SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06852  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012089
Annotation
cytochrome_P450?_family_6?_subfamily_ab?_polypeptide_5_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.999 Mitochondrial   Reliability : 1.414
 

Sequence

CDS
ATGTTTTTTTATCTACTAATTGTGATTTTAATAACATTGTATTACTATGGGGTTAGGACTTTTGATTACTGGAAGAAGAAGGGTGTCAATCATGATCCGCCGCTACCCTTCTTTGGAAATAATTTAAGACAGTTCATGCAAAAAGCCAGTATGGCAATGATGGCCACGGAGACGTACAAGAAATATCCTGAGGAGAAAGTGGTGGGTTTCTATCGAGGTACCTCACCTGAACTCGTGGTACGGGACCCTGAACTCATCAAGAGAATCCTCGTCACAGATTTCAGCAGCTTCTACGCAAGAGGCTTTAATCCACACAAAAAGGTAATAGAACCGTTACTTAAGAATTTGTTTTTTGCTGACGGCGATCTTTGGCGGTTGATAAGACAGAGATTCACTCCGGCTTTCAGTACCGCTAAATTAAAGGCAATGTTTCACATAATAACCGAACGTGCAGAAAAATTACAAATGATTGCGGAAAACGAGGCCTATGAAAATTTTTGCGACGTCAGGGAACTGATGGCCAGGTACACGACCGATTTTATAGGCGCATGTGGCTTTGGCTTAAATATTGACTCTTTGAGTGATGAGAACTCCCAATTCCGAAAACTTGGTAAGAGGATATTCAAAAGAGATCTCAGCGATGCAGTGCGTGCTGCCCTTAAATTAATGTTTCCGGAATTGTGTAAGCATTTAACGTTTCTGACGCCAGAGTTAGAAAAATCTATGACGTATTTAGTACAAAATGTGATACGCGAAAAGAATTACAAGCCCTCCGGAAGAAATGATTTCATAGATCTGATGCTTGAGCTCAAACAGAAGGGAAAATTACTCGGGGAGTCAATAGAAGCCAAGAACGCAAACGGAACACCAAAACAAGTTGAACTAGAATTCGATGACTTGCTGATGACGGCACAGGTCTTCGTTTTCTTCGGAGCTGGTTTCGAGACATCCTCGACCGCCTCGAGCTACACATTGCATCAATTGGCCTTCAATCCAGAGTGCCAAGAGAAAACACAAAAGGAAATCGATGAAGTTTTGAGCAAACACAACAACAAGATTACTTATGATGCTATCAAAGAGATGACATATTTAGAAATGGCATTTAACGAGGCAATGAGACTGTATCCATCAGTTGGATATTTGGTGAGGATGTGCACAGTACCTGAATATACGTTTCCGGAAATCAATTTGACTATCAACGAAGACGTAAAATTAATGATTCCGATTCAAGCTATACAGAAAGATGAAAAGTACTTCAAGGATCCTGAGAGGTTTCATCCTGAAAGGTTTAGCTCTGGCGCGAAAGCAAATTTGAAACCGTACACATTTTTGCCTTTTGGTGAAGGGCCACGGGCATGTGTTGGTGAAAGACTGGGTCAAATGCTGTCGATGGCGGGCTTAGTTGCTGTATTACAGAAATATACGGTAGAGCCCGTTGAGATCAGCCTACGAGACCCAATACCTGATCCTACCACAACCGTTTCTGAAGGCTTCGTCCATGGTCTACCTCTCAAGCTACGGAGAAGAGAACGCAGAATCTAG
Protein
MFFYLLIVILITLYYYGVRTFDYWKKKGVNHDPPLPFFGNNLRQFMQKASMAMMATETYKKYPEEKVVGFYRGTSPELVVRDPELIKRILVTDFSSFYARGFNPHKKVIEPLLKNLFFADGDLWRLIRQRFTPAFSTAKLKAMFHIITERAEKLQMIAENEAYENFCDVRELMARYTTDFIGACGFGLNIDSLSDENSQFRKLGKRIFKRDLSDAVRAALKLMFPELCKHLTFLTPELEKSMTYLVQNVIREKNYKPSGRNDFIDLMLELKQKGKLLGESIEAKNANGTPKQVELEFDDLLMTAQVFVFFGAGFETSSTASSYTLHQLAFNPECQEKTQKEIDEVLSKHNNKITYDAIKEMTYLEMAFNEAMRLYPSVGYLVRMCTVPEYTFPEINLTINEDVKLMIPIQAIQKDEKYFKDPERFHPERFSSGAKANLKPYTFLPFGEGPRACVGERLGQMLSMAGLVAVLQKYTVEPVEISLRDPIPDPTTTVSEGFVHGLPLKLRRRERRI

