Gene

KWMTBOMO06874

Pre Gene Modal

BGIBMGA012074

Annotation

PREDICTED:_retinol_dehydrogenase_11-like_[Amyelois_transitella]

Location

Bomo_Chr11(+):18193293-18194797      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.826

CDS

ATGTCTGTTATTATAGCATCTGCTGTTTTGAGCGCTGCCGCTTTTTATTGGTATGTAAACCGTGATAAACCAATCAAGCATATACTGAAAGAGATTCGGTACGCGTTGGACATGCAGGGCGCTGGGGCGGGTGGCCTTATTGACGACTGGATTAACGTGTCGAGGAACAGAATTGCGTTACCAGATGCGGCCGGAAAAGTTGCGGTCGTTACCGGCGGAGCGAGGGGCATCGGCACAGAAGTCATCAAGGGCTTACTCAAAGCAAACATGCGGGTGATAATCGGAATACGAAACCCGGAATTGGTGCATAAATTATCTGAATCAATGGAGAATGGTCAAAACTTGGAAGCTTACAAACTGGATTTGAAATCGTTAAAATCCGTCAAGGAATTTGCTGATAATGTACTGCATAAGTACCCAAAGATAAATTTACTAGTTAACAATGCTGGGATAATGTATGGGAAGTATGAATTGACTACAGACGGTTTTGAATCACAACTCGCTGTGAATCACCTGGGGCATTTTTATTTGACACACCTACTTTTGCCGGCTTTGAAGAAAGCTGGAAACTTATGTGAACCATCAAGGTTCATTAATGTGACGTCATGTGGCCACTATCCGGGACAAATATATTTTGATGATATTAACATGAAAGAGCATTATGATGAAACTGCAGCTTATGCACAATCCAAATTAGCTCAGTTAATGATGGCAAGATACATTAATAAGATTATGGAAGAGAATAATATTCCTGTCAAAGGATACTCAGTGCATCCCGGGATTGTCAACACTGATTTATTCGATGGTACAGTCTTCAAAAGAGTTTTTCCATGGGCTATGAAATTATTCTTCAAGACTCCAGAAAAGGGAGCCGTTTCTATACTCTTTGCGTGTTTCAATGAAGAATTGCAGAAGCGGGGAGGATTATACATTAGTAATTGTATTGAAGGGATCAGTAATAGATTTTCAAAGAATTTGGAATATCAAAAAATACTTTTTGAGCTATCCTGTCAATTAGTTGGAATTGATGCCGAGAACTTTGGAAATACTGAATAA

Protein

MSVIIASAVLSAAAFYWYVNRDKPIKHILKEIRYALDMQGAGAGGLIDDWINVSRNRIALPDAAGKVAVVTGGARGIGTEVIKGLLKANMRVIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLPALKKAGNLCEPSRFINVTSCGHYPGQIYFDDINMKEHYDETAAYAQSKLAQLMMARYINKIMEENNIPVKGYSVHPGIVNTDLFDGTVFKRVFPWAMKLFFKTPEKGAVSILFACFNEELQKRGGLYISNCIEGISNRFSKNLEYQKILFELSCQLVGIDAENFGNTE

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JRB4   A0A2A4K1X6   A0A0L7KMP1   A0A2H1V5W5   A0A3S2LUZ1   A0A2Z5U787   + More
A0A1Q3G5H5   A0A194QR71   A0A194Q9R5   I4DJM0   A0A212ELP5   A0A023F1Q5   D2A0S5   A0A224XSD2   A0A067RDD8   A0A2J7R3B3   U4UJE2   T1I7Z2   J3JX50   A0A1Y1KWM7   W8BP01   A0A1A9WIU1   A0A2P8XV92   N6SRY5   A0A1A9V5D6   A0A1B0G7M5   A0A1Y1KWJ4   A0A1A9ZGK2   A0A1A9YKU8   A0A1B6DJW5   A0A182JCK3   Q16M73   A0A2M3Z1M9   A0A1I8Q4B6   A0A1B6GE33   A0A182L4U3   A0A2M4ATT2   A0A2M4ATK4   A0A2M4DMB0   A0A0Q9W3R2   A0A2M4DM74   B4LMT3   B4KN95   A0A1B0B7C5   A0A0Q9XBN3   A0A1B6I6L8   A0A0L0CN28   A0A2H8TZU1   E0W026   A0A1I8M3F6   A0A182TET0   A0NGL8   A0A182N3G4   A0A1L8E4R8   T1PIM4   A0A182QG16   A0A182FWA2   A0A1Q3G4Y5   A0A182US47   A0A1Q3G4V2   A0A034W7J8   A0A084WJ69   A0A1Q3G4X4   A0A1Q3G4T9   A0A0P5URS8   A0A182KBW6   A0A0P5M6Y6   A0A0P5FB50   A0A182W1U9   A0A2M4BUN4   A0A154NXX4   A0A1J1HL96   A0A182S6L4   A0A0P5S1K9   A0A182YL77   E2BHI2   A0A0P6F5S3   A0A0N8DXQ1   A0A0P6B9B8   A0A0A1WKF5   A0A0P6ELA1   A0A0P5KCF4   A0A0P5XWX9   A0A182P525   A0A0N8ABZ9   A0A0P5VKI7   A0A182MKR6   A0A0P6HUT1   B3MHL3   A0A182R7G5   A0A0P5RPH1   A0A0N8A5V5   A0A0P5RBI8   W5JWI1   A0A0K8U868   E9G0Q5   A0A232EN88   A0A1B0CDG0   C4WV09   B4MNQ4  

