Gene

KWMTBOMO06854

Pre Gene Modal

BGIBMGA012068

Annotation

PREDICTED:_multiple_C2_and_transmembrane_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr11(+):17652477-17661482      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.27 Nuclear   Reliability : 1.82 PlasmaMembrane   Reliability : 1.292

CDS

ATGGGTGAAAGAGCTAAAAGTCACTTCGGTGATTTTAAGAAGACACATTTCGCCAAACTGCACGAGAGGATACAAAGGAAATATGAAGAGATGCAATGGAAACTGGAGAAATCAAAATCCGTTGACGTACTGTCGACGCTTAAAGATGATTATGCCTTTAAAGAGATCAAATTCGCAAGCACTTTGGATATAACTGCGGAGTCGGACGAAATTTTTGAAGAAGTTCAGAACCATAGTTCCTTGGAAAAGCATACATTGCTAATTAAAGACATGAATAGGAATGACGCTAATCTTGAATATGTTGATTTCAAAGAAGCTAGTATTTCCGAGTCCGAAGGGTTTACTCCTCTTGAAAAGTACGAAAATGGCAGGGAAGATAAATTCTTTGGAGATGACTTTTCTAAAATGAGTCTTGAGTCATTAAATGAAGTAGCTTCAGGGAGCGACGGTGAGCTCACGCCCCCGGCGACTCCCCCGAAGATTTCGATTCGCAATAGAATTGGTTCAAAAATATCCGCTGTCAAGGAAAAACGTTGGCGAGAGGAAAAAGTAAAAAATCCGAACAAGGACAGGAAAAGGGAACATCGTGACAAAGTTGAAAAGTTTATTTTGAGTAATACGACTAAACAGGATTTGAGGAGCTTAAAGAAGACTAAATTGGGTACTGTAACAATTGCACTGATCGACGCTACAGATTTAGAGACTGAAGGCCCCGAAGAAAGAACCCGTATGTTATTTTGTCGATTTAGATTGGGAACTGAGAAACATAAGTCAAAGACAGCAAAAGGGAATACAACTAAATTGAAATGGCAAGAACTATTCAGTTTGAGTATGTACGAAGACCATTTGCTTGAGTTGTCTCTGTGCGATAAAGATTTCTGTATTGGCAGGACTATAATAGATCTGAATAATTTGGATAAAGAGAAGACACATGAAATGCGTCTCAAGATAGAAGGGGAAATATCCGTAGTACAAATTTTTCTATTAATTACAATCAGCGGTATACCGTTACACAATACCATCGCAGATTTAGAAGATTATGAAGCAACAACCAAGGAGCTCGATGTTGTCAAAAAGAAATTTGCATGGTACCATATCGGGAATTCAAACGAAGTTGGCTGGTTATCTGTGTTGGTATACGGAGCTAAAGGATTACATGCTCAGGACACGTGTTGCATATTAGAACTTGATAATGAAAGGTTACAAACACATACAGAAATCAAAACGAATGAACCTAATTGGATGAAATTATTTAGATTCATTGTAAATGATATTACTTCAGTAATAGAAGTGACAGTACATGACGAAAAAAGATCTGAGGATATTGCAAAAATTACAATACCATTATTAAAAATTAACAACGGAGTAAAAAAATGGTATGCTCTGAAACACACAACGCAGAGAGAAAGAGCGAGAGGAACGAACCCTAGAATCCTGTTAGAAATGAAAGTCACATGGAATCTCACAAAAGCATCGCTCCGATCGTTTACACCCAAACAGACAAAATATTTAGAAACGAAAGCCAAATTCGATAGACATATTTTTGCGAGGAATATCTCAAGGGCAAAATATGTCACTGCATGGGTGCTAAATGCTATCCAGATCGTTAAAACATGTTTCGAATGGGAATCAAGAAAATCAAACGCATTAGCCCTCACATTATGGCTATTATTTTGTTGGTTTTTCAAAATGTGGATGTTGCCACTTCTATTATTGATACCATTCATTTGGTATCGTCCACCGAGATACTATTTAGTAAACTGGAAACGTTATTTCAAAGGAATGCCAATTGAAGATGATAATTCCAAGAAAGAGAAGGACGAAAAAAACACATCTTTGAGACAAAAGATACAAAGTTTACAGGAAATGGTACAGACGGTGCAGAATTTCATTGGAACGTTTGCGAGTCTACACGAGAGAGTAAAGAATTTGTTCAACTTTACAGTACCCTTCCTAAGTTTCTTGACCATATTCATGATCATAATTATCGCCTTCGTAATGTTTGTGATTCCTGTGAAATATATCTTCATGGGTTGGGGTGTACACAAATTCACAAGAAAAATTCTTAGGCCGAACAGAATTCCAAATAATGAAATTCTGGATCTGCTCTCCCGAGTACCTGATGATGAAACGTTGCTTGACTGTGAAGAGCTACCTTTGGAGGAACCAGAGGAAGACGTAGTAGAACCATAA

