Gene
KWMTBOMO06864
Annotation
reverse_transcriptase_[Danaus_plexippus]
Location in the cell
Mitochondrial Reliability : 1.114 Nuclear Reliability : 1.308
Sequence
CDS
ATGATGGCAAAGTTTTTAAAAAATTTACCCCAGGAGGGTACCACCTTAGGTGGAGAATCCCTCCGTGCTTCCATCTCGGTGGGAGCACGCTGCCCCGCGTATTCTGGGGGGGGCAAAGCTTGCCATGACGAAGGGGGCTGTGTGACGGGCAGCGGAAAACCCGTCGAACAGAGACACGCCAGCGCTGACTTGACGCACTCTGGGCACGTCAGTGACAGCGAGGCGGCTGGCTCGAAAGAGACAACCGCCAAAAAGATAAGGCGGAAAAGGAAGACCCAGCGAGTTTCTTCACGCGAGGGGGGAGGGGAGCCAACGTCATCCTCTGGCGCAGATGCCCCGCCGGAGAAGGTTCTGGTAGTCTCCGATGCGGCCTCTGCTGCGGAGGAGATGCCGCCCCCAAAAGGAAGACCCGCCCGGAGGAGGGGCGCGCCGTCACCGGCGCAGTCATCGGCGTCGATGTCTGTCGCCTCACTGGACGGGCGAACGACAGAGGAGGAAGAAGGCGGCCTTCAAGACCCTGCCTTGGTCATAGACAGGGCCATGAGGACCGTCAAGTCATATGCGGCCAACGGCACTAAGACCAAAGCCGCTGGCCGTAAGCTGCGAGAGGTAGTCTCGCAGGTCTCGAAGGTTCTGCCTTCGGTTGCTTCCGCCAATGACCAGGTGGTACAGCTGATGGCGGAGAATTCGAGGCTTCGAGCACTACTTCAAGCCCAACAGCAGCCTGATGATGAGGCTTCTGCTTCGAGTAAGGCAGCGGCGTCGACGCCGTCGCCCGCGTTGCCCCGGGCCACTGGGTTGCGAACTCCACCGGCCCATGTACCGGCAGCGACGTCATGTATCACCGGGGCGTCTCAGAAGCGCCGTTCCCCGGCGCTGACTGGCGATGGGTGGCCTGTGCTGCCGCCACCGCGCGCGGCTGAGCAGCGGCCACGTCTCCCGTCGCCGCGCACTAGGGAGATGACCGCTACCAAGCGGCAGCAAGCACTCGTAGGGCCACGGGAGCTGACTGGAAAATTCAGCCTGGACGAGGTCATCAGTCGCACCGTCCAGGTTGTATTAGAAAGGCTGGACGGCAGGCTGGCGGCCCTCGAGGCGCAGCTCATTGCTCCGGCTGACGCTCGGCGACCGGCATATGCCGCAGTGTCGGGTACTCCAGCCGCTCGCCCCGCCCCCGTACGGGCTCCAGCCACTAGGTTGGGCCCGGGACGGGATAGAACCAAGCGGGGGGGGGGCACCAACGCGAAGTGCCCATCGCAAGCACCCCAGCCTCGTCCGCTGCCTCCGCCCCCGTCTAACATGGACGAAGGGTGGAACGTGGTGGCCCGGCGGGGTGCCAAGAAGGCTCCACCAGCAGCTGCACAAGTTGGTAGAGCGCCAGCGGCTACAGCGGCTCAGCAACCGCGCGCGCCGCGGTCGGCGGCAGTGGTCCTAACGCTGCTGCCGGCTGCCAAAGCTAAGGGCATGACATACGGAGATGTCATTGCTCGGGCGCGCGCGGCAGTTGACCTGGATGAGATCGGGGCGGGGGAGGGCCTCCGCTGTAGGCAGACAGCCAATGGGGCCAAACTGCTAGAATGTCCCGTTGCCGATAGTCCCGGCATCGCGGAGCGTCTGGCGGCAAGGCTCCGTATGGTCCTGCCTGAAGAGGAGGTGCGGGTGCATAGGCCGGTCAAGATGGCCGAATTGAAAGTGACCGGCCTGGACGACTGCACCACCAGGGAGGAGGTGGCGGCGGCCGTCGCTGCCCAGGGCAACTGTGCCCTGCAGAACATAACAGTAGGCGAGCTGCGCTCCGGTTATACCGGGGCTGGTTCCGTGTGGGTACGTTGCCCGGTGGAGGCGGCCGTTGCCCTGGCTGCTCCTCCGCCCGGGAGACCGTCGGGGGATCCGGGCAGGTTGCGCGTGGGCTGGATAGCAGCCCACGTGCGCCTGCTAGAACCGCGTGCCTGGCGGTGCCTAAGGTGCTTCAGCACTGGGCACTGCCTCGCCAGGTGCGTGAGTGCGGTTGACCGCAGCGGACTGTGCTTCCGCTGTGGTCAGCCTGGACACAAGGCGGCCGTGTGCTTGGCTGCGCCGCATTGTTCGTTATGTGCGGCGGCCGGACGCAAGGCTGACCACCGGACCGGGGGCAAGGCATGCCCCCCGGCCGGCAAAAATGCAATTAGAAATTGGCGCCGCCAAGCTAAGCGTCGCCAAAAGAAGCGGTCGGCCGGGGGAGCACCGGCTGGCACTTTGGCCCCCGCTGAGGCGTTCGAGCCCGATAGCGGGGACAATAGAGTAGGGGAGGGGGCGATGGATGTGGTCCAGGACATGCTGCTCCAGACTATGGCGGAGTGGTCAATTGACGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCAGCGGACGACTGCTGGTTTGGGGACGTTGATGGCTTGGCGGCCATACATATAAGAAGATCCGCGATGATTCCTCCCCTGGCGATGGTGACCAGGGGCCCCGGGATCGTCGCGGTACAATTAGAAAATACCGTCGTGATCGGGGTGTACTTCTCTCCAAATCGGCCTACCGTCGAGTTCGAGCGGTTTCTGGACGGGCTAGAGGTGATCGCTCGTCACCTCTCTCCCCGTTCGGTAATACTGGCGGGGGACTTCAATGCGAAGTCTGTCGCTTGGGGTTCCCCATCCACGGACGCTCGTGGTAGGCTGTTGGAGGAGTGGGCGGTCGCGGCCGATCTCTGTATCGTTAACAGGGGCTCGGTCGCGACATGCGTGCGGTGGACGGGAGAGTCTATCGTGGACTTGACGTTCGCGAGCTCGTCCATCGCACAGCGCATCCTCGGCTGGGGCGTGGTGGTGGGGGCGGAATCGTTGTCGGATCATCGGTGGGCATTGAAGCTCCTGAAGAAGGAGCTCCTGGTGGAGGCCTCTATGGTGGCGGCGTGGACGCCCATGCGCCCACACCCTTTCGATGTGGAGGCTGAGGCCGAATGGTTCCGCGGCGCGATGCACCGCATATGCGATGCCTCGATGCCCCGGGTCGGCCCTCGGCATTGCGGACGGCGGCAGTCGCCCTGGTGGTCGCCTGAAATTGCGAGATTGCGTGCAGTCTCCATTCGGGCGAGCCGCCAGTGTGCTAGACACCGCCGTCGCCGTCACCTGCGGCGCGACGACCCCGTCGCGTTCGCAGAGGAGGAGACCCGGCTGCACGGCGAATATCGCGCTGCGAAGGACGCCCTGCGGCTGGCCATCAGGCGGGCCAAGGAGCAGAACATGGAGAGACTCTTGGAGGCGCTCGAAGCGGATCCATGGGGGAGCCCGTACAGGCTGGAGCGGGAGGGTTTTGTTCCCCCCGCTATGGGTGAGCCGTCGGACGCCATCGACGGCGAAGCCCCTGCTGAGGTGCCCCATATTACTGGGGCAGAGCTCCGTGTGGCCGTTGTCAGGATGACTGCAAAGGACACGGCCCCCGGCCCGGACGGAGTCCATGGTCGGGTGCTGGCCTTGGCCCTCGATGCCCTAGGGGACCGGCTCCTGGAGCTATTTAATGGTTGCCTGGAGTCGGGACGGTTTCCGTTGCTCTGGCGGACGGGCAGACTTGTGCTGTTGAAAAAGGAGGGGCGCCCGATGGATACAGCCGCCGGGTATCGTCCTATCGTACTGCTGGACGAGGCGGGAAAATTGCTGGAGCGTATTCTGGCTGCCCGCATCGTTCAGCACCTGGTCGGGGTTGGACCTGACCTGTCGGCGGAGCAGTTCGGCTTCCGGGAGGGCCGTTCGACCGTGGATGCAATTCTTCGCGTGCGGGCCCTCTCGGACGAGGCTGTCTCACGGGGTGGGGTGGCACTGGCGGTGTCTCTTGACATCGCCAACGCATTTAACACCCTGCCCTGGTCTGTGATAGGGGGGGCACTGGAGAGGCATGGGGTGCCCCTCTACCTCCGCCGGCTGGTTGGCTCCTATTTGGAGGCCAGGTCGGTCGAATGTACCGGGTACGGTGGGACCCTTCACCGTTTTCCGGTCGTGCGTGGTGTTCCGCAGGGGTCGGTTCTCGGACCCCTCTTGTGGAACATCGGGTACGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGTCTCCGCGTTATTTGTTACGCGGACGACACGTTGGTCGTGGCCCGGGGGGATGATTATAGAGAGTCTGCCCGTCTCGCCACAGCGGGAGTGGCCCTCGTCGTCGGGAGGATCAAGAGACTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCTTGTGGTTTCACGGGCCGCGGAGAGCGCCACCTGTCGACGCCCACATCGTGGTTGGGGGCGTCCGGATAGGGGTCGGGGTGCAGTTAAGGTACCTCGGCCTCGTGTTGGACGGCCGGTGGGCTTTTCGTGCTCACTTTGCGGAGCTGGTCCCTCGATTAATGAGGACAGCCGGTTCTTTGAACCGACTGCTCCCGAATATCGGGGGGCCGGATCAGGTTGTACGCCGCCTCTACGCTGGGGTGGTGCGATCGATGGCCCTGTACGGTGCGCCTGTATGGGCTGAGCCGCGCAATCGGGCTACTATGGCTCGGTTCCTGCGCCGGCCGCAGCGCACCGTTGCTATCAGGGTCATCCGTGGATATCGCACCGTCTCATTCGAGGCGGCGTGTGTGTTGGCGGGGACGCCGCCATGGGAGCTGGAGGCGGAGTCGCTCGCTGCCGACTATCGGTGGCGCAGTGAGCTTCGTGCTCTGGGCGTGGCGCGTCCCTCCAAAAGTGAGCTGCGGGCGCGGAAGGCCCATTCTCGGCGGTCCGTGCTCGAATCGTGGTCGAGGCGGTTGGCCAATCCCACGTGGGGTCTACGGACCGTCGAGGCGGTTTACCCGGTCTTTTATGACTGGGTGAATCGTGGCCGAGGACGCCTCACCTTCCGTCTGGTGCAGGTGCTGACTGGGCACGGATGCTTTGGAAAGTACCTGCACCGGATAGGAGCTGAGCCGACGACGAGGTGCCACCATTGTGGACACGACCTGGACACGGCGGAGCATACGCTCGCTGTCTGCCCCGCTTGGGAGGTGCAGCGCCGTGTCCTTGTCGCAAAGATAGGACCAGACTTGTCGCTGCCTGGCGTCGTGGCGTCGATGCTTGGCGGCGACGAGTCTTGGAAGGCTATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGAGTGAGGCAAAGCTCTCCTCACTACGCAGAAACCCGCCGCCGCCGAGCAGGGGGTCGGGATCGGGGTCCCGTCCGTAACCCGGCCCCCTAA
Protein