Pubmed

19121390    26227816    26354079    22651552    22118469    25474469    + More
18362917    19820115    24845553    23537049    22516182    28004739    24495485    29403074    17510324    20966253    17994087    18057021    26108605    20566863    25315136    12364791    25348373    24438588    25244985    20798317    25830018    20920257    23761445    21292972    28648823   

EMBL

BABH01016076    NWSH01000295    PCG77670.1    JTDY01008453    KOB64562.1    ODYU01000597    + More
SOQ35664.1    RSAL01000006    RVE54337.1    AP017502    BBB06796.1    GEYN01000186    JAV44803.1    KQ461185    KPJ07470.1    KQ459252    KPJ02149.1    AK401488    BAM18110.1    AGBW02013998    OWR42412.1    GBBI01003778    JAC14934.1    KQ971338    EFA02555.1    GFTR01005076    JAW11350.1    KK852773    KDR16815.1    NEVH01007822    PNF35328.1    KB632349    ERL93222.1    ACPB03011620    BT127818    AEE62780.1    GEZM01071484    GEZM01071481    GEZM01071480    GEZM01071479    GEZM01071477    GEZM01071476    GEZM01071471    GEZM01071467    JAV65772.1    GAMC01003685    GAMC01003684    JAC02871.1    PYGN01001295    PSN35928.1    APGK01059088    APGK01059089    KB741292    ENN70404.1    CCAG010016887    GEZM01071483    GEZM01071478    GEZM01071474    GEZM01071472    GEZM01071470    GEZM01071468    JAV65783.1    GEDC01025017    GEDC01023787    GEDC01017777    GEDC01012711    GEDC01011314    JAS12281.1    JAS13511.1    JAS19521.1    JAS24587.1    JAS25984.1    CH477874    EAT35430.1    GGFM01001665    MBW22416.1    GECZ01009099    JAS60670.1    GGFK01010801    MBW44122.1    GGFK01010800    MBW44121.1    GGFL01014487    MBW78665.1    CH940648    KRF79737.1    GGFL01014488    MBW78666.1    EDW61024.2    CH933808    EDW09948.1    KRG04999.1    KRG05000.1    JXJN01009530    JXJN01009531    KRG05001.1    GECU01025134    JAS82572.1    JRES01000171    KNC33691.1    GFXV01007625    MBW19430.1    DS235855    EEB18982.1    AAAB01008986    EAL38858.2    GFDF01000460    JAV13624.1    KA648509    AFP63138.1    AXCN02001109    GFDL01000216    JAV34829.1    GFDL01000214    JAV34831.1    GAKP01009224    JAC49728.1    ATLV01023975    KE525347    KFB50263.1    GFDL01000226    JAV34819.1    GFDL01000228    JAV34817.1    GDIP01109307    JAL94407.1    GDIQ01159830    JAK91895.1    GDIP01149701    JAJ73701.1    GGFJ01007636    MBW56777.1    KQ434778    KZC04431.1    CVRI01000009    CRK88707.1    GDIQ01094250    JAL57476.1    GL448301    EFN84835.1    GDIQ01060973    JAN33764.1    GDIQ01081660    JAN13077.1    GDIP01018424    JAM85291.1    GBXI01015434    JAC98857.1    GDIQ01060974    JAN33763.1    GDIQ01191567    GDIP01077802    JAK60158.1    JAM25913.1    GDIP01066214    JAM37501.1    GDIP01162345    JAJ61057.1    GDIP01113563    JAL90151.1    AXCM01005693    GDIQ01038530    JAN56207.1    CH902619    EDV35849.1    KPU75859.1    GDIQ01097860    JAL53866.1    GDIP01179497    JAJ43905.1    GDIQ01108245    JAL43481.1    ADMH02000153    ETN67590.1    GDHF01029568    JAI22746.1    GL732528    EFX86945.1    NNAY01003205    OXU19796.1    AJWK01007802    AK341306    BAH71729.1    CH963848    EDW73743.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000283053    UP000053240    UP000053268    + More
UP000007151    UP000007266    UP000027135    UP000235965    UP000030742    UP000015103    UP000091820    UP000245037    UP000019118    UP000078200    UP000092444    UP000092445    UP000092443    UP000075880    UP000008820    UP000095300    UP000075882    UP000008792    UP000009192    UP000092460    UP000037069    UP000009046    UP000095301    UP000075902    UP000007062    UP000075884    UP000075886    UP000069272    UP000075903    UP000030765    UP000075881    UP000075920    UP000076502    UP000183832    UP000075901    UP000076408    UP000008237    UP000075885    UP000075883    UP000007801    UP000075900    UP000000673    UP000000305    UP000215335    UP000092461    UP000007798   

