Gene

KWMTBOMO06838

Annotation

PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]

Location

Bomo_Chr11(-):16666234-16670490      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.302

CDS

ATGGAACACGCCCGACCACCGTCAGAATTGAGTCTGGAAGGCAACTCCGTCAGCCGGGCTGACGCATGGAAGCGTTGGAGGAAACAATTTCATCTATTTTTGAAAGCATCAGGGGTGCATAAAGAAGAAGGCAGTGTGCAAGCCAGCTTGCTCATCAATTTAATTGGAACGGAAGGTTTCGATGTGTACGAGACGTTCAAGTTTTCAAATGACACTGAAAAAGATGACGTAACGGTTTTGTTAAAAAAATTCGACGAATACTTCGGCGTCAAACCGAATGTTACGTTGGCGAGATATAATTTCTACATGAGAAACCAGGAAGGCGGCGAGTCCATAGATCAGTATGTGACGGCTTTGAAGCTGCTGAGCAAAACCTGTGAATTTAAAACCTTAGAAGAGGAATTCATTCGCGATCGGATCGTATGCGGCATAAAAAATACGATAGTTCGCGATCGTTTACTGAGAACGGACGACCTAACGATGGACAAAGCTATTAAAATATGCCAAGTCGACGAGGTATCGGCGGACAGCAGTCGCGTATTGCAGGAGTCGCGCGGAGCGAGTGCGGGGCCGGTGCGCGTGGACGCTGTGGGCGCGCGGGGTGGTGCTGGGCCACGTGCGGCGCGGGGTCGAGCCGGCTATGCGCGAGCAGCTCGCGGCGGCCGCGGCGGTCACCGGCTGCGTGCGGTCCCGGATGGCGCGGGGCGCCCGCCGCCTCTTTCCAGTTCATCTGCGTCCAGTACTTGTCTCAGGTGCGGAGGTCCGTGTGTTAGTTGGGCTGACTGTCCTGCGGTCTCAGTGCAGTGTTATGTGTGTCAAAATTATGGTCATTTTGCAAGAATGTGTCAAGTACATAAAGGTGTAAAAAAGTTATATGATATCGGTGTTCTAGAGGACGAAAATAAATACGAGCCGGAACTGGACGATGACTGGGAGTCGTTTTATATATCTACTTTAATTGATGGTTCCAAAATCGACTCGGTGTCGCAGGATTGGTTTGAGGTCCTCCGAGGAGAATGGGGCTCGGAAAATTTTAAACTAGACTCGGGTGCAGATATCAATGTCTTATCTTTTAAGCGATTTGTGCAGTTAGGCAATAACCCTAATAACATTGTTGTAAATCATAAGGTTAAACTGCAATCTTACAGTGGCGATTTCATTCCTATTAAGGGAATTTGTAACATTAAATGGTGGTATAAAAATGTTCAATATGATCTTAAGTTTGCGATAGCTGATATTGATTGTCAAAGTGTACTGGGACTGCAGGCGTGCTTATTATTAGGGTTAATAAAAAGAATTCACGATATAAATTTCTCTAAAAATAGTGATTTGTTCACTGGGTTAGGTTGTTTACCGGGGGAATATCATATAACGGTAGATAGGGATGTGACGCCGGTGGTGTGCGCTCCGCGGAAAGTACCGTTAAGCCTTCGTGATAACTTGAAGGACGAACTCGATAGGATGACAGAGTTAGGTGTGATTAGGAAGGTGACTCATCCGACACCTTGGGTCAACTCGTTAGTAGTAGTGGCCAAGACAAATGGTAAAATGCGCATATGCCTAGACCCGAGGCCTCTCAATAAGGCGATTCAACGTGCTCATTTTCAACTACCCACCATAAATGAGTTGGCTACCAAATTGAATGGGGCTAAATATTTTTCGGTATTGGACGCCAATTCAGGATTTTGGTCCGTAAAGCTAGATAAGGAGAGCGCCGATTTATGCACATTTATTACGCCGTTTGGGCGATATCAATATCTAAGATTACCGTTCGGACTGAACTGCGCACCGGAGGTATTCCACGCTAAATTAAAACAATTGTTAGAAGGTTTAGACGGTGTTGAGTCGTTTATTGATGATATTATTGTCTGGGGGTCCACTAGGCGAGAACATGATGTAAGACTAAATGCGTTATTTCAAAAAGCGCGAGATATTAATTTAAAGTTTAACAAAGATAAGTGTCGCATTTGTGTCGATGAGGTGACATATTTGGGACATATTTTTAATAAAGACGGAATGAAAGTAGATACGGAAAAAGTGCGGGCTGTAATCAATATGCCGGAACCTACGGATTGTAAAAGTTTAGAAAGGTTCTTGGGTGCAATTAATTATTTATCAAAGTTTATACCTAACTACTCGCAACACATATTTCCATTGACTAGATTATTGAAAAAAGATGTCGAGTGGTGTTGGGAAATAGGTCACAAAAACGCCTTTGATAAATTAAAGAAACTGATATGCGAGGCTCCGGTATTATCGTTGTTTGACGTAGGCAGTGAGGTATTGTTGTCGGTGGACGCGAGCAGCGTCGCACTTGGCGCGGTGCTGATGCAGCGCGGCCGCCCGGTCGAGTACGCGTCGCGCACACTCACCGACACACAACAGAGATACGCTCAGATTGAAAAAGAAATGTTAGCTATTGTCTTTGCTTGTGAAAAATTTCACCAGTACATTTATGGAAAAAGGTATATAGTCATAGAAACTGACCATAAACCTCTTGAAAGTATTTTTAAAAAGCCGCTCAATTCAGTCCCAGCACGCTTGCAGCGTATGATGTTAAAATTACAAGGGTACGATCTGAAAATTACTTATAAACCGGGGAAGTATATGTATATACCCGACACGTTATCACGTGCGCCTCTTCCGGATTTATATGACGATAAAATTAGTAAGGCAGTATTGAACCAATTGAAAATGGTAATTAACAATGTACCGATGTCTCAAAGCAAACTGACATTAGTTAAGAAAGAAACTAGTAAAGATGAGTATTTGAAACGTTTGTTAGTTTACATTAATGAAGGTTGGCCCGTTCATAAATATAATGTTGATAGTGATTTAAAGTATTTTTGGTCCATGAGAGACGAGCTGTACTCTGTTGACGGAGTAATTTTTAAAGATAAACAGCAACAGCATAAAACAATAATAGAAAAACAATTAAAAAGTAAAATGTATTATGACCAACATTGTAAAGCGCAGCCGGAGCTAAGTGTCGGCGATGATGTAATTATGTTAGAACATAATAATGAACGAATGCGCGGCACTGTCGTAGGCAAGGCATCTGCACCGCGTTCATACATTGTAAAAAACAAATTAGGTATATATCGACGTAATCGCCGACATTTAATTAAAAATATGCCTGATGAGAAACCTAATGTTGTGGAAAAGCTGAAGAATGATCGGCGCGGCACAATAGTGATCGTATCAGACGAGTCAAGTGGGGGAGAATATGAGATGAGTGTGGATGAGGATGGTTCAGTGTACGAACCGAGTACTTTGTCATCACCTTCATCACCTCATATTTATCCGCCTACTACTCGTAGTAGAACTAAGCAGAATGCAATTAATAATAATTAA

