Gene

KWMTBOMO06857

Annotation

IS5_transposase_and_trans-activator_[Escherichia_coli_K-12]

Location

Bomo_Chr11(-):17679025-17680156      View in EpiBrowser

Full name

Transposase InsH for insertion sequence element IS5-18       + More
Transposase InsH for insertion sequence element IS5-17      
Transposase InsH for insertion sequence element IS5-16      
Transposase InsH for insertion sequence element IS5-15      
Transposase InsH for insertion sequence element IS5-14      
Transposase InsH for insertion sequence element IS5-13      
Transposase InsH for insertion sequence element IS5LO      
Transposase InsH for insertion sequence element IS5K      
Transposase InsH for insertion sequence element IS5I      
Transposase InsH for insertion sequence element IS5F      
Transposase InsH for insertion sequence element IS5D      
Transposase InsH for insertion sequence element IS5B      
Transposase InsH for insertion sequence element IS5A      
Transposase InsH for insertion sequence element IS5U      
Transposase InsH for insertion sequence element IS5-12      
Transposase InsH for insertion sequence element IS5T      
Transposase InsH for insertion sequence element IS5R      

Location in the cell

Mitochondrial   Reliability : 2.73

CDS

ATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA

Protein

MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH

Description

Involved in the transposition of the insertion sequence IS5.

Similarity

Belongs to the transposase 11 family.

Keywords

Complete proteome   DNA recombination   DNA-binding   Transposable element   Transposition   Reference proteome  

Feature

chain  Transposase InsH for insertion sequence element IS5-18

Uniprot

D3UFN6   A0A1C0LFB2   A0A1D3BEY0   A0A1C2QQY3   A0A140N8I8   S1IAA9   + More
A0A094VGY2   A0A0P8HCV6   W8EA93   A0A2S1PIE6   A0A1S5Y2P3   A0A0E9FSU4   A0A2R4PF89   A0A2S1PI81   Q38213   P0CE65   P0CE64   P0CE63   P0CE62   P0CE61   P0CE60   A0A2C5TVS6   A0A376FQ60   A0A2Z3XET9   Q2G049   A0A249WSS7   G0ZKW3   A0A0G3VJM3   A0A2S5ZIN6   A0A220QDV5   A0A2K9V1T6   A0A2R4PF54   A0A0E3DSZ8   V9TV93   Q7A238   A0A3I6I7I5   A0A068LCK2   G4WHZ4   P0CE56   P0CE55   P0CE54   P0CE52   P0CE51   P0CE50   P0CE49   A0A385XJE6   P0CE59   P0CE58   P0CE57   A0A3R1HAB9   A0A2I8D1T0   A0A097R6J0   S1D2T2   A0A0J1R1L6   A0A069XTN7   A0A2N4W112   W9A114   A0A376F7H5   A0A2R4TSK0   A0A3S4PCD6   S1I118   T9DC24   A0A0J1JKI4   A0A160EZW2   A0A0A0FKR8   A0A1Z3MMF1   A0A0F6RI69   W8EAJ1   A0A0J1ZMJ8   A0A0K2CSH3   A0A222ZD84   A0A2S1XX48   A0A220DIN9   A0A2H4ZH88   U5TW71   A0A377MYD5   A0A376QQM4   A0A0D7LM48   A0A023RPD5   A0A3S5Z752   A0A3D1C3V8   V3D130   A0A220QC06   A0A1D6Y627   A0A220DIE5   A0A0C5GST7   A0A2K7ZIQ7   A0A2I8TPM0   A0A3S0IIF3   A0A387D056   A0A3Q8DMW5   F4SFT0   A0A2S4TIC0   A0A1X3J9B5   A0A236IEV7   A0A023RN73   A0A249WSP4   A0A2W0FX06   L0L7Y1   A0A2I8XPT6  

Pubmed

20219135    28636609    6281654    9097039    9097040    16738553    + More
21751098    26983001    29373691    25845877    24312580    4876466    6309744    6325393    2989253    3277947    2840681    2013575    8078071    8645296    12029035    24466089    26546427    28596758    21291614    8041620    9278503    6269959    6269958    29437920    25075225    29029188    25126841    26888898    23377788    26260129    25559999    26056157    23144426    30148503    25421477    23579399    26047502   

