SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06823  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012100
Annotation
PREDICTED:_protein_ELYS_isoform_X2_[Bombyx_mori]
Location
Bomo_Chr11(-):16076787-16109331      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.979
 

Sequence

CDS
ATGCAAAAACTACAAGATAGCGTTTTTTCTATTATTAAAACAACAAACTTATCTCCAGCTGTGTTCAGCTTCCTACAGCCTAAAGAAGAATTTGAAGATAATACACCATTAGGTGGGATTTTAAAAGATACCAAACATGGCTGGCTTGCGTTGGGACCAAAATTTTGTGTTGTTGATCTTAGAACTGGCCTTAAAGTTGCTGCAAGAACATTTGGGCACAAATCCAAGAACTCTCAAATAAGTGTAAAATGTGTGGTCGAATTGCCTAGACCATTGTCGGAAAACTCTAAACAACTAGTCATCAGCCTACAATGTGACGACATGGGGCTAATATGTTTCTTCCACATAAATGGGTCTCAAATACTGAGATGCATACAAACGGAAGTTGTTATAACGCAATTGAGTGTGTGTGATGCTTTACCTGATGGAGTTCTTTCATGCTTTGATGGAATTATCATGGCAGGCACTAAGAATGGAGCTATAGTTGCTATTGATCTCAACAGAGATAGCTTACGACAGGCTTTAAAAGACACCTCAGAAGGCTATGAACACTTAATCCATGATGAACTCAGACCAGTAAATCTATCTTTCCTTCCCTACAAAGAAATCCACGATATAGATGAACAAAGAGAGCTTGCTTTAGAAAATGATGATCACCTATCTATTTTACTTAATGAAAATTCTCTAATAGATGGTCAATTTATGTTTCGTAATCCTGATGGAACTGTACAAATGAAAGCAAAAAAAGATCACATTAGAGTCACAGTTTTACAGTATTTACCTCAATTGGCCAGTTTAGCTGTTGGATATAATTTTGGTGCATTTCAAATATGGAATATGATGACTTTGGATTTGGAATTTACTTCACAAGTAAAATTAAATATTGATTGTTTGCCTGTTACACATTTCGGATTCCAGGAGCCATGTGATGACCCTAGAGCTTTTTGCTATTTATGGGTAATATATTCAGTCATAGATAAATTTGAAGACGAAGAATTCCCTCTGGCCGTAATGTATTCATTGACTTACCAAGGAAAGCGAATGCTTTCAGACACTAAATGTCTTTACCAGGATTTCTCCAGTGCTGCTATAAGATTCGAACTGAAATTGTGTGGAGAAGAGAACAGTTTGCTTTTGGGAGGCAAATGTGTGTCCTGCCATACATACTCTGTGAATTCAATGTTGGGTGCCGAAGGGGAGGACAGTATGCTAAACATATGCCAACTAGTTTGGGAGTGTTGGGGTGAGAACCCAAATTCATCTTTGCAATACGGAATGCTTTTGTTTGATCTCGACCAATGGTACAAGGATCAAATGCCAGAAACGTACAGTTTAGAAAGTAATGCTTTTATGAGTGTGATCTGGTGCCCGGAGCTGAGCGCCGGCGGTAGCACAATGCTGGACGTGAGGCTGGACCCGCACTCCGTGGCCGTGTACTGCCATGCCACGAGACTGGAGGAGCACTTTTATCCGAATTCTTTACAGTATAATTGCGTGTCGCTGAACACGTCGGAGTCGAGCGTGCTGGGCACGGTGGGCATCCAGCGGCAGCTGCTGAGCGCGCTGGAGGCGGCGGGCCCGGCCGCGCTGCTGCACCCCGCGCCCCGCGCCGCCGCCGCGCGCGCCGCCGGCCTGGCGCCACTGTTCGCGCCGCCCCCCGCGCCCGCGCCCACGCCGGACGAGCAACGTAAGTTCCTGCTGTCGGTGGCGTTAGAAGCTCGCCTGTGCCGGTTCCTGAAGCGGTGCGCCCACGACTGGGCCACTGGCAGCCACGCCGGCGTTGGCTGCACGCTCTCCTTCATGATCGATTGGTGCTGGTCAAGAGCCCTAGAACTGAAAGAGAACGCAAAAGAAATAACTTCACCGCTGTTCACATCATTTTCACTTCCAGACAGGAACTCTGTCAGAAACCTCGAACACTGTGTTCAACAGTTAATGCAGTTGACAAGCCTGCTCGATGCTATCCTCACAAAATGCTGTAATCTCATCGTTCCCGATGCCCTGAGTGAAATCGAGGAGAAGTACAAAGGCATCGGGACGGTGTCGCTGTACTTCCAAGTTGTGCAATGGTTCCTACGCGTCGGCTTGCTGCCGGAGAGGCTGGACGCGTACGAGGCGCTGCCGTACCCGGCCGAGCAGCTGCACGCCATCTACGCCAAGAGACGCCTCAAGCTAAATCGCTTACAAGACAACGCGTCGCACGAGCTCGGCGCGCAGGCGTCCTGCTCGCTGCTGTACATAGATCAACTCATCGAACAAGAGTTTGCTGGGGATAGGATACATCAGATGTGGATGAAGGGCGGCAGCGAGAGTGGCGGCGTGTACCCGCCCCCGTCGCTGTACGCGCTGCTGCGGCTCTACCTGCTGCCCGACATCGCCGACGAGCACAAGCACTCCCTGGTGCTCTACCTGCTGCTCGACTACTGCATGGTGTACGACGACGTGCGGTACGAGGGTGTAATCCGACGCTTGATGCAGTTCCCAACGATGTTCGGTTTGAGCAACACCGCCATCAAAGCCACACAAGCTTTTTGGCACCTGGACCACAGAGATTTTGATTTTGCACTAGATCAACTCCAATGTCTCACTGGCAACACGCTGTCGGAGTGGCAACACCACGTGGTGTTATCCTCGCTGCTGGCGCAGAACAAGACTCAAGCGGCCCTACAGTATCTGCACGTCAGGAAGCCTGCTCCGATACAGATGAAGAATGGCGACTTTAAAATTCACGATCAGGACAAACTCGAGGACTGGCAGTCGTGCTGCAGCCTGTACCTGGCGCGGGGGCTGGTGTTCGAGGCGCTGGACGTGGTGAGGATGTGCGTGCAGAGCGCCACCACCGCCGAACACAAGAAACGAGTCTTGGACTTCTTCTTTAGAGGATGCCATCACACTGGGAATCTAGCGAAGCTGCTGCAAGCTGCGCTACAAGAGTTCGAAGAGGAAGTGTTCATCAAATATCTAGAGAATTGTAATGAATCTCAGACCTCCGATATATTGATCATGTACTATTTACAGCACGCTAGGTACCTAGAGGCGGAACAGTACAACAATAAGCTGAAGCAATCCAAGCCCCGTCCCAGGGACATGTCGACGTCCGTAGAGTCTCTGCAGGACGCCGGCGAGGGGGACGCCCCTCGTGACGTCATCGTCTCCGTGCTGTGCTCGTCCCTGCCGCGGGTCGCCCGCACCGTGGCGCGCGACTTGCAACAACACAACTTCGATACTACTAAAGTTTTCGTCCCGCGTCCGATGTCGGTGTTCGTTCAGGCCGCGTCGCAGAAAAACACATGCACTTACAAGTCATCCTTCATACAGAGCTCGATAGAGAATGCGAGCGAGACGTGGGTGAGCAAGCCGAGGATGCGGCGCGGCATTAAACGGGCCCTGAACGTCGAAGACACGCCCTTCATCTGCACACCCAAACTAATAAAGACACGGAGCGTGTACTCAGATGAAGCAGAGACTCAAGGCACACCACCAAAACGACCGAAATTCGACCCTACTTATTCGCCAAAGACACCGAAATCCAACAAGAAAGTTGAGAAACTCAGCAGCGAGATGGCGAGCTTGCTGGATATACCGGAGATGCCCAGTCCTGATTACAAGCCCTACAGCAGACTGGACGCCGGAACTCCACACAGCATACTAAAGATGCGCAGAAACGACGTGACCGACGCGCCGTCGCCGGTCGACTCCCGGTACTTGGGCGAGAGCGAAGACGAAGCTCTGGAGACCGCCAGCAACCACACGCACTGCAGCGACTCCGCCAACAAATACCTTCGTTTCGCAATGCCGTCAGAATCGGCCTGGGTTTCACCGCCGATTTCAGAAGATATACCGACAACGAATGAGAAAGAACGATCGTCTGTGATAAGAGAAATAGAGATGGATGTATCGAACGACAGTTACGTCACCAGCGCCTCTCGGCCTACGATTGAAACATATCAACCTGCATCCAGTATAAATATATCAACTAAGAAAGATGCTGTCAAATCTGTGAAATCATATAAAGACAATGTAAAGGCTAGACGATCCCTTTCGATATCAGTCAACAGCAGTCTATCAGACGATCCCAACACGTCCATAGAAAGCATCGCCGACATACCGATAACGCTTATCAACCCTCGATACACTGGAGAGAGGCGACAGTCGCGTCGAGCCTCCACGGAAGCAAACGAGCAAGGAAACATCGATGATGTACGTGCCAAGGAAATGGAGGCGCTTCGGCGTAGAGCCCGCGCTGACGAACACGCGGAGTGGGAGCGGGACGTGCGTGCGAAAGAGACGGGTGTATCGATACCTGCCACGCCCAGAGGGAGGCGGGGCATCCGATCCGTTAGTGACGGAAGCACTCCTAAGTCTAATGCAAGCAGATCCAGGACTCCGGAGCTCAGCCCGCGAACATCTCCACTGGCCCCCATACCGGAACAGCCTAAGCAAGAAATCGAAAGCGATCCGCATCCGGAGCGAACTACCCTCAGTGTACCTAGAAATAGGAGCAGATCGAAAACTCCCGATAAAATCGAGAGGACAATCAGAGATTCGCCAAAACTGGAACCGATCAGAGAGTCGCCGATCAAATCGTCTAACACCGAGTCGTCTACGTTCTCGCCAAGGACACGCAGTCTCAGGAGCCGGTCTCGTACGCCCGAAGTTGAATCGCTGCCCGAACAAAACCCAGCGGAAGTCACTCCCAACAGACCCCTTAGGAGCGTCGTTCATTCTAAGACACCAGAAAAGATGTCACCGAGAACGAGTTTGCTGTCTCGAAAGAAGCCGCTGTCGAGAATGGTATTAGAGGCGAACACGTTTAAAACTCAACAAACTGAACAGACCGAAGACCAAGAACCAGCGAGCGCCATCGAATGCACTCCGATGAAATCCAATAAAAAAGTATCAAACCTAATGGACGTCACACTGTCTCCTATTGTAAACAAATCGATACTGCACAGCTCGAACGATAGCGTCTCCGAGCTACACAAAGAAGACACGGACAAAACCGATATAGGCATGAAGACCTTGCCTGCCTTCACTACGATACACGAAGTCTGCGCGAAATCTGTGCTGTGCAGCTACGAGAGCAGCACTATGGAGACGTCAGAGCTCATAGAAATCAAACAGACAGTCGAAAATATCGATAGAAGTATCGATAACTTGAAATCCTTGCCGGCTTTCACAACACTCAACAATACTGAAGTAGGCAGGTCTGTGCTACAGAGCTTCGAGAGCAGCGTCGAAGCGTCAAGCGCGAACGAATCGAAAGATCAACCGAATACGTTCTCGGCTTTCTCGAAAATGATCGAGAGCGACTTCGAGAGATCCGTTTTGCACAGCTTCCGTAGCAGCGTCGATGACAAGAGGGAAGCTTCCAGTCTGATCACCAACGATAGCGATGTCGATAAAGCCGATGAGGTGAGAAACGATGCCATACAGACAGAGAAAGAAAAAATTGTCGAGATTGAGAGAGAGATACATGAGATCGAAGGAGACATGTCCGGTGATGATAGCGAAAGTGATGAAGAGATTATTGAGGCGGAGGAGGCCGAAGGAGAAGACGACAGCTCCGAAAGTAGCTCGTCTAGTTCGACAAGTAGCGAGGACGAAGCAGACGTCATCTCAATCCAAGACACGGATTCTGAAGATTCTAATCGAAAAGTTGATGAACAGCAGAAACAAGAAACCGAAAATGTTCAAGTACAAGCCGGAACTGTTGAAGAGACTTCGAGCAACAACGCGGGTCCGCCGGCCCAGCTCTCCCTCCTCACGGACGACGCTTCCGGAGTAGAATCCGATCGTTCAGACATTCAATTGAATTATTCCGATGAAAAAGTAACTGAGGACAAAGACACAGTCGACGAAGGAGCCAATAAAGTTTCAGAACCTCAAGCGCCTATACAAGTGCACGTTGTAGTGGAGAAAGTAGCTTCAGCCGAGGATCTTATGGGATCGAAAGAAATTGAATCAGAAAATGTGGCGCTAAACGAAATTCTCCCTAAAACCGATGACAACAAGGATGAAAATGCTAAAACCGAAACGAAAGATAGCGGAACTAACAAACAAGTCGATTCCGAACTAAAAGATAATGCCCCCGACATCGTAGTATCCGAAGATAAAGAACTAGAAAAAACGGACACGGCAACTGAAGAAACAGTTAAAGGGAGACGCACAAGAAAACGCGCCACCTCCACCGCCTCCAATCAGTCTATGGACGAACCCAAAACCCCCGCAACCAGAAAACGAATCAATTCAAATGCTTCCCTCGCGGAGGAACTGACCACGCCCGAGACTGCTGACGTCACGCCGTCCAGTAGAAGAGCCAAGACCCCGACGAGCGCGGAAGTCAGACGCATAGTCACTCGACGAATTTCCAAAGAAATGGGGGAGAAATTAGAAGAAAGATCTTTAGAGGAACTGACGCCGAAGAGACGTGCCACACGATCAAGAAGCAAAAATATCGATGACAACGAAAGCGTCGCCTCGGAAAGCTCCTTTGTGTCCAACAAGAGCAAGGCCAGCGAGGACCTGGACAAGGCTGGGCAGGGTAGAAGAACTAGGAAGTCCGTAGTCGCCACGAAACCGGAGCTGTCTGTCATACCCGAAGCCGCCGTCGAGGAGAGCAAGGAGGGCAGCGCCATCATCGATGAACTATCCAAGTCTAGAAGGATGACCCGGGGCCAGCAAACAGCCCTGTCGACGCTACTGGAGAAGCGGCCCGCCCCCAGAACCAAGCGCAGAAGCAGCGCCGCCGCCTCCTCCAGCGACGACGAGCCGCCCTCCGCCTTCGACGTGCAACCCATGGACCGGATCTCGCTCCTAAACAAAACCGACTACGAAGGGATCCCGGACGATGCAGAGTTGCAATCCGATATATCTCCTACCTCTGTAGCGTCGGAGGCAGCTAAATTTCGCAGAAAAAACATGACACGAGCCGCATCCGAGTCGAAGTTGATGCCAAAACCGGCCAAAATAGGCAGACGGATATCCGTTGACATTGATAATAACTCAGAGTTGGGATCCCCGGTGGCGTCAGTCAGCGGCAGTCCGGCCCGGGGACGTCGGGCTTCGTTTGCCCGGGCCTGCGAAGCTCTCCTCACTCCCAAGGGCAGACGGGCATCCACCGACGTTAAGAAAGGAGACGAAAGTCCTGAAGCGTCTCCAGCTCCTTCAGAAGGCGAGGCAGTATCAGCGAGCCGGCGGCCGCGACGAGCCTCCACGCACTCCAACACCAGCGCCACTAAAACTGAAACTAGCAAAAGATCAAAAAGACAACAAAATTAG
Protein
MQKLQDSVFSIIKTTNLSPAVFSFLQPKEEFEDNTPLGGILKDTKHGWLALGPKFCVVDLRTGLKVAARTFGHKSKNSQISVKCVVELPRPLSENSKQLVISLQCDDMGLICFFHINGSQILRCIQTEVVITQLSVCDALPDGVLSCFDGIIMAGTKNGAIVAIDLNRDSLRQALKDTSEGYEHLIHDELRPVNLSFLPYKEIHDIDEQRELALENDDHLSILLNENSLIDGQFMFRNPDGTVQMKAKKDHIRVTVLQYLPQLASLAVGYNFGAFQIWNMMTLDLEFTSQVKLNIDCLPVTHFGFQEPCDDPRAFCYLWVIYSVIDKFEDEEFPLAVMYSLTYQGKRMLSDTKCLYQDFSSAAIRFELKLCGEENSLLLGGKCVSCHTYSVNSMLGAEGEDSMLNICQLVWECWGENPNSSLQYGMLLFDLDQWYKDQMPETYSLESNAFMSVIWCPELSAGGSTMLDVRLDPHSVAVYCHATRLEEHFYPNSLQYNCVSLNTSESSVLGTVGIQRQLLSALEAAGPAALLHPAPRAAAARAAGLAPLFAPPPAPAPTPDEQRKFLLSVALEARLCRFLKRCAHDWATGSHAGVGCTLSFMIDWCWSRALELKENAKEITSPLFTSFSLPDRNSVRNLEHCVQQLMQLTSLLDAILTKCCNLIVPDALSEIEEKYKGIGTVSLYFQVVQWFLRVGLLPERLDAYEALPYPAEQLHAIYAKRRLKLNRLQDNASHELGAQASCSLLYIDQLIEQEFAGDRIHQMWMKGGSESGGVYPPPSLYALLRLYLLPDIADEHKHSLVLYLLLDYCMVYDDVRYEGVIRRLMQFPTMFGLSNTAIKATQAFWHLDHRDFDFALDQLQCLTGNTLSEWQHHVVLSSLLAQNKTQAALQYLHVRKPAPIQMKNGDFKIHDQDKLEDWQSCCSLYLARGLVFEALDVVRMCVQSATTAEHKKRVLDFFFRGCHHTGNLAKLLQAALQEFEEEVFIKYLENCNESQTSDILIMYYLQHARYLEAEQYNNKLKQSKPRPRDMSTSVESLQDAGEGDAPRDVIVSVLCSSLPRVARTVARDLQQHNFDTTKVFVPRPMSVFVQAASQKNTCTYKSSFIQSSIENASETWVSKPRMRRGIKRALNVEDTPFICTPKLIKTRSVYSDEAETQGTPPKRPKFDPTYSPKTPKSNKKVEKLSSEMASLLDIPEMPSPDYKPYSRLDAGTPHSILKMRRNDVTDAPSPVDSRYLGESEDEALETASNHTHCSDSANKYLRFAMPSESAWVSPPISEDIPTTNEKERSSVIREIEMDVSNDSYVTSASRPTIETYQPASSINISTKKDAVKSVKSYKDNVKARRSLSISVNSSLSDDPNTSIESIADIPITLINPRYTGERRQSRRASTEANEQGNIDDVRAKEMEALRRRARADEHAEWERDVRAKETGVSIPATPRGRRGIRSVSDGSTPKSNASRSRTPELSPRTSPLAPIPEQPKQEIESDPHPERTTLSVPRNRSRSKTPDKIERTIRDSPKLEPIRESPIKSSNTESSTFSPRTRSLRSRSRTPEVESLPEQNPAEVTPNRPLRSVVHSKTPEKMSPRTSLLSRKKPLSRMVLEANTFKTQQTEQTEDQEPASAIECTPMKSNKKVSNLMDVTLSPIVNKSILHSSNDSVSELHKEDTDKTDIGMKTLPAFTTIHEVCAKSVLCSYESSTMETSELIEIKQTVENIDRSIDNLKSLPAFTTLNNTEVGRSVLQSFESSVEASSANESKDQPNTFSAFSKMIESDFERSVLHSFRSSVDDKREASSLITNDSDVDKADEVRNDAIQTEKEKIVEIEREIHEIEGDMSGDDSESDEEIIEAEEAEGEDDSSESSSSSSTSSEDEADVISIQDTDSEDSNRKVDEQQKQETENVQVQAGTVEETSSNNAGPPAQLSLLTDDASGVESDRSDIQLNYSDEKVTEDKDTVDEGANKVSEPQAPIQVHVVVEKVASAEDLMGSKEIESENVALNEILPKTDDNKDENAKTETKDSGTNKQVDSELKDNAPDIVVSEDKELEKTDTATEETVKGRRTRKRATSTASNQSMDEPKTPATRKRINSNASLAEELTTPETADVTPSSRRAKTPTSAEVRRIVTRRISKEMGEKLEERSLEELTPKRRATRSRSKNIDDNESVASESSFVSNKSKASEDLDKAGQGRRTRKSVVATKPELSVIPEAAVEESKEGSAIIDELSKSRRMTRGQQTALSTLLEKRPAPRTKRRSSAAASSSDDEPPSAFDVQPMDRISLLNKTDYEGIPDDAELQSDISPTSVASEAAKFRRKNMTRAASESKLMPKPAKIGRRISVDIDNNSELGSPVASVSGSPARGRRASFARACEALLTPKGRRASTDVKKGDESPEASPAPSEGEAVSASRRPRRASTHSNTSATKTETSKRSKRQQN

Summary

Uniprot
H9JRE0   A0A3S2LNP7   A0A194PGD3  
Pubmed
19121390    26354079   
EMBL
BABH01016266    BABH01016267    RSAL01000045    RVE50619.1    KQ459606    KPI91764.1    + More
Proteomes
UP000005204    UP000283053    UP000053268   
PRIDE
H9JRE0   
Pfam
PF16687   ELYS-bb        + More
PF13934   ELYS
Interpro
IPR032040   ELYS-bb        + More
IPR025151   ELYS_dom       
IPR036322   WD40_repeat_dom_sf       
SUPFAM
SSF50978   SSF50978       
ProteinModelPortal
H9JRE0   A0A3S2LNP7   A0A194PGD3  
PDB
4I0O     E-value=1.48742e-14,     Score=201

Ontologies

KEGG
101741033    no KO assigned | (RefSeq) protein ELYS
GO

Topology

Length:
2426
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.61287
Exp number, first 60 AAs:
0.0486
Total prob of N-in:
0.07084
outside
1  -  2426
 
 

Population Genetic Test Statistics

Pi
21.295772
Theta
19.583287
Tajima's D
-1.947713
CLR
16.593679
CSRT
0.0166491675416229
Interpretation
Possibly Positive selection
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