Protein

MGERAKSHFGDFKKTHFAKLHERIQRKYEEMQWKLEKSKSVDVLSTLKDDYAFKEIKFASTLDITAESDEIFEEVQNHSSLEKHTLLIKDMNRNDANLEYVDFKEASISESEGFTPLEKYENGREDKFFGDDFSKMSLESLNEVASGSDGELTPPATPPKISIRNRIGSKISAVKEKRWREEKVKNPNKDRKREHRDKVEKFILSNTTKQDLRSLKKTKLGTVTIALIDATDLETEGPEERTRMLFCRFRLGTEKHKSKTAKGNTTKLKWQELFSLSMYEDHLLELSLCDKDFCIGRTIIDLNNLDKEKTHEMRLKIEGEISVVQIFLLITISGIPLHNTIADLEDYEATTKELDVVKKKFAWYHIGNSNEVGWLSVLVYGAKGLHAQDTCCILELDNERLQTHTEIKTNEPNWMKLFRFIVNDITSVIEVTVHDEKRSEDIAKITIPLLKINNGVKKWYALKHTTQRERARGTNPRILLEMKVTWNLTKASLRSFTPKQTKYLETKAKFDRHIFARNISRAKYVTAWVLNAIQIVKTCFEWESRKSNALALTLWLLFCWFFKMWMLPLLLLIPFIWYRPPRYYLVNWKRYFKGMPIEDDNSKKEKDEKNTSLRQKIQSLQEMVQTVQNFIGTFASLHERVKNLFNFTVPFLSFLTIFMIIIIAFVMFVIPVKYIFMGWGVHKFTRKILRPNRIPNNEILDLLSRVPDDETLLDCEELPLEEPEEDVVEP

Uniprot

A0A2A4JA84   A0A2H1WPT5   A0A3S2M9K5   A0A1E1WBJ9   A0A194R477   A0A212EPY1   + More
A0A194PEP1   A0A0L7LFK5   A0A2H1WBS6   H9JW63   A0A2W1BKK6   A0A2A4K8X0   A0A2A4K984   A0A1B6EUE0   A0A194R7I2   A0A3S2NMQ7   A0A1Y1M3S5   A0A2A3EPA0   A0A067QZE1   V9IEV3   V9IFE7   A0A310S7H1   E0VQX2   A0A158NNP2   A0A1Y1M0D1   A0A0C9RHL5   A0A232FFH3   A0A151I9P9   T1I1Y3   A0A2A4J601   A0A2A4J4U8   A0A1Y1M5V4   D6WUE3   A0A139WFX4   A0A139WFN8   A0A088A9U8   A0A1I8PKP5   A0A0M9A7A8   A0A154NZ39   A0A151X947   A0A212F6Q9   A0A195F6N0   A0A1I8MDU5   U4UKD4   A0A2H1V383   E2AYX5   E9GTE2   N6TJP3   A0A0P5PPJ2   A0A0P6E172   A0A0P5G832   A0A0P5IUY0   A0A0N8C642   A0A0P5EK68   A0A0P5HKE5   A0A0P5HJB2   A0A0P5Q3V5   A0A0P5RTR2   A0A1A9URC3   A0A0N8AJP7   A0A0P5JBY1   A0A0P5HPH7   F4WQE3   A0A0P5I1X2   A0A195B3G7  

Pubmed

26354079    22118469    26227816    19121390    28756777    28004739    + More
24845553    20566863    21347285    28648823    18362917    19820115    25315136    23537049    20798317    21292972    21719571   

EMBL

NWSH01002373    PCG68444.1    ODYU01010161    SOQ55085.1    RSAL01000007    RVE54120.1    + More
GDQN01006737    JAT84317.1    KQ460779    KPJ12324.1    AGBW02013361    OWR43524.1    KQ459606    KPI91742.1    JTDY01001309    KOB74242.1    ODYU01007596    SOQ50513.1    BABH01025337    BABH01025338    KZ150109    PZC73376.1    NWSH01000040    PCG80354.1    PCG80353.1    GECZ01028281    JAS41488.1    KQ460615    KPJ13607.1    RSAL01000237    RVE43708.1    GEZM01043132    JAV79290.1    KZ288212    PBC32861.1    KK852859    KDR14857.1    JR040572    AEY59192.1    JR040571    AEY59191.1    KQ773232    OAD52398.1    DS235442    EEB15778.1    ADTU01021618    ADTU01021619    GEZM01043131    JAV79292.1    GBYB01000914    GBYB01006426    JAG70681.1    JAG76193.1    NNAY01000316    OXU29270.1    KQ978273    KYM95768.1    ACPB03005944    NWSH01002972    PCG67166.1    PCG67167.1    GEZM01043135    JAV79286.1    KQ971352    EFA07297.2    KYB26751.1    KYB26752.1    KQ435732    KOX77403.1    KQ434783    KZC04883.1    KQ982383    KYQ56897.1    AGBW02009983    OWR49417.1    KQ981744    KYN36255.1    KB632339    ERL92928.1    ODYU01000314    SOQ34832.1    GL444028    EFN61345.1    GL732563    EFX77264.1    APGK01034847    APGK01034848    APGK01034849    APGK01034850    KB740923    ENN78073.1    GDIQ01131074    JAL20652.1    GDIQ01073928    JAN20809.1    GDIQ01244941    JAK06784.1    GDIQ01216234    JAK35491.1    GDIQ01111123    JAL40603.1    GDIQ01269085    JAJ82639.1    GDIQ01226131    GDIQ01226129    JAK25596.1    GDIQ01226130    JAK25595.1    GDIQ01119462    JAL32264.1    GDIQ01196991    GDIQ01097322    JAL54404.1    GDIQ01269083    JAJ82641.1    GDIQ01207896    JAK43829.1    GDIQ01224927    GDIQ01224925    JAK26798.1    GL888273    EGI63543.1    GDIQ01224926    JAK26799.1    KQ976641    KYM78739.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    UP000037510    + More
UP000005204    UP000242457    UP000027135    UP000009046    UP000005205    UP000215335    UP000078542    UP000015103    UP000007266    UP000005203    UP000095300    UP000053105    UP000076502    UP000075809    UP000078541    UP000095301    UP000030742    UP000000311    UP000000305    UP000019118    UP000078200    UP000007755    UP000078540   

PRIDE

H9JW63   

Pfam

PF08372   PRT_C        + More
PF00168   C2
PF06398   Pex24p

Interpro

IPR035892   C2_domain_sf        + More
IPR013583   PRibTrfase_C       
IPR000008   C2_dom       
IPR001565   Synaptotagmin       
IPR010482   Peroxin       

Gene 3D

2.60.40.150    

ProteinModelPortal

A0A2A4JA84   A0A2H1WPT5   A0A3S2M9K5   A0A1E1WBJ9   A0A194R477   A0A212EPY1   + More
A0A194PEP1   A0A0L7LFK5   A0A2H1WBS6   H9JW63   A0A2W1BKK6   A0A2A4K8X0   A0A2A4K984   A0A1B6EUE0   A0A194R7I2   A0A3S2NMQ7   A0A1Y1M3S5   A0A2A3EPA0   A0A067QZE1   V9IEV3   V9IFE7   A0A310S7H1   E0VQX2   A0A158NNP2   A0A1Y1M0D1   A0A0C9RHL5   A0A232FFH3   A0A151I9P9   T1I1Y3   A0A2A4J601   A0A2A4J4U8   A0A1Y1M5V4   D6WUE3   A0A139WFX4   A0A139WFN8   A0A088A9U8   A0A1I8PKP5   A0A0M9A7A8   A0A154NZ39   A0A151X947   A0A212F6Q9   A0A195F6N0   A0A1I8MDU5   U4UKD4   A0A2H1V383   E2AYX5   E9GTE2   N6TJP3   A0A0P5PPJ2   A0A0P6E172   A0A0P5G832   A0A0P5IUY0   A0A0N8C642   A0A0P5EK68   A0A0P5HKE5   A0A0P5HJB2   A0A0P5Q3V5   A0A0P5RTR2   A0A1A9URC3   A0A0N8AJP7   A0A0P5JBY1   A0A0P5HPH7   F4WQE3   A0A0P5I1X2   A0A195B3G7  

PDB

2EP6     E-value=1.78546e-15,     Score=204

KEGG

101739480    no KO assigned | (RefSeq) multiple C2 and transmembrane domain-containing protein 1-like

GO

GO:0016021   GO:0030672   GO:0005515   GO:0007155   GO:0031012   GO:0006396   GO:0004713   GO:0043565   GO:0016567   GO:0016020   GO:0005634   GO:0006260  

Length:

730

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

53.24711

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05023

outside

1  -  553

TMhelix

554  -  576

inside

577  -  649

TMhelix

650  -  672

outside

673  -  730

 

 

Pi

3.634786

Theta

4.319301

Tajima's D

-1.853958

CLR

345.012943

CSRT

0.0190990450477476

Interpretation

Possibly Positive selection