Protein

MEHARPPSELSLEGNSVSRADAWKRWRKQFHLFLKASGVHKEEGSVQASLLINLIGTEGFDVYETFKFSNDTEKDDVTVLLKKFDEYFGVKPNVTLARYNFYMRNQEGGESIDQYVTALKLLSKTCEFKTLEEEFIRDRIVCGIKNTIVRDRLLRTDDLTMDKAIKICQVDEVSADSSRVLQESRGASAGPVRVDAVGARGGAGPRAARGRAGYARAARGGRGGHRLRAVPDGAGRPPPLSSSSASSTCLRCGGPCVSWADCPAVSVQCYVCQNYGHFARMCQVHKGVKKLYDIGVLEDENKYEPELDDDWESFYISTLIDGSKIDSVSQDWFEVLRGEWGSENFKLDSGADINVLSFKRFVQLGNNPNNIVVNHKVKLQSYSGDFIPIKGICNIKWWYKNVQYDLKFAIADIDCQSVLGLQACLLLGLIKRIHDINFSKNSDLFTGLGCLPGEYHITVDRDVTPVVCAPRKVPLSLRDNLKDELDRMTELGVIRKVTHPTPWVNSLVVVAKTNGKMRICLDPRPLNKAIQRAHFQLPTINELATKLNGAKYFSVLDANSGFWSVKLDKESADLCTFITPFGRYQYLRLPFGLNCAPEVFHAKLKQLLEGLDGVESFIDDIIVWGSTRREHDVRLNALFQKARDINLKFNKDKCRICVDEVTYLGHIFNKDGMKVDTEKVRAVINMPEPTDCKSLERFLGAINYLSKFIPNYSQHIFPLTRLLKKDVEWCWEIGHKNAFDKLKKLICEAPVLSLFDVGSEVLLSVDASSVALGAVLMQRGRPVEYASRTLTDTQQRYAQIEKEMLAIVFACEKFHQYIYGKRYIVIETDHKPLESIFKKPLNSVPARLQRMMLKLQGYDLKITYKPGKYMYIPDTLSRAPLPDLYDDKISKAVLNQLKMVINNVPMSQSKLTLVKKETSKDEYLKRLLVYINEGWPVHKYNVDSDLKYFWSMRDELYSVDGVIFKDKQQQHKTIIEKQLKSKMYYDQHCKAQPELSVGDDVIMLEHNNERMRGTVVGKASAPRSYIVKNKLGIYRRNRRHLIKNMPDEKPNVVEKLKNDRRGTIVIVSDESSGGEYEMSVDEDGSVYEPSTLSSPSSPHIYPPTTRSRTKQNAINNN

Uniprot

A0A3B3HLX7   A0A2G8KFU3   A0A3B1JKR1   A0A3P8S414   A0A2G8KHQ8   A0A023EY30   + More
A0A2S2N8I3   A0A3Q2XZ76   A0A0A9Z4Y4   A0A1Y1L7V1   A0A146LC45   A0A3P9LZF9   A0A3P9K9H2   A0A1A8DQM9   A0A3P9AYU2   A0A3P8R8M6   A0A147BKH7   A0A0P5XDK7   A0A0P5A948   A0A0P6BAV5   A0A0P5V4F7   A0A0P4XRP4   A0A0P5VCW1   A0A0P5DHJ0   A0A267GLM4   A0A1Y1MCJ7   A0A3Q2DE46   I3KYE2   A0A1A8N8J3   A0A147BIE4   A0A1Y1M671   A0A147BJX4   A0A147BN28   W4YP04   A0A075EIL5   A0A146L0H7   A0A1Y1NDC5   A0A3P8RHF8   A0A3P8Q2Q2   J9LYD2   A0A0A9VTL5   A0A3B3IIM2   A0A3P9HMN7   A0A0P4ZSZ7   A0A0P6FGF0   J9JQ26   A0A0P5SUC4   A0A0P6C2C2   A0A1S3DSZ0  

Pubmed

17554307    29023486    25329095    25474469    25401762    28004739    + More
26823975    25186727    29652888    25201971   

