SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06792
Pre Gene Modal
BGIBMGA012041
Annotation
neuropeptide_receptor_A11_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.92
 

Sequence

CDS
ATGTTCGGAAATGATACTCTTCAGGATGTTATGGCCTCAACGATAGCCGCGAAGTATGAACCAGCCATGTCTCTGAACGGGACCACATATGTGGGCGGGGGGGTCCTTATCCTCACTCGGACTTTGACGGGTGAATCAGTTGAGATGATCGACGAACCGAAAACAAACAAAACGATAGACATAATAGACGTGAAATTAGTTCAGGTCGCTTTTTGCATTCTCTACACAGTAATCTTTGTTCTGGGCGTGTTCGGAAATGTCCTTGTTTGCTATGTGGTTTTCCGCAACAAAGCTATGCAAACAGTCACGAACCTTTTCATAACGAACCTGGCTTTATCAGATATATTGCTGTGTGTCTTCGCCGTACCTTTGACGCCAATGTATACGTTTTTGGGACGATGGGTGTTCGGGAGATTGCTCTGTCATCTGATGCCGTATGCACAAGGAACAAGTGTGTACATATCCACGCTGACGTTGACTTCAATAGCCATAGATAGATTTTTCGTGATAATATACCCGTTTCACCCTAGAATGAAACTGAACACTTGTATTTTTATTGTCATTTTCATATGGGTGTTCTCTTTGGTTGTAACATGTCCTTACGGACTATTCATGGGAATACAGACCACCAACAATGAGACGTATTATTGCGAAGAAAGTTGGCCCTCAGACAGATCTAGAAAAATATTTGGCGTATTTACGACAGTTCTTCAGTTTTTAATACCCTTTTTAGTAATAGCTGTATGCTACACGTGTGTGAGTATAAGATTGAATGATCGGGCTCGGTCAAAACCAGGTGCTAAAAATAGCAAAAGGGAAGAAGCGGACAGAGATAGGAAAAGGTGTACTAACAGAATGTTAATTTCAATGGTCGCGATATTTGGAATCTCGTGGCTTCCTTTGAACTTGATAAATATATTCAACGATTTTTATGCTCAGATGACTGAGTGGAACTATTACTTCGTGTCATTCTTCTTGGCCCACTCTATGGCCATGGCTTCGACTTGCTATAATCCATTTCTTTACGCCTGGTTGAATGAAAACTTCAGAAAGGAATTCAAGCAGGTGTTGCCCTTTTTCGAGTCGAATGGAGGCGTAAGGAATAGTTACCATCCAGGACGTGTGCCACCCCACAAAACTAACAAGAACGTTTGTAATGGCAACGAAACTATACAGGAAACTTTACTGGCGTCCTCGTTCAATAGGGGACCTTCAATCAAACAGAGATTCGAAGGGAACGGGAAGAAAGATAATGGAATCGAAGTTGAAAACATTTTGTTGGAGGACAAAACAATCTCAGCTACTTTTCATACAAAGACCGAAAACGTCAATTTACAACTGATCGATGAGGAGTCACATTTCAGCGATCACAGAGACACAAAGTCACCGATATAA
Protein
MFGNDTLQDVMASTIAAKYEPAMSLNGTTYVGGGVLILTRTLTGESVEMIDEPKTNKTIDIIDVKLVQVAFCILYTVIFVLGVFGNVLVCYVVFRNKAMQTVTNLFITNLALSDILLCVFAVPLTPMYTFLGRWVFGRLLCHLMPYAQGTSVYISTLTLTSIAIDRFFVIIYPFHPRMKLNTCIFIVIFIWVFSLVVTCPYGLFMGIQTTNNETYYCEESWPSDRSRKIFGVFTTVLQFLIPFLVIAVCYTCVSIRLNDRARSKPGAKNSKREEADRDRKRCTNRMLISMVAIFGISWLPLNLINIFNDFYAQMTEWNYYFVSFFLAHSMAMASTCYNPFLYAWLNENFRKEFKQVLPFFESNGGVRNSYHPGRVPPHKTNKNVCNGNETIQETLLASSFNRGPSIKQRFEGNGKKDNGIEVENILLEDKTISATFHTKTENVNLQLIDEESHFSDHRDTKSPI

