGCCGGTTGGGTGTTATTGTCATTGACCGACGTGCTCGCTGATCCGTATATACTAAACACTTTGATAATATTGGCCACTGGCAATGAAAGGATGGCACAGTTACCAGCCTCGCCTAATTATAAGGTAGAATTCCTAGAGACCTTCGTGAGGCAGACCGAGTCGTTGTACGCGCAGCGCTGTAAACTGTTAAAGATAGACTTGGACTTCGTCATAAACGATCAGGAATATTTCTATGCTTTCATGCAGTACATGAAGAACACGAGTCACATACATCTGCTGCAGTTCTACAAGGACATCAATACTAAATAG

Protein

MCWDVETPEVVEIEEGKGCVTCGSKKCNRHDDSITTEPWVGLQIHKQLDQAIEDFYNTILDQFVNSWYSKITLQPFFVDELKYQLRYASACLLQRAIKVNYSRFITERLLPCALRHYTLCSDRPAAAPLPSKLALHPAAANRNAELKYLRCITNAIMPYLLKNDDIQNSVFRVLVREIFAGWVLLSLTDVLADPYILNTLIILATGNERMAQLPASPNYKVEFLETFVRQTESLYAQRCKLLKIDLDFVINDQEYFYAFMQYMKNTSHIHLLQFYKDINTK

Uniprot

A0A2H1V4G1   A0A1E1W5V1   A0A2A4K067   A0A2A4K195   A0A2A4K0A2   H9JRB8   + More
A0A3S2PKW8   A0A194QPN9   A0A194Q9F6   A0A2Z5U794   A0A212EYM0   A0A2P8XKS6   A0A2J7QAI0   A0A2J7QAI1   A0A1Y1LTS8   A0A0T6B2T7   A0A0V0G5S2   D6WEY6   A0A224XJT2   A0A069DX22   A0A1B0EZ09   A0A1L8DUI3   A0A1B6FL48   A0A1B6JRI3   A0A1B6HIN5   A0A146LYB7   A0A1B6FTB1   T1HCS5   A0A146M6G8   A0A2R7VUC8   S4RNM5   A0A336MLP9   U5EQB5   A0A336MFD8   A0A2C9M448   B0X352   A0A1Q3G311   Q173P1   V3ZP10   A0A182FBA5   A0A084WIC8   A0A182Y1J8   A0A182HQA9   A0A1A8LZW8   T1IH03   V9KJD2   W5JAA9   A0A182JDQ5   A0A182MMA2   A0A1A8PJG8   N6U5X2   A0A182WF02   C3Z7E0   A0A182SI06   A0A2I4BQV1   A0A2I4BQZ1   A0A2I4BQU2   A0A2I4BQT7   Q6IR78   A0A3F2Z239   V9KCI3   Q7Q0B8   A0A1A8NR93   A0A1A8PWN2   A0A182VP82   A0A3B3TEI7   A0A1A8MLA2   A0A1A8QX88   A0A3B3TDZ8   A0A3B3TEE8   A0A182KSD8   A0A1I8JUZ5   A0A182RFF3   A0A1L8G9S5   Q4V829   A0A182PJF0   A0A1A8F0H1   A0A1S3HE54   A0A1A8F0H8   A0A1S3HBE9   A0A3B3HC49   A0A1A8H4A6   A0A3B3I3K0   A0A1A8FGT4   A0A3P9J855   A0A3B3HCM1   H2MJ47   A0A3P9KSJ7   A0A3P9HQK8   A0A3P9M6Q7   A0A3P9HQU7   A0A3P9KS84   A0A3B3HIX3   A0A3P9J864   A0A3P9HR80   A0A3P9J7X0   U6DL66  

Pubmed

19121390    26354079    22118469    29403074    28004739    18362917    + More
19820115    26334808    26823975    15562597    17510324    23254933    24438588    25244985    24402279    20920257    23761445    23537049    18563158    12364791    29240929    20966253    27762356    17554307   

EMBL

ODYU01000597    SOQ35666.1    GDQN01008697    JAT82357.1    NWSH01000295    PCG77665.1    + More
PCG77664.1    PCG77667.1    BABH01016071    BABH01016072    BABH01016073    BABH01016074    BABH01016075    RSAL01000006    RVE54338.1    KQ461185    KPJ07472.1    KQ459252    KPJ02147.1    AP017502    BBB06798.1    AGBW02011469    OWR46596.1    PYGN01001832    PSN32610.1    NEVH01016330    PNF25600.1    PNF25598.1    GEZM01048768    JAV76421.1    LJIG01016139    KRT81499.1    GECL01002805    JAP03319.1    KQ971319    EFA00314.2    GFTR01008157    JAW08269.1    GBGD01000449    JAC88440.1    AJWK01020278    AJWK01020279    GFDF01004008    JAV10076.1    GECZ01018869    JAS50900.1    GECU01006193    JAT01514.1    GECU01033197    JAS74509.1    GDHC01006993    JAQ11636.1    GECZ01016390    JAS53379.1    ACPB03004962    GDHC01004007    JAQ14622.1    KK854090    PTY11096.1    UFQS01001620    UFQT01001620    SSX11631.1    SSX31196.1    GANO01004366    JAB55505.1    UFQT01001096    SSX28896.1    DS232308    EDS39554.1    GFDL01000837    JAV34208.1    CH477418    EAT41296.1    KB203566    ESO84230.1    ATLV01023929    KE525347    KFB49972.1    APCN01003304    HAEF01010317    SBR50152.1    JH429682    JW866007    AFO98524.1    ADMH02002043    ETN59795.1    AXCM01001727    HAEH01007155    SBR81172.1    APGK01041353    KB740993    ENN76036.1    GG666590    EEN51736.1    BC071022    AAH71022.1    JW863092    AFO95609.1    AAAB01008986    EAA00517.3    HAEH01003555    SBR71568.1    HAEI01003707    SBR85666.1    HAEF01016368    SBR57527.1    HAEH01013613    SBR97843.1    CM004474    OCT80491.1    BC097578    AAH97578.1    HAEB01005749    SBQ52276.1    HAEB01005082    SBQ51609.1    HAEC01009853    SBQ78069.1    HAEB01012098    HAEC01002455    SBQ58625.1    HAAF01010804    CCP82628.1   

