Gene

KWMTBOMO06876

Pre Gene Modal

BGIBMGA012078

Annotation

PREDICTED:_sorting_nexin-14-like_[Bombyx_mori]

Location

Bomo_Chr11(-):18199771-18208342      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.44 Mitochondrial   Reliability : 1.291 Nuclear   Reliability : 1.643

CDS

ATGAAGATCTTAAATCCGGATTTGTCTGAAAGCGAGAAGGCTTCATTGCACGGCGAGGCCTGCGACATCTACTCCGTGTACCTGTCGCAACGCTCCGCCCACAGAGTGCCGCTGCACCCCGCGCTGGCCACGGAGCTGTTCGAGCTGCTGCAGAGCCGGGACAGCATCAGGAGACTGCAAACAAGCCGCGCCCTGTACCAAGCGGCCAGACAATCGCACGCCGTACTCGAAAAGATAATGTTGCCGAGATTCCTGCACAGCGAACAGTTTTATAAATTGTTATTAGGAAGCCGAATACCCACCGGATATCAGAAGCACATATTCAAGAAGCCCCAGGAGAAGCTTCTGAACACCGCCATAAGGCTGGGCGGCAGACTGCGCGGCGCCCTCAGGGCACCCGCCGCCGACGGGCAGCTGCCGGACGGCTACCCCGACTCGGATGAGCTGGAGGCCAACGGCGACGACAACATCGACATCCTCAAGTATCTGGAGAGCATCACGGCCGAGGAGTCTCTGCGGGGGAACGACCTGACCAAGTACAAGGTCGTGCTCACCAATGTCGAGATCGTGCAGGCGCCCCCGCGGCGCGGCGGCGTGCGCGCGTTCACGCTGGGCGTGCAGCGGCTGGAGGGCGCGCTGTGCTACCGCGTGCTGCGCCGCACGGAGCACGACTTCCACCTGCTGCGGAGCAAGCTGCACGAGTTCCACGGGGACGCGCTGCTGCACGACCTGCCGCTGCCCTCCAGGAGAGACAACAGTCCATTGGAGACTATACGGTACAAGTACGAAGATTTCCTTCAGCGTCTGCTGCAGAAGAGTCTGTTGCAGACGAGCGAGCTGCTCAGGCTGTTCCTCACGGAGGAGGGAGACTTTTCCCTGGCGGTCCAGGCGTCGACCCTCAACGCAAGCAGCACAGACCTGCTGAACATCTATCAGTCCGTCACCCACAAGCTGAGGAAGGAGAAGGGGCAGCACCTGGAGAGCTTCCTGAGGAATCTGCTCGTGTCTTCAGACAGGGACCGGTACCGGGCACTCAAACAAGGTCGAGAGGTGGAGGAGGCGGTGGAGGTCAGCGAAGAGGTGGAGGCGGAGCAGCGGAGCGCCGGGCCGCGGCGCCCGCGCGACCTCACGGCCTCCGTGTTTGGGAACAACTTCGACGTGGAGTCCGGCCCCGTTACGTCAGCGCCCGCCCACCGGACCCCCGTCGCCGGCCTCACTCAGTGCCTCATGTATCTGTTGTGCGGGGCGGGGGGCGCGCGCGGGGTGGCGGCGGGCGCGCTGGGGGCGGCGCTGGGCTGCGTGCGCGCGCCGCTGGACGCCGCCGCCGACGCGCACCTCGCCGCCGCGCTGCGCCGCACGCTCACCCAGCCGCGCCTGGCGCATCTCATCGCGCTGGGACAAGAATTATTATTCGGTAAGAGATCTTCAACTCCACGTGTAGACTCGAACGAGCATCGTGATCTGGCTCGGCGACAGTTGCTGGGCGTTACGCGGGGCGCCGCGATGCTGGTCCCAGGACTAAAGGACGCGCTCAACAACGCCTTCGAGATTATACAGGACCCGAGGCTGAATAAACAGTTGGTGTATAATTTATTGGACCTGTGTTTAGTGGAGCTGTTTCCGGAATTGAAAAACGAACATGAATGTTCCGACAGCGGACCAAAGAGCTGA

Protein

MKILNPDLSESEKASLHGEACDIYSVYLSQRSAHRVPLHPALATELFELLQSRDSIRRLQTSRALYQAARQSHAVLEKIMLPRFLHSEQFYKLLLGSRIPTGYQKHIFKKPQEKLLNTAIRLGGRLRGALRAPAADGQLPDGYPDSDELEANGDDNIDILKYLESITAEESLRGNDLTKYKVVLTNVEIVQAPPRRGGVRAFTLGVQRLEGALCYRVLRRTEHDFHLLRSKLHEFHGDALLHDLPLPSRRDNSPLETIRYKYEDFLQRLLQKSLLQTSELLRLFLTEEGDFSLAVQASTLNASSTDLLNIYQSVTHKLRKEKGQHLESFLRNLLVSSDRDRYRALKQGREVEEAVEVSEEVEAEQRSAGPRRPRDLTASVFGNNFDVESGPVTSAPAHRTPVAGLTQCLMYLLCGAGGARGVAAGALGAALGCVRAPLDAAADAHLAAALRRTLTQPRLAHLIALGQELLFGKRSSTPRVDSNEHRDLARRQLLGVTRGAAMLVPGLKDALNNAFEIIQDPRLNKQLVYNLLDLCLVELFPELKNEHECSDSGPKS