PRIDE

H9JRB4   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JRB4   A0A2A4K1X6   A0A0L7KMP1   A0A2H1V5W5   A0A3S2LUZ1   A0A2Z5U787   + More
A0A1Q3G5H5   A0A194QR71   A0A194Q9R5   I4DJM0   A0A212ELP5   A0A023F1Q5   D2A0S5   A0A224XSD2   A0A067RDD8   A0A2J7R3B3   U4UJE2   T1I7Z2   J3JX50   A0A1Y1KWM7   W8BP01   A0A1A9WIU1   A0A2P8XV92   N6SRY5   A0A1A9V5D6   A0A1B0G7M5   A0A1Y1KWJ4   A0A1A9ZGK2   A0A1A9YKU8   A0A1B6DJW5   A0A182JCK3   Q16M73   A0A2M3Z1M9   A0A1I8Q4B6   A0A1B6GE33   A0A182L4U3   A0A2M4ATT2   A0A2M4ATK4   A0A2M4DMB0   A0A0Q9W3R2   A0A2M4DM74   B4LMT3   B4KN95   A0A1B0B7C5   A0A0Q9XBN3   A0A1B6I6L8   A0A0L0CN28   A0A2H8TZU1   E0W026   A0A1I8M3F6   A0A182TET0   A0NGL8   A0A182N3G4   A0A1L8E4R8   T1PIM4   A0A182QG16   A0A182FWA2   A0A1Q3G4Y5   A0A182US47   A0A1Q3G4V2   A0A034W7J8   A0A084WJ69   A0A1Q3G4X4   A0A1Q3G4T9   A0A0P5URS8   A0A182KBW6   A0A0P5M6Y6   A0A0P5FB50   A0A182W1U9   A0A2M4BUN4   A0A154NXX4   A0A1J1HL96   A0A182S6L4   A0A0P5S1K9   A0A182YL77   E2BHI2   A0A0P6F5S3   A0A0N8DXQ1   A0A0P6B9B8   A0A0A1WKF5   A0A0P6ELA1   A0A0P5KCF4   A0A0P5XWX9   A0A182P525   A0A0N8ABZ9   A0A0P5VKI7   A0A182MKR6   A0A0P6HUT1   B3MHL3   A0A182R7G5   A0A0P5RPH1   A0A0N8A5V5   A0A0P5RBI8   W5JWI1   A0A0K8U868   E9G0Q5   A0A232EN88   A0A1B0CDG0   C4WV09   B4MNQ4  

PDB

3RD5     E-value=2.51396e-28,     Score=312

KEGG

101738147    no KO assigned | (RefSeq) retinol dehydrogenase 11-like

GO

GO:0016021   GO:0016491   GO:0016630  

Length:

351

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.44451999999999

Exp number, first 60 AAs:

8.42504

Total prob of N-in:

0.43555

outside

1  -  351

 

 

Pi

17.621168

Theta

14.794717

Tajima's D

0.340337

CLR

0.245809

CSRT

0.474976251187441

Interpretation

Uncertain