Proteomes

UP000218220    UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000245037    UP000235965    UP000007266    UP000092461    UP000015103    UP000245300    UP000076420    UP000002320    UP000008820    UP000030746    UP000069272    UP000030765    UP000076408    UP000075840    UP000000673    UP000075880    UP000075883    UP000019118    UP000075920    UP000001554    UP000075901    UP000192220    UP000076407    UP000007062    UP000075903    UP000261540    UP000075882    UP000075902    UP000075900    UP000186698    UP000075885    UP000085678    UP000001038    UP000265200    UP000265180   

PRIDE

H9JRB8   

Pfam

PF00615   RGS        + More
PF00787   PX
PF02194   PXA
PF08628   Nexin_C
PF00160   Pro_isomerase

Interpro

IPR003114   Phox_assoc        + More
IPR016137   RGS       
IPR036305   RGS_sf       
IPR001683   Phox       
IPR036871   PX_dom_sf       
IPR037436   SNX14_PX       
IPR013937   Sorting_nexin_C       
IPR037892   SNX14_RGS       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR029000   Cyclophilin-like_dom_sf       

SUPFAM

SSF64268   SSF64268        + More
SSF48097   SSF48097       
SSF50891   SSF50891       

Gene 3D

3.30.1520.10     2.40.100.10    

CDD

cd06877  PX_SNX14
cd08722  RGS_SNX14

ProteinModelPortal

A0A2H1V4G1   A0A1E1W5V1   A0A2A4K067   A0A2A4K195   A0A2A4K0A2   H9JRB8   + More
A0A3S2PKW8   A0A194QPN9   A0A194Q9F6   A0A2Z5U794   A0A212EYM0   A0A2P8XKS6   A0A2J7QAI0   A0A2J7QAI1   A0A1Y1LTS8   A0A0T6B2T7   A0A0V0G5S2   D6WEY6   A0A224XJT2   A0A069DX22   A0A1B0EZ09   A0A1L8DUI3   A0A1B6FL48   A0A1B6JRI3   A0A1B6HIN5   A0A146LYB7   A0A1B6FTB1   T1HCS5   A0A146M6G8   A0A2R7VUC8   S4RNM5   A0A336MLP9   U5EQB5   A0A336MFD8   A0A2C9M448   B0X352   A0A1Q3G311   Q173P1   V3ZP10   A0A182FBA5   A0A084WIC8   A0A182Y1J8   A0A182HQA9   A0A1A8LZW8   T1IH03   V9KJD2   W5JAA9   A0A182JDQ5   A0A182MMA2   A0A1A8PJG8   N6U5X2   A0A182WF02   C3Z7E0   A0A182SI06   A0A2I4BQV1   A0A2I4BQZ1   A0A2I4BQU2   A0A2I4BQT7   Q6IR78   A0A3F2Z239   V9KCI3   Q7Q0B8   A0A1A8NR93   A0A1A8PWN2   A0A182VP82   A0A3B3TEI7   A0A1A8MLA2   A0A1A8QX88   A0A3B3TDZ8   A0A3B3TEE8   A0A182KSD8   A0A1I8JUZ5   A0A182RFF3   A0A1L8G9S5   Q4V829   A0A182PJF0   A0A1A8F0H1   A0A1S3HE54   A0A1A8F0H8   A0A1S3HBE9   A0A3B3HC49   A0A1A8H4A6   A0A3B3I3K0   A0A1A8FGT4   A0A3P9J855   A0A3B3HCM1   H2MJ47   A0A3P9KSJ7   A0A3P9HQK8   A0A3P9M6Q7   A0A3P9HQU7   A0A3P9KS84   A0A3B3HIX3   A0A3P9J864   A0A3P9HR80   A0A3P9J7X0   U6DL66  

KEGG

105842520    K17926 sorting nexin-14 | (RefSeq) sorting nexin-14-like

GO

GO:0016021   GO:0035091   GO:0080025   GO:0097352   GO:0021680   GO:0003755   GO:0006457  

Length:

281

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.13266

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.05952

outside

1  -  281

 

 

Pi

4.353361

Theta

17.742685

Tajima's D

-0.910675

CLR

0.520896

CSRT

0.151392430378481

Interpretation

Uncertain