EMBL

FN555004    CBG39307.1    LJDX02000010    OCO27594.1    LJEY02000209    OEH10115.1    + More
MDIK01000504    OCZ19602.1    CP001665    ACT27825.1    ASVJ01000031    EOW24687.1    AB812023    UGBV01000003    UGGI01000001    BAQ01085.1    STH75058.1    STH75641.1    STH76010.1    STH76395.1    STH76765.1    STH76851.1    STH76969.1    STH78043.1    STH78755.1    STH78971.1    STH79254.1    STH79303.1    STH79444.1    STH79622.1    STQ37189.1    LJEB01000108    LJES02000051    LJET02000234    NEEZ01000050    KPR51961.1    OCO59440.1    OEH20731.1    OYQ91919.1    KF732966    UWVP01000003    AHJ80612.1    VCW85167.1    MG833406    AWH58229.1    KX236307    AQQ75385.1    CVOD01000449    CRH85807.1    MG252892    AVX50321.1    MG833404    AWH58106.1    J01735    AAA92016.1    AP009048    AJ001620    PDLE01000001    PHH11232.1    UFYI01000007    STD27756.1    CP029731    AWS99224.1    CP000253    ABD29907.1    JF300162    AEL16981.1    KR351290    CP023554    AKL80064.1    ATO02480.1    CP032938    PSSV01000017    PSSV01000016    PSSV01000009    PSSV01000006    PSSV01000005    AYM25205.1    PPI89780.1    PPI89855.1    PPI89958.1    PPI90016.1    PPI90051.1    PPI90861.1    PPI91083.1    PPI93377.1    PPI94820.1    PPI94876.1    PPI94990.1    PPI95532.1    PPI95536.1    CP022273    ASJ98841.1    ASJ99325.1    ASK03212.1    MF679147    AUV51271.1    MG462729    AVX50272.1    KJ812998    AIM48568.1    CP002178    AHC73230.1    AP004237    BAB93599.1    KF982315    KT942695    KY686302    AIE43988.1    ALS91368.1    ARW71211.1    HQ416416    QVGE01000002    AEP32438.1    RFM41375.1    U28377    U00096    U82598    J01734    U70214    U00039    U18997    RCUO01007636    MNC12475.1    CP026122    AUT40998.1    CP009706    AIU74336.1    ASUV01000065    EOV53135.1    LESR01000009    KLV83745.1    JNMS01000001    KDU33274.1    NCPU01000042    PLJ03988.1    HG941718    CDN85177.1    UFYI01000005    STD17537.1    STD18009.1    STD18678.1    STD19226.1    STD19270.1    STD19669.1    STD21100.1    STD22499.1    STD22711.1    STD23386.1    STD25296.1    CP028568    AWA04809.1    AWA04813.1    AWA05468.1    AWA06330.1    AWA07865.1    AWA08187.1    LR134253    VED45536.1    VED46592.1    VED48144.1    VED48953.1    VED49576.1    VED50228.1    VED51408.1    VED51533.1    VED53289.1    ASVJ01000081    ASVJ01000079    ASVJ01000059    ASVJ01000017    ASVJ01000015    EOW16752.1    EOW17063.1    EOW20512.1    EOW28233.1    EOW28533.1    AWCM01000062    AWCM01000060    EQY14458.1    EQY14966.1    EQY14984.1    LESM01000015    LESM01000003    KLV38466.1    KLV46865.1    CP014774    ANB53865.1    ANB53939.1    ANB55126.1    ANB55130.1    ANB55196.1    ANB55228.1    ANB55230.1    ANB55235.1    ANB55237.1    JPKI01000004    JPKI01000001    KGM57975.1    KGM62147.1    KY913899    UGNA01000002    UGNA01000004    ASD48984.1    STW26165.1    STW26281.1    STW27753.1    STW27801.1    STW28223.1    STW28689.1    STW30894.1    CP011132    AKE58533.1    AKE60635.1    AKE61226.1    AKE61548.1    KF877335    UGJW01000003    UGJW01000004    AHJ80702.1    STR70734.1    STT62360.1    CP025401    MOIL01000023    MOKA01000167    UFZG01000001    UFZL01000001    UGBX01000001    UGCP01000002    UGET01000004    UINP01000018    UWXG01000003    AUG93711.1    OJP11470.1    OJR06705.1    STE30437.1    STE54642.1    STH85941.1    STH87555.1    STI81999.1    STI83188.1    STI85366.1    STI85419.1    STI85903.1    STI86067.1    STI86453.1    STI86502.1    STI86991.1    STI87725.1    STI88145.1    STL74429.1    STL76039.1    STL82834.1    STQ33862.1    SVF38503.1    VCZ14043.1    KP987216    NGRD01000003    NGRD01000001    ALA08836.1    OUE63008.1    OUE72413.1    OUE73322.1    OUE73396.1    OUE74541.1    KY978629    ASR82120.1    MH105050    AWJ96249.1    KX832929    ARV76152.1    MF788071    AUF80622.1    KF220657    KM400601    AGZ05399.1    AKB96445.1    STQ35583.1    UGBZ01000001    STH93590.1    JYFZ02000001    KJC07325.1    CP007567    AHX62810.1    JTBG02000005    JTBG02000004    PNO59673.1    PNO62261.1    PNO62264.1    DOZY01000108    HCC76068.1    AYID01000025    ESL70247.1    ASK02200.1    KT852335    ALS38935.1    KX832928    ARV76056.1    KJ958926    AJP18432.1    CP007448    AHM74473.2    CP026238    AUV44888.1    CP026217    AUZ74425.1    GL883781    EGI12228.1    PQLN01000163    POV84771.1    ADJB01000092    OSL00886.1    SAYY01000019    RWU88272.1    AHX62996.1    QKNF01000003    QKNF01000001    PYZ20372.1    PYZ31037.1    PYZ31124.1    PYZ31287.1    PYZ31461.1    PYZ31468.1    PYZ31503.1    PYZ32380.1    PYZ32414.1    PYZ32864.1    PYZ34197.1    PYZ34218.1    KC149524    KF976405    KP765744    KR059865    NRQN01000147    AGB57365.1    AHN60537.1    AKJ21413.1    AKP49218.1    RLS12171.1    CP026282    CP026285    QMBO01000013    AUW08325.1    AUW08428.1    AUW14194.1    RAZ97594.1   

