SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06793
Pre Gene Modal
BGIBMGA012112
Annotation
neuropeptide_receptor_A7_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.983
 

Sequence

CDS
ATGAACGAAACAATTGTAAATTATACCGATTTGAACATCAGCAATATATCGGAAAAAATTACAAATGCGACAGCGAACGGTCTTCCTCCTTTTCAAGCGAACAGCCACGAAAATATAATCGATAACAAATGGGTGCAAGCTATGTTCTGCGTTATTTACACCATCATATTCGTTTTAGGTCTTCTTGGAAATATATTAGTATGTTTTGTTGTCATCAGAAACAAGGCGATGCAGACAGTTACGAATCTTTTCATTAGCAATTTGGCTTTATCCGACATTTTGTTATGTATATTCGCGATTCCCTTTACTCCCCTTTACACGTTCCGAGGCACTTGGAGTTGGGGCTCTTTGTTATGTCACATTATGCCTTTCGCACAGGGATGCAGTGTATACATATCCACGTTGACGCTTATGTCGATAGCAATCGATAGATTCTTCGTCATTATATACCCTTTTAGGCCACGTATGAAAATCGAGACTTGCATTACGGTAATTATTATGATATGGACTTTCTCCATTACCGTTACGACGCCCTACGCTATTTTTATGACCTACTACGACTTCAAGTTCGGAAAATTTTGTGAGGAAACCTGGCCGTCGGAGAGACTGCGGCGCATATTTGGCTCGGTCACATCCGTTATGCAATTCGTTCTACCGTTCATTGTGATAGCGGTCTGTTATATTTGCGTCAGCTTCAAATTGAACGATAGGGCTAAAGCGAAGGCTGCTAGTAAAAATTCGAAGAAAGAGGAACTCGATAAAAACAGGAAACGGAGAACGAACCAAATGCTGATCGCCATGGTAACGATTTTCGGGCTCTCGTGGCTACCTTTGAACATAATCAACTTATGTAACGATTATTACATGTACGCGATACATCTGAAGTATTACTTTTTGATTTTTTTCGTCGCACATGTAATAGCCATGTCGTCGACCTGCTACAATCCTTTTATATACGCGTGGATGAACGAGAATTTTCGTAAGGAATTCAAGCAATTGATTCCGTGTATCGATTCTTCGGCGCAGACGAGAGGAAACATTCAGATGGAACAGCTCAGGGCTGGTCCCGAAAAGACTTTTAACGGTAACACGACGACTGACAGCTATTTAGGATCCAGCTCGCAAAGGGCGACATCGTTCAGACACAAAAGAAAGCCGAGTGCCGCGGCGGACGTAGAGAAAAGTGGCGTCGAACTGAATGAAGATTTATTGACAGTTGACGTGAAGCATTGTCACATTTCAACGAGCTACAATCTAAGGAGGGAATCAGTTAAATTGCGTCTCATCAACGAGGAGTCGTTCGACGGGACGCCGTCTCAAAGTCAATTCTAA
Protein
MNETIVNYTDLNISNISEKITNATANGLPPFQANSHENIIDNKWVQAMFCVIYTIIFVLGLLGNILVCFVVIRNKAMQTVTNLFISNLALSDILLCIFAIPFTPLYTFRGTWSWGSLLCHIMPFAQGCSVYISTLTLMSIAIDRFFVIIYPFRPRMKIETCITVIIMIWTFSITVTTPYAIFMTYYDFKFGKFCEETWPSERLRRIFGSVTSVMQFVLPFIVIAVCYICVSFKLNDRAKAKAASKNSKKEELDKNRKRRTNQMLIAMVTIFGLSWLPLNIINLCNDYYMYAIHLKYYFLIFFVAHVIAMSSTCYNPFIYAWMNENFRKEFKQLIPCIDSSAQTRGNIQMEQLRAGPEKTFNGNTTTDSYLGSSSQRATSFRHKRKPSAAADVEKSGVELNEDLLTVDVKHCHISTSYNLRRESVKLRLINEESFDGTPSQSQF