Uniprot

H9JRB8   A0A2H1V4G1   A0A3S2PKW8   A0A2A4K067   A0A1E1W5V1   A0A2A4K195   + More
A0A194Q9F6   A0A2A4K0A2   A0A212EYM0   D6WEY6   A0A1Y1LTS8   A0A2J7QAL2   A0A2J7QAI0   A0A067R2I0   A0A2J7QAI1   E2B9W5   E2AGL5   A0A195CLP3   A0A151J8S2   A0A088AJL1   A0A158P1S7   A0A0L7RE78   A0A151XAX9   F4W6N9   A0A1W4WR76   A0A0M8ZMN9   A0A2P8XKS6   A0A1B6EFM1   A0A1B6CSG8   T1HCS5   A0A1B6FTB1   A0A224XJT2   R7TFG3   A0A069DX22   A0A0V0G5S2   C3Z7E0   A0A1B6HIN5   A0A1B6KT93   A0A1B6JRI3   A0A0K8T7K7   A0A3Q0IRY1   A0A1B6M0E3  

Pubmed

19121390    26354079    22118469    18362917    19820115    28004739    + More
24845553    20798317    21347285    21719571    29403074    23254933    26334808    18563158   

EMBL

BABH01016071    BABH01016072    BABH01016073    BABH01016074    BABH01016075    ODYU01000597    + More
SOQ35666.1    RSAL01000006    RVE54338.1    NWSH01000295    PCG77665.1    GDQN01008697    JAT82357.1    PCG77664.1    KQ459252    KPJ02147.1    PCG77667.1    AGBW02011469    OWR46596.1    KQ971319    EFA00314.2    GEZM01048768    JAV76421.1    NEVH01016330    PNF25599.1    PNF25600.1    KK852804    KDR16207.1    PNF25598.1    GL446605    EFN87552.1    GL439322    EFN67435.1    KQ977595    KYN01623.1    KQ979492    KYN21219.1    ADTU01006781    KQ414612    KOC69153.1    KQ982335    KYQ57448.1    GL887707    EGI70115.1    KQ436240    KOX67345.1    PYGN01001832    PSN32610.1    GEDC01000570    JAS36728.1    GEDC01020924    JAS16374.1    ACPB03004962    GECZ01016390    JAS53379.1    GFTR01008157    JAW08269.1    AMQN01013424    KB310211    ELT92237.1    GBGD01000449    JAC88440.1    GECL01002805    JAP03319.1    GG666590    EEN51736.1    GECU01033197    JAS74509.1    GEBQ01025304    JAT14673.1    GECU01006193    JAT01514.1    GBRD01004317    JAG61504.1    GEBQ01010612    JAT29365.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000007266    + More
UP000235965    UP000027135    UP000008237    UP000000311    UP000078542    UP000078492    UP000005203    UP000005205    UP000053825    UP000075809    UP000007755    UP000192223    UP000053105    UP000245037    UP000015103    UP000014760    UP000001554    UP000079169   

PRIDE

H9JRB8   

Pfam

PF00787   PX        + More
PF02194   PXA
PF00615   RGS
PF08628   Nexin_C

Interpro

IPR036871   PX_dom_sf        + More
IPR036305   RGS_sf       
IPR001683   Phox       
IPR003114   Phox_assoc       
IPR016137   RGS       
IPR037436   SNX14_PX       
IPR013937   Sorting_nexin_C       
IPR037892   SNX14_RGS       

SUPFAM

SSF48097   SSF48097        + More
SSF64268   SSF64268       

Gene 3D

3.30.1520.10    

CDD

cd06877  PX_SNX14
cd08722  RGS_SNX14

ProteinModelPortal

H9JRB8   A0A2H1V4G1   A0A3S2PKW8   A0A2A4K067   A0A1E1W5V1   A0A2A4K195   + More
A0A194Q9F6   A0A2A4K0A2   A0A212EYM0   D6WEY6   A0A1Y1LTS8   A0A2J7QAL2   A0A2J7QAI0   A0A067R2I0   A0A2J7QAI1   E2B9W5   E2AGL5   A0A195CLP3   A0A151J8S2   A0A088AJL1   A0A158P1S7   A0A0L7RE78   A0A151XAX9   F4W6N9   A0A1W4WR76   A0A0M8ZMN9   A0A2P8XKS6   A0A1B6EFM1   A0A1B6CSG8   T1HCS5   A0A1B6FTB1   A0A224XJT2   R7TFG3   A0A069DX22   A0A0V0G5S2   C3Z7E0   A0A1B6HIN5   A0A1B6KT93   A0A1B6JRI3   A0A0K8T7K7   A0A3Q0IRY1   A0A1B6M0E3  

PDB

4BGJ     E-value=0.000153506,     Score=109

KEGG

105842520    K17926 sorting nexin-14 | (RefSeq) sorting nexin-14-like

GO

GO:0035091   GO:0016021   GO:0080025   GO:0022857   GO:0005215   GO:0016020   GO:0022891   GO:0043565   GO:0016567   GO:0005634   GO:0006260  

Length:

556

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14512

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00078

outside

1  -  556

 

 

Pi

14.960505

Theta

16.11322

Tajima's D

-1.83591

CLR

0.63371

CSRT

0.0223488825558722

Interpretation

Uncertain