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01016327    KT224452    ALP48446.1    AB330432    BAG68410.1    NWSH01000283    + More
PCG77773.1    ODYU01006678    SOQ48738.1    KT031009    ALM88307.1    JTDY01004673    KOB67886.1    GDQN01002554    JAT88500.1    KQ461185    KPJ07498.1    KQ459252    KPJ02117.1    AGBW02014093    OWR42269.1    KT031008    ALM88306.1    NWSH01002352    PCG68470.1    BABH01016333    AB330431    BAG68409.1    JTDY01009857    KOB62422.1    ODYU01007985    SOQ51227.1    APGK01041383    KB740993    ENN76071.1    JTDY01002496    KOB71291.1    JXUM01042212    KQ561315    KXJ79017.1    CH478043    EAT34232.2    CH477474    EAT40343.2    KC439530    AGX84998.1    KC439531    AGX84999.1    KC439528    KC439529    MG766139    AGX84996.1    AGX84997.1    AVR59278.1    AXCM01000343    ADMH02001995    ETN60053.1    ATLV01023928    KE525347    KFB49968.1    DS232241    EDS38181.1    MG766141    AVR59280.1    UFQS01001340    UFQS01001735    UFQT01001340    UFQT01001735    SSX10421.1    SSX12089.1    SSX30107.1    PYGN01000709    PSN41879.1    AAAB01008986    EAA00213.1    AXCN02001021    DQ437579    MG766140    ABD96049.1    AVR59279.1    APCN01003304    AJWK01022795    AJWK01022796    GBBI01002004    JAC16708.1    LBMM01001981    KMQ95450.1    NEVH01017441    PNF24618.1    KZ288345    PBC27615.1    GL451937    EFN78163.1    BABH01016315    KQ982327    KYQ57696.1    AB330428    BAG68406.1    KQ976582    KYM79865.1    ADTU01001795    ADTU01001796    KQ980905    KYN11488.1    GL888070    EGI68183.1    KQ981979    KYN31278.1    GFDF01007468    JAV06616.1    KQ971319    KYB28815.1    GFDF01007397    JAV06687.1    GECZ01022420    JAS47349.1    GECU01007570    JAT00137.1    GL437132    EFN70952.1    NWSH01000397    PCG76689.1    KK107078    QOIP01000011    EZA60290.1    RLU17192.1    ODYU01009710    SOQ54331.1    GEBQ01018538    JAT21439.1    GEDC01010982    JAS26316.1    KT031005    ALM88303.1    KQ414670    KOC64326.1    KQ978292    KYM95529.1    GBYB01012507    JAG82274.1    NNAY01000042    OXU31612.1    KQ435007    KZC13640.1    LNIX01000006    OXA53243.1    LJIJ01000202    ODN00510.1    CP012525    ALC45209.1    AB817290    BAO01057.1    GBRD01000065    GDHC01021596    JAG65756.1    JAP97032.1    JTDY01004332    KOB68286.1    CH940647    EDW70381.1    CH916366    EDV96619.1    CH902618    EDV39257.1    CH933809    EDW19391.1    CH963847    EDW72685.2    CM002912    KMZ00682.1    KPJ02118.1    DS235806    EEB17309.1    CM000363    EDX11169.1   
Pfam
PF00001   7tm_1
Interpro
IPR000276   GPCR_Rhodpsn        + More
IPR000611   NPY_rcpt       
IPR017452   GPCR_Rhodpsn_7TM       
PDB
5ZBQ     E-value=2.51186e-41,     Score=425

Ontologies

Topology

Length:
464
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
167.9391
Exp number, first 60 AAs:
10.55883
Total prob of N-in:
0.48313
POSSIBLE N-term signal
sequence
outside
1  -  71
TMhelix
72  -  94
inside
95  -  114
TMhelix
115  -  137
outside
138  -  151
TMhelix
152  -  174
inside
175  -  186
TMhelix
187  -  209
outside
210  -  228
TMhelix
229  -  251
inside
252  -  285
TMhelix
286  -  308
outside
309  -  322
TMhelix
323  -  345
inside
346  -  464
 
 

Population Genetic Test Statistics

Pi
24.794062
Theta
20.175547
Tajima's D
-1.505697
CLR
0.835488
CSRT
0.0589470526473676
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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