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01016315    AB330428    BAG68406.1    NWSH01000397    PCG76689.1    ODYU01009710    + More
SOQ54331.1    KT031005    ALM88303.1    KQ459252    KPJ02118.1    JTDY01004332    KOB68286.1    KQ461185    KPJ07497.1    AGBW02010223    OWR48893.1    KPJ02117.1    KPJ07498.1    ODYU01006678    SOQ48738.1    JTDY01004673    KOB67886.1    NWSH01000283    PCG77773.1    AB330432    BAG68410.1    BABH01016327    KT224452    ALP48446.1    KT031008    ALM88306.1    NWSH01002352    PCG68470.1    KT031009    ALM88307.1    ODYU01007985    SOQ51227.1    AB330431    BAG68409.1    BABH01016333    GDQN01002554    JAT88500.1    JTDY01002496    KOB71291.1    UFQS01001340    UFQS01001735    UFQT01001340    UFQT01001735    SSX10421.1    SSX12089.1    SSX30107.1    AXCM01000343    ATLV01023928    KE525347    KFB49968.1    AAAB01008986    EAA00213.1    DQ437579    MG766140    ABD96049.1    AVR59279.1    APCN01003304    ADMH02001995    ETN60053.1    CH478043    EAT34232.2    CH477474    EAT40343.2    PYGN01000709    PSN41879.1    KC439528    KC439529    MG766139    AGX84996.1    AGX84997.1    AVR59278.1    KC439530    AGX84998.1    KC439531    AGX84999.1    JXUM01042212    KQ561315    KXJ79017.1    APGK01041383    KB740993    ENN76071.1    AXCN02001021    GEBQ01018538    JAT21439.1    GECU01007570    JAT00137.1    GBBI01002004    JAC16708.1    NEVH01017441    PNF24618.1    DS232241    EDS38181.1    MG766141    AVR59280.1    GL451937    EFN78163.1    GECZ01022420    JAS47349.1    LBMM01001981    KMQ95450.1    GFDF01007468    JAV06616.1    AJWK01022795    AJWK01022796    GFDF01007397    JAV06687.1    GBRD01000065    GDHC01021596    JAG65756.1    JAP97032.1    KQ976582    KYM79865.1    ADTU01001795    ADTU01001796    KQ982327    KYQ57696.1    KQ981979    KYN31278.1    KZ288345    PBC27615.1    KQ980905    KYN11488.1    KQ435007    KZC13640.1    GL888070    EGI68183.1    GL437132    EFN70952.1    GEDC01010982    JAS26316.1    KQ414670    KOC64326.1    LNIX01000006    OXA53243.1    KQ978292    KYM95529.1    KQ971319    KYB28815.1    KK107078    QOIP01000011    EZA60290.1    RLU17192.1    GDRN01052634    JAI66271.1    MH382826    AXK69167.1    AB817290    BAO01057.1    LJIJ01000202    ODN00510.1    NNAY01000042    OXU31612.1    AGBW02014093    OWR42269.1    GBYB01012507    JAG82274.1    KK852541    KDR21762.1    GGMS01014016    MBY83219.1    JH432222    DS235806    EEB17309.1    GFXV01002307    MBW14112.1    AJVK01027102    JX855828    AGC54822.1   
Pfam
PF00001   7tm_1
Interpro
IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR000611   NPY_rcpt       
PDB
5ZBQ     E-value=1.82914e-37,     Score=392

Ontologies

Topology

Length:
443
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
154.30636
Exp number, first 60 AAs:
11.84693
Total prob of N-in:
0.00060
POSSIBLE N-term signal
sequence
outside
1  -  48
TMhelix
49  -  71
inside
72  -  82
TMhelix
83  -  105
outside
106  -  119
TMhelix
120  -  142
inside
143  -  161
TMhelix
162  -  184
outside
185  -  209
TMhelix
210  -  232
inside
233  -  263
TMhelix
264  -  281
outside
282  -  295
TMhelix
296  -  318
inside
319  -  443
 
 

Population Genetic Test Statistics

Pi
4.008201
Theta
3.494233
Tajima's D
-1.131315
CLR
12.675209
CSRT
0.107244637768112
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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