SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06806
Pre Gene Modal
BGIBMGA012047
Annotation
PREDICTED:_protein_FAM195A-like_[Plutella_xylostella]
Full name
MAPK regulated corepressor interacting protein 2      
Alternative Name
Protein FAM195A
Location in the cell
Nuclear   Reliability : 1.861
 

Sequence

CDS
ATGAGCACTGGAATTATTTTTCACAGATCAAGTTATCATGATGATCTCATCAATTACATTTATGATTCGTGGAATAAGGTGACCCGTGATCTAGAACGTGGCGATGATGAGGCGAAGTACTACCATGACGTGATGACACCTCGTCACCTTGCCAACTTCAGGCCATTCAATCTTGATGAGTGGTGGGCGCGTCAGACCCACAATCGCAACAAGCATCGGTCTTAG
Protein
MSTGIIFHRSSYHDDLINYIYDSWNKVTRDLERGDDEAKYYHDVMTPRHLANFRPFNLDEWWARQTHNRNKHRS

Summary

Subunit
Interacts with DDX6. Interacts with MCRIP1.
Similarity
Belongs to the MCRIP family.
Keywords
Acetylation   Complete proteome   Cytoplasm   Methylation   Nucleus   Phosphoprotein   Reference proteome  
Feature
chain  MAPK regulated corepressor interacting protein 2
EMBL
KQ460779    KPJ12359.1    RSAL01000045    RVE50610.1    AK404983    BAM20418.1    + More
AK403977    KQ459252    BAM20072.1    KPJ02107.1    NWSH01000397    PCG76692.1    ODYU01005732    SOQ46872.1    GDQN01005398    GDQN01003634    JAT85656.1    JAT87420.1    GAIX01007158    JAA85402.1    AGBW02012669    OWR44618.1    LJIG01016369    KRT80809.1    GALX01006382    JAB62084.1    ADTU01006069    DS235151    EEB12580.1    KQ435152    KZC14912.1    KQ976641    KYM78813.1    GFDL01011631    JAV23414.1    GFDL01012335    JAV22710.1    KQ971321    EFA00594.1    GL441439    EFN64867.1    GL888063    EGI68452.1    KQ976749    KYN08769.1    KQ981272    KYN43862.1    KQ980765    KYN13359.1    KQ982691    KYQ52208.1    KK852815    KDR15824.1    GAPW01005873    JAC07725.1    JXUM01070453    KQ562607    KXJ75495.1    DS232058    EDS33446.1    KQ761906    OAD56451.1    JR047686    AEY60482.1    CH477899    EAT35235.1    GL449799    EFN81952.1    QOIP01000001    RLU26873.1    GEBQ01005718    JAT34259.1    KK107242    EZA54547.1    CP026261    AWP18931.1    KQ435841    KOX71306.1    GFDF01008874    JAV05210.1    GBHO01011344    GBRD01009795    GDHC01013976    JAG32260.1    JAG56029.1    JAQ04653.1    AXCM01001333    PYGN01000017    PSN57643.1    GECU01022827    JAS84879.1    GECZ01017592    JAS52177.1    ABLF02016982    ABLF02016983    ABLF02016984    ABLF02016986    AK340131    BAH70791.1    LZPO01008003    OBS82696.1    GFXV01006884    MBW18689.1    GGMS01009005    MBY78208.1    DS497665    EFA12137.1    KK852999    KDR12662.1    ATLV01021228    KE525315    KFB46137.1    GGMR01020268    MBY32887.1    GL732583    EFX74472.1    AAAB01008984    GEZM01042484    JAV79827.1    AGCU01024909    AGCU01024910    AANG04000434    GANO01003918    JAB55953.1    GDIQ01219573    GDIP01128012    LRGB01000024    JAK32152.1    JAL75702.1    KZS21553.1    CH933807    EDW12282.1    ABGA01033509    ABGA01033510    ABGA01033511    AK003564    AK020614    BC024332    GFTR01002423    JAW14003.1    GECL01001156    JAP04968.1    GBBI01000841    JAC17871.1    GBGD01003383    JAC85506.1    HACG01026713    CEK73578.1    KQ981560    KYN39980.1    AEFK01080146    AEFK01080147    NDHI03003828    PNJ02356.1    GDKW01000551    JAI56044.1    ACPB03028992    GAHY01000871    JAA76639.1    HACG01026712    CEK73577.1    AGTP01030746    KQ980800    KYN12822.1    GEDC01020897    GEDC01018294    JAS16401.1    JAS19004.1    KQ976599    KYM79502.1    KQ982130    KYQ59826.1    IAAA01005613    LAA02741.1   
Pfam
PF14799   FAM195        + More
PF04564   U-box
PF18391   CHIP_TPR_N
Interpro
IPR029428   MCRIP        + More
IPR041312   CHIP_TPR_N       
IPR013026   TPR-contain_dom       
IPR013083   Znf_RING/FYVE/PHD       
IPR003613   Ubox_domain       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
SUPFAM
SSF48452   SSF48452       
Gene 3D

Ontologies

Topology

Subcellular location
Cytoplasm   Upon cellular stress, relocalizes to stress granules.   With evidence from 3 publications.
Stress granule   Upon cellular stress, relocalizes to stress granules.   With evidence from 3 publications.
Nucleus   Upon cellular stress, relocalizes to stress granules.   With evidence from 3 publications.
Length:
74
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.35898
outside
1  -  74
 
 

Population Genetic Test Statistics

Pi
25.7402
Theta
22.160983
Tajima's D
0.59356
CLR
0.943891
CSRT
0.546972651367432
Interpretation
Uncertain
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