SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06821
Pre Gene Modal
BGIBMGA012052
Annotation
PREDICTED:_zinc_finger_protein_883-like_isoform_X3_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.595
 

Sequence

CDS
ATGCCTGATGGCCTGTTATCTGCACACCGAACGGCTATAGGTAAAAATGACACAACGGTGAGGAGACGCTACATTAACAAAGAAAAATATAACAATAACTTAGGCAAAGATATATCTGATAAAGAACCATCTTCAGATGATTATACTGACACAGAGATAAAGAGAATAGAGGAGAAAATAAAGTCTGGGAAAGACAATATTGTCATGAGAAGACCGAGTGATGTAAAGCTACTTACTACACAAGAAAGAGTTCAGTGCTTACTTCAACATGGTCATCTGTTTAAGGGAAAATTTCCTGTGAGACCGCCAGGAAAATATGTCCCCAGTAAAAAGAGATTGGCTGCTATGGCTGCTAAAATAAGACCCCCTGAGAAGGACAGATTGATATCTAGAAGTGGCCGAATAAAAAAGAAAAACAAACCTGATTTGCAACTCTTAGACAACATATTGAAGAGCGAGTTATTAATTGATGACAGTGCAGAAAGACAAACGAGACATACTGGAGAAAAACCATTTCCTTGTGCTGTGTGTCCATTATCTTTCTCTCAACTGCCTCACATGAAGGCACACATGCGCAAAATTCATGGTAAAGAAAATCCTTACAAGTGTCCCAAATGTGATCAGTTTTTCAAGTTGAAGGTACAGCTTGAGAATCATGCAAAGCTATGTAAGGCTAAAAATTTGTCACAAGAAGAAAGAATCCCAGCTTCATCTCGTACAGAGGAGATTGAAGTTGAGTCTGTAATGAGCCTGTCCCGAATGAGGTTCCTGCTCGCTCTGCTCTTCTCTATGATCTTATCCAAAGAAAGACTCAAGTTTTTAGGTTTCAACAAGCGTCTGATTGACGATCTTCTAGTGGATTCCCTTGAAGCAATGGGGCACGCTTCATGTGTTGATGAAAATCAATCTCCATTAAGTCGTCTAAAAACTAATATTGAGCTGCTCTTAAAACACACTGTACCAAAAGAACAGATAGAAAAATTCCAGAGGGAAAATAAAACCCTGGAAGAGCTCTTAGAAATTCTTACTGATGATAAAAAGAAGAAAGATTAA
Protein
MPDGLLSAHRTAIGKNDTTVRRRYINKEKYNNNLGKDISDKEPSSDDYTDTEIKRIEEKIKSGKDNIVMRRPSDVKLLTTQERVQCLLQHGHLFKGKFPVRPPGKYVPSKKRLAAMAAKIRPPEKDRLISRSGRIKKKNKPDLQLLDNILKSELLIDDSAERQTRHTGEKPFPCAVCPLSFSQLPHMKAHMRKIHGKENPYKCPKCDQFFKLKVQLENHAKLCKAKNLSQEERIPASSRTEEIEVESVMSLSRMRFLLALLFSMILSKERLKFLGFNKRLIDDLLVDSLEAMGHASCVDENQSPLSRLKTNIELLLKHTVPKEQIEKFQRENKTLEELLEILTDDKKKKD

Summary

Uniprot
ProteinModelPortal
PDB
2I13     E-value=5.03169e-09,     Score=145

Ontologies

Topology

Length:
350
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05533
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00705
outside
1  -  350
 
 

Population Genetic Test Statistics

Pi
16.335292
Theta
16.544919
Tajima's D
-0.7109
CLR
0.951966
CSRT
0.191040447977601
Interpretation
Uncertain
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