MMAKFLKNLPQEGTTLGGESLRASISVGARCPAYSGGGKACHDEGGCVTGSGKPVEQRHASADLTHSGHVSDSEAAGSKETTAKKIRRKRKTQRVSSREGGGEPTSSSGADAPPEKVLVVSDAASAAEEMPPPKGRPARRRGAPSPAQSSASMSVASLDGRTTEEEEGGLQDPALVIDRAMRTVKSYAANGTKTKAAGRKLREVVSQVSKVLPSVASANDQVVQLMAENSRLRALLQAQQQPDDEASASSKAAASTPSPALPRATGLRTPPAHVPAATSCITGASQKRRSPALTGDGWPVLPPPRAAEQRPRLPSPRTREMTATKRQQALVGPRELTGKFSLDEVISRTVQVVLERLDGRLAALEAQLIAPADARRPAYAAVSGTPAARPAPVRAPATRLGPGRDRTKRGGGTNAKCPSQAPQPRPLPPPPSNMDEGWNVVARRGAKKAPPAAAQVGRAPAATAAQQPRAPRSAAVVLTLLPAAKAKGMTYGDVIARARAAVDLDEIGAGEGLRCRQTANGAKLLECPVADSPGIAERLAARLRMVLPEEEVRVHRPVKMAELKVTGLDDCTTREEVAAAVAAQGNCALQNITVGELRSGYTGAGSVWVRCPVEAAVALAAPPPGRPSGDPGRLRVGWIAAHVRLLEPRAWRCLRCFSTGHCLARCVSAVDRSGLCFRCGQPGHKAAVCLAAPHCSLCAAAGRKADHRTGGKACPPAGKNAIRNWRRQAKRRQKKRSAGGAPAGTLAPAEAFEPDSGDNRVGEGAMDVVQDMLLQTMAEWSIDVAVVAEPYFVPPADDCWFGDVDGLAAIHIRRSAMIPPLAMVTRGPGIVAVQLENTVVIGVYFSPNRPTVEFERFLDGLEVIARHLSPRSVILAGDFNAKSVAWGSPSTDARGRLLEEWAVAADLCIVNRGSVATCVRWTGESIVDLTFASSSIAQRILGWGVVVGAESLSDHRWALKLLKKELLVEASMVAAWTPMRPHPFDVEAEAEWFRGAMHRICDASMPRVGPRHCGRRQSPWWSPEIARLRAVSIRASRQCARHRRRRHLRRDDPVAFAEEETRLHGEYRAAKDALRLAIRRAKEQNMERLLEALEADPWGSPYRLEREGFVPPAMGEPSDAIDGEAPAEVPHITGAELRVAVVRMTAKDTAPGPDGVHGRVLALALDALGDRLLELFNGCLESGRFPLLWRTGRLVLLKKEGRPMDTAAGYRPIVLLDEAGKLLERILAARIVQHLVGVGPDLSAEQFGFREGRSTVDAILRVRALSDEAVSRGGVALAVSLDIANAFNTLPWSVIGGALERHGVPLYLRRLVGSYLEARSVECTGYGGTLHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLRVICYADDTLVVARGDDYRESARLATAGVALVVGRIKRLGLDVALSKSEALWFHGPRRAPPVDAHIVVGGVRIGVGVQLRYLGLVLDGRWAFRAHFAELVPRLMRTAGSLNRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYRWRSELRALGVARPSKSELRARKAHSRRSVLESWSRRLANPTWGLRTVEAVYPVFYDWVNRGRGRLTFRLVQVLTGHGCFGKYLHRIGAEPTTRCHHCGHDLDTAEHTLAVCPAWEVQRRVLVAKIGPDLSLPGVVASMLGGDESWKAMLDFCECTISQKEAAGRVRQSSPHYAETRRRRAGGRDRGPVRNPAP
Summary
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
1WDU
E-value=3.60753e-09,
Score=153
Ontologies
GO
Topology
Length:
1759
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.012
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1 - 1759
Population Genetic Test Statistics
Pi
0.035444
Theta
0.250648
Tajima's D
-1.953443
CLR
25.571442
CSRT
0
Interpretation
Uncertain