Proteomes

UP000001522    UP000050507    UP000050495    UP000094194    UP000002032    UP000014187    + More
UP000254480    UP000254870    UP000050305    UP000050510    UP000050520    UP000216811    UP000279455    UP000000318    UP000224601    UP000255163    UP000247938    UP000008816    UP000050263    UP000237650    UP000198232    UP000000625    UP000236451    UP000029986    UP000014122    UP000036589    UP000027892    UP000234454    UP000032727    UP000243999    UP000267630    UP000015992    UP000036585    UP000076809    UP000030015    UP000254738    UP000034085    UP000255111    UP000184355    UP000184459    UP000233584    UP000254079    UP000254255    UP000254972    UP000255201    UP000255209    UP000259784    UP000272353    UP000194801    UP000254050    UP000032554    UP000006592    UP000053768    UP000017344    UP000230961    UP000236347    UP000266786    UP000002795    UP000237244    UP000193045    UP000286346    UP000248077    UP000286016    UP000236441    UP000253701   

PRIDE

P0CE65    P0CE64    P0CE63    P0CE62    P0CE61    P0CE60    + More
P0CE56    P0CE55    P0CE54    P0CE52    P0CE51    P0CE50    P0CE49    P0CE59    P0CE58    P0CE57   

Pfam

PF01609   DDE_Tnp_1        + More
PF05598   DUF772

Interpro

IPR008490   Transposase_InsH_N        + More
IPR002559   Transposase_11       

ProteinModelPortal

D3UFN6   A0A1C0LFB2   A0A1D3BEY0   A0A1C2QQY3   A0A140N8I8   S1IAA9   + More
A0A094VGY2   A0A0P8HCV6   W8EA93   A0A2S1PIE6   A0A1S5Y2P3   A0A0E9FSU4   A0A2R4PF89   A0A2S1PI81   Q38213   P0CE65   P0CE64   P0CE63   P0CE62   P0CE61   P0CE60   A0A2C5TVS6   A0A376FQ60   A0A2Z3XET9   Q2G049   A0A249WSS7   G0ZKW3   A0A0G3VJM3   A0A2S5ZIN6   A0A220QDV5   A0A2K9V1T6   A0A2R4PF54   A0A0E3DSZ8   V9TV93   Q7A238   A0A3I6I7I5   A0A068LCK2   G4WHZ4   P0CE56   P0CE55   P0CE54   P0CE52   P0CE51   P0CE50   P0CE49   A0A385XJE6   P0CE59   P0CE58   P0CE57   A0A3R1HAB9   A0A2I8D1T0   A0A097R6J0   S1D2T2   A0A0J1R1L6   A0A069XTN7   A0A2N4W112   W9A114   A0A376F7H5   A0A2R4TSK0   A0A3S4PCD6   S1I118   T9DC24   A0A0J1JKI4   A0A160EZW2   A0A0A0FKR8   A0A1Z3MMF1   A0A0F6RI69   W8EAJ1   A0A0J1ZMJ8   A0A0K2CSH3   A0A222ZD84   A0A2S1XX48   A0A220DIN9   A0A2H4ZH88   U5TW71   A0A377MYD5   A0A376QQM4   A0A0D7LM48   A0A023RPD5   A0A3S5Z752   A0A3D1C3V8   V3D130   A0A220QC06   A0A1D6Y627   A0A220DIE5   A0A0C5GST7   A0A2K7ZIQ7   A0A2I8TPM0   A0A3S0IIF3   A0A387D056   A0A3Q8DMW5   F4SFT0   A0A2S4TIC0   A0A1X3J9B5   A0A236IEV7   A0A023RN73   A0A249WSP4   A0A2W0FX06   L0L7Y1   A0A2I8XPT6  

KEGG

NA   

GO

GO:0003677   GO:0006313   GO:0004803   GO:0003824   GO:0004713   GO:0043565   GO:0016567   GO:0016020   GO:0005634   GO:0006260  

Length:

326

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0169

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.01463

outside

1  -  326

 

 

Pi

6.777452

Theta

6.031339

Tajima's D

0.051444

CLR

1.568463

CSRT

0.404379781010949

Interpretation

Uncertain