Silkworm Genome Informatics Database

Gene

KWMTBOMO06790

Pre Gene Modal

BGIBMGA012114

Annotation

neuropeptide_receptor_A10_[Bombyx_mori]

Location

Bomo_Chr11(-):15014701-15019100 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.048

CDS

ATGTCTTCCACGTGTTACAATCCATTCCTCTATGCTTGGCTCAACGAAAACTTCAGAAAAGAATTCAAGCAAATACTTCCATGTTTGGGTGCTTTCGTTACAAAGAAATCTAAGAGAAAATTTAATCAATCCGATCGTACCGGAATGTACAGATCAGAAAAAACTTGCAACGGCAATGACACGGTACAGGAGTCCCTCTTAACATCAACTATAAATAAGATACCTTCAGTTAGATATAAAