SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06870  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012083
Annotation
PREDICTED:_ancient_ubiquitous_protein_1-like_[Bombyx_mori]
Full name
Ancient ubiquitous protein 1      
Location in the cell
PlasmaMembrane   Reliability : 3.681
 

Sequence

CDS
ATGGCTCTTGCGGCAGAAAAGTTAATCAACAAAGAGAGATTCAATGGAGAAAATGCATTGCAATTTTTACTGTATTTACCAATTGGAGTTATTCTGATGGTGATCAGAATATTCCTGGGTGTGATATTATGGATTGCATCAATTATATTGCCCAACAAATGGGCAGTCAGTCACATGTTAACTACTTTGGCTTGTTGGACTTTTGGTGTCTATGTGAAGCTCAAAGGACAAAGAGACCCAAGATGTAGTGTGTTGGTTGCTAACTATGTGACATGTTTCGATTCTCTTGCAGCTGCACATGTCTTTGGTACCATAAGTTTGAAAAGATGGAAGTTGCCACCATTTTTCGCATCGACGTTGGGTATAAAGAACGCCTCACAATTTTCTAAAAAGCAACATTTCTCTGAGGTGCCAACAAAGCCTGTGTTGATACAACCAGAAAGTGGACCCACGAACGGTAAAGCGGTGTTACGTTTCACAGATTGGCCATTCCAGATTAAAAGCAATGTGCAGCCGGTCGCCATCACCGTGGAGCGCGCCTTCACGCGTGCGACGGTGCAGCGGCGCCAGTACAGCGCGCGCTTCCCGTGGCGCGACGCGGCGTGGTTCCTGCTGTCGCCCGCCACCGTGTACACGCTGCACGCGCTGCCGCCGCTGCGCTGGGACGCGGGGGACGTCGGGGACCGCTGCCGGGCCGCCGTCGCAGAGGCGCTGCAGGTGGAAGTGTCGGAGCTGACGTGGGACGAGTTGTTCGCGGGGAGGCGTGTCCGGGCCGTCGCCGACCGCGCCGCCCCGCTCGTGCGCCTCGGGAACCAGGTCAAGGAAGTGTTGCCAGCCGTCCCACTCAAAACTATCCTCCAGGATTTAGGTGTGTTTCGGCGCAGAATCGGCGTGGACACCCTCGCCGAGTGTTGCCATGTTTTTTTTTTTTTAGAGTCCTTTGATGGGTGGACGAGCTCACAGCCCACCTGGTGTTAA
Protein
MALAAEKLINKERFNGENALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTLGIKNASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQRRQYSARFPWRDAAWFLLSPATVYTLHALPPLRWDAGDVGDRCRAAVAEALQVEVSELTWDELFAGRRVRAVADRAAPLVRLGNQVKEVLPAVPLKTILQDLGVFRRRIGVDTLAECCHVFFFLESFDGWTSSQPTWC

Summary

Description
May play a role in the translocation of terminally misfolded proteins from the endoplasmic reticulum lumen to the cytoplasm and their degradation by the proteasome.
Similarity
Belongs to the AUP1 family.
Keywords
Endoplasmic reticulum   Membrane   Transmembrane   Transmembrane helix   Ubl conjugation pathway  
Feature
chain  Ancient ubiquitous protein 1
EMBL
NWSH01000052    PCG80176.1    RSAL01000006    RVE54334.1    AGBW02009812    OWR49859.1    + More
KQ459252    KPJ02155.1    KQ461185    KPJ07465.1    KQ971361    EFA08762.1    AAGJ04129253    NEVH01011922    PNF31095.1    GFAH01000076    JAV48313.1    GEZM01016146    JAV91364.1    GEZM01016147    JAV91362.1    GBGD01001612    JAC87277.1    PNF31096.1    GFTR01006027    JAW10399.1    GBBI01000774    JAC17938.1    ACPB03009974    GAHY01001043    JAA76467.1    GDKW01000097    JAI56498.1    GECL01003066    JAP03058.1    AEYP01010579    UZAH01029663    VDP07275.1    KZ288374    PBC26709.1    BC129705    BC160678    ADTU01001748    CM004467    OCT96447.1    GG666484    EEN65072.1    LBMM01006854    KMQ90275.1    GL435158    EFN73939.1    JP006246    AER94843.1    LJIG01009574    KRT82808.1    KQ976398    KYM92702.1    HADZ01012662    SBP76603.1    GEBQ01029806    JAT10171.1    APGK01042192    KB741002    KB631903    ENN75747.1    ERL87036.1    GECZ01012276    JAS57493.1    KQ980905    KYN11522.1    LIAE01009369    PAV70041.1    PAV70040.1    HADY01009499    SBP47984.1    GL888070    EGI68215.1    UZAF01017095    VDO37860.1    PAV70039.1    CAVP010059635    CDL95955.1    GBYX01440132    JAO41231.1    HAEC01010912    SBQ79128.1    KQ419338    KOF83912.1    HAEF01014821    SBR55980.1    GCES01161149    JAQ25173.1    PAV70038.1    JARO02007574    KPP63794.1    KQ982662    KYQ52647.1    HADX01014430    SBP36662.1    GL450732    EFN80589.1    LN609528    CEF64370.1    NHOQ01001578    PWA23482.1    MCFN01000982    OXB54121.1    HAEB01019811    SBQ66338.1    HAEF01002135    HAEG01008467    SBR81945.1    HADZ01005287    HAEA01015844    SBQ44325.1    HAEI01004260    HAEH01021019    SBS11683.1    GCES01130573    JAQ55749.1    HADY01023465    HAEJ01010811    SBP61950.1    CP026255    AWP12470.1    JARK01000147    EYC42001.1    AWP12469.1    AWGT02000675    OXB71065.1    KQ977259    KYN04605.1    KQ042260    KKF16702.1    HAED01001599    HAEE01016879    SBR36929.1    KQ981979    KYN31311.1    AWP12471.1   
Pfam
PF02845   CUE
Interpro
IPR003892   CUE        + More
IPR002123   Plipid/glycerol_acylTrfase       
IPR006155   Josephin       

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Length:
325
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
64.8835100000002
Exp number, first 60 AAs:
30.77496
Total prob of N-in:
0.98947
POSSIBLE N-term signal
sequence
inside
1  -  21
TMhelix
22  -  44
outside
45  -  53
TMhelix
54  -  72
inside
73  -  84
TMhelix
85  -  107
outside
108  -  325
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
33.892833
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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