SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06815
Pre Gene Modal
BGIBMGA012103
Annotation
PREDICTED:_uncharacterized_protein_LOC101747195_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.93
 

Sequence

CDS
ATGGACGATTGGCATCCAGACTTTAGGAAAGCTGTACAATACCCTCAGAACAACTGTTGGATAGAGAGGGAAGTGTCCGCGCATCCCAGTATATGGTCGCCGACGTTCGTTTCGTATTTGAATAGTACGAGACCTTGGCAGAAACCAGCGAAGGCTGAGCCCTTGTTCGCTATACAGACTACAGCCAGGAGAAAAATAGTCAATCTTGTTAGTAAGCACGTGCCGGAGACACAGGATGAAAGCTTGTCAATTCAAGCATTGAGTTCCATGTACTGCGTAGAGCCAACAACCAAGAGACAAAAGACGGACGACGATATTGAAATCATCACAAGCGTCGCCAATGAACATGACGCGCCGTCGGACATTGAGAATAAAGATAAATCACCGATACTAGAAAACAGGGAGAGGTCGTACAAGAAATGCTTAAGAAACAATAACGTATTGAGGAAGTTTAGTAGATTTCCGAGGACTGTGTTGGACGAAAACGTCGTTGAGAGCAGATTCTTCACGGCCAACGCGAAGGTTGAGGACAATGGTGATGACAGAACCGGATCTACGCGAAATCCTTTTAAAATACGTTCGCCCGAAGCGAACAAGGTGACGGTGCGATCGGATAACCAGTTAATAAGTGACCGGATTCCGAGTCCAATATTGGATCCAGTCTCGCTTAAACTTGAAACGTTGGCCGATTCGCCGCCAACGTTGGAGGTAAACACGGAAGACTCCGTCATAGAGAACACTTATCCATACGAGACGTTGGTCACTCCAGTTGATAGTCAGGAATCGTTCGGTGAGTCGGCATCAGTAGTTTCATCTCAAGACAGCGGCGTAGTCCTGGATGTAACCAGAACGAACCGGCCGACCGGTACCAAGAGGCCCGGATGCAGAGTACCCGGATTAAAGAAAGCGACATCCGTGCCGAACAACCAGCCTACGCTACTGAGTAAATTTGGATTTCAGAAAAAAGTCGCTTTGAAGAGATGA
Protein
MDDWHPDFRKAVQYPQNNCWIEREVSAHPSIWSPTFVSYLNSTRPWQKPAKAEPLFAIQTTARRKIVNLVSKHVPETQDESLSIQALSSMYCVEPTTKRQKTDDDIEIITSVANEHDAPSDIENKDKSPILENRERSYKKCLRNNNVLRKFSRFPRTVLDENVVESRFFTANAKVEDNGDDRTGSTRNPFKIRSPEANKVTVRSDNQLISDRIPSPILDPVSLKLETLADSPPTLEVNTEDSVIENTYPYETLVTPVDSQESFGESASVVSSQDSGVVLDVTRTNRPTGTKRPGCRVPGLKKATSVPNNQPTLLSKFGFQKKVALKR

Summary

Pfam
PF00867   XPG_I        + More
PF00752   XPG_N
Interpro
IPR008918   HhH2        + More
IPR006085   XPG_DNA_repair_N       
IPR019974   XPG_CS       
IPR006084   XPG/Rad2       
IPR032641   Exo1       
IPR036279   5-3_exonuclease_C_sf       
IPR006086   XPG-I_dom       
IPR029060   PIN-like_dom_sf       
IPR037315   EXO1_H3TH       
SUPFAM
SSF88723   SSF88723        + More
SSF47807   SSF47807       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
327
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00102
Exp number, first 60 AAs:
0.00102
Total prob of N-in:
0.04492
outside
1  -  327
 
 

Population Genetic Test Statistics

Pi
24.880177
Theta
25.922092
Tajima's D
-0.503321
CLR
0.862731
CSRT
0.23998800059997
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号