EMBL

MRZV01000618    PIK46835.1    MRZV01000576    PIK47528.1    GBBI01004745    JAC13967.1    + More
GGMR01000868    MBY13487.1    GBHO01004090    JAG39514.1    GEZM01066276    JAV68015.1    GDHC01013957    JAQ04672.1    HADZ01002490    HAEA01007842    SBQ36322.1    GEGO01004116    JAR91288.1    GDIP01073678    JAM30037.1    GDIP01203362    JAJ20040.1    GDIP01019161    JAM84554.1    GDIP01199810    GDIP01181260    GDIP01124130    GDIP01104931    GDIP01053137    GDIP01051184    JAL98783.1    GDIP01239061    JAI84340.1    GDIP01102077    JAM01638.1    GDIP01156216    JAJ67186.1    NIVC01000291    PAA86189.1    GEZM01035137    JAV83383.1    AERX01070080    HAEH01000697    SBR65395.1    GEGO01004841    JAR90563.1    GEZM01041944    JAV80090.1    GEGO01004317    JAR91087.1    GEGO01003204    JAR92200.1    AAGJ04126635    KF319019    AIE48224.1    GDHC01017753    JAQ00876.1    GEZM01011167    JAV93617.1    ABLF02041541    GBHO01044535    JAF99068.1    GDIP01210008    JAJ13394.1    GDIQ01057635    JAN37102.1    ABLF02019772    GDIP01140322    JAL63392.1    GDIP01022208    JAM81507.1   

Proteomes

UP000001038    UP000230750    UP000018467    UP000265080    UP000264820    UP000265180    + More
UP000265160    UP000265100    UP000215902    UP000265020    UP000005207    UP000007110    UP000007819    UP000265200    UP000079169   

Pfam

PF17921   Integrase_H2C2        + More
PF17919   RT_RNaseH_2
PF00078   RVT_1
PF00665   rve
PF03732   Retrotrans_gag
PF11838   ERAP1_C

Interpro

IPR036397   RNaseH_sf        + More
IPR041588   Integrase_H2C2       
IPR000477   RT_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR012337   RNaseH-like_sf       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR005162   Retrotrans_gag_dom       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR024571   ERAP1-like_C_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A3B3HLX7   A0A2G8KFU3   A0A3B1JKR1   A0A3P8S414   A0A2G8KHQ8   A0A023EY30   + More
A0A2S2N8I3   A0A3Q2XZ76   A0A0A9Z4Y4   A0A1Y1L7V1   A0A146LC45   A0A3P9LZF9   A0A3P9K9H2   A0A1A8DQM9   A0A3P9AYU2   A0A3P8R8M6   A0A147BKH7   A0A0P5XDK7   A0A0P5A948   A0A0P6BAV5   A0A0P5V4F7   A0A0P4XRP4   A0A0P5VCW1   A0A0P5DHJ0   A0A267GLM4   A0A1Y1MCJ7   A0A3Q2DE46   I3KYE2   A0A1A8N8J3   A0A147BIE4   A0A1Y1M671   A0A147BJX4   A0A147BN28   W4YP04   A0A075EIL5   A0A146L0H7   A0A1Y1NDC5   A0A3P8RHF8   A0A3P8Q2Q2   J9LYD2   A0A0A9VTL5   A0A3B3IIM2   A0A3P9HMN7   A0A0P4ZSZ7   A0A0P6FGF0   J9JQ26   A0A0P5SUC4   A0A0P6C2C2   A0A1S3DSZ0  

PDB

4OL8     E-value=5.70417e-53,     Score=529

KEGG

NA   

GO

GO:0015074   GO:0003676   GO:0004190   GO:0008270   GO:0005634   GO:0030515   GO:0006396   GO:0004713   GO:0043565   GO:0016567   GO:0016020   GO:0006260  

Length:

1117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00111

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00002

outside

1  -  1117

 

 

Pi

2.127899

Theta

2.170402

Tajima's D

-1.701354

CLR

57.027364

CSRT

0.0269986500674966

Interpretation

Uncertain