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01016132    BABH01016133    EF570076    ABQ45551.1    AK289288    AK289289    + More
BAM73815.1    BAM73816.1    FJ795021    ACN88551.1    GU731534    ADE05584.1    KM016733    AID54885.1    NWSH01000968    PCG73362.1    MG829855    AXJ21602.1    JQ901385    AGB93713.1    KQ459606    KPI91745.1    KX443425    ASO98000.1    GDQN01000714    JAT90340.1    JTDY01003692    KOB69138.1    JQ901386    AGB93714.1    GDQN01011046    GDQN01002027    JAT80008.1    JAT89027.1    RSAL01000007    RVE54122.1    KJ645913    AIJ00770.1    ODYU01010161    SOQ55088.1    KF853198    AHH92936.1    KQ460779    KPJ12327.1    AGBW02013361    OWR43525.1    KJ645915    AIJ00772.1    KP715470    AKR18892.1    KJ645916    AIJ00773.1    GCVX01000047    JAI18183.1    GCVX01000066    JAI18164.1    KJ645914    AIJ00771.1    GCVX01000065    JAI18165.1    JX310081    AFP20592.1    KX827419    APL97605.1    KPI91048.1    KX443423    ASO97998.1    DQ993198    ABJ97708.1    AK289286    BAM73813.1    KZ150094    PZC73628.1    LADJ01036943    KPJ21304.1    GCVX01000071    JAI18159.1    KPI91050.1    JF829002    AEL87782.1    AK289287    BAM73814.1    AK343203    BAM73889.1    KQ460205    KPJ17095.1    KQ460473    KPJ14499.1    EF017798    ABK27873.1    PZC73629.1    NWSH01000809    PCG74096.1    KPI91047.1    AB498806    BAI47531.1    KQ460545    KPJ14075.1    EF415299    ABN71370.1    BABH01033060    KM016734    AID54886.1    EF111023    ABL60877.1    KPJ14074.1    JN176570    AET11927.1    ODYU01003027    SOQ41282.1    KPI91049.1    KY212041    ARA91605.1    KC789747    AGO62002.1    KX443424    ASO97999.1    NWSH01003644    PCG65996.1    GDQN01005707    GDQN01002158    JAT85347.1    JAT88896.1    GDQN01005420    JAT85634.1    AY295773    AAP83688.1    EF111024    ABL60878.1    JTDY01008220    KOB64674.1    MH644187    AZP54635.1    KOB64673.1    KPJ21305.1    KX443422    ASO97997.1    KQ459591    KPI97045.1    JX310080    AFP20591.1    MG697223    AVR93642.1    KOB64675.1    GCVX01000070    JAI18160.1    GDQN01009559    JAT81495.1    GDQN01005674    GDQN01003533    JAT85380.1    JAT87521.1    GDQN01011078    GDQN01009598    JAT79976.1    JAT81456.1    ODYU01011431    SOQ57167.1    GDQN01007873    GDQN01001117    JAT83181.1    JAT89937.1    KQ459620    KPJ20541.1    GCVX01000061    JAI18169.1    ODYU01004989    SOQ45412.1    MH138213    AXP17154.1    JTDY01009584    KOB63273.1    PCG74097.1    KF701131    AHW57301.1    RSAL01000032    RVE51553.1    KF701132    AHW57302.1    RSAL01000123    RVE46645.1    GDQN01006843    JAT84211.1    KF701130    AHW57300.1    KZ149941    PZC76905.1    JTDY01005488    KOB66951.1    KF701190    AHW57360.1    KF701134    AHW57304.1    JTDY01007935    KOB64846.1    AGBW02011568    OWR46482.1    GU731535    ADE05585.1    KPI97043.1   
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002402   Cyt_P450_E_grp-II       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6MA7     E-value=3.14485e-56,     Score=554

Ontologies

Topology

Length:
513
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.7088399999999
Exp number, first 60 AAs:
16.65515
Total prob of N-in:
0.85579
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  21
outside
22  -  513
 
 

Population Genetic Test Statistics

Pi
6.582569
Theta
7.275116
Tajima's D
-0.857862
CLR
1.075076
CSRT
0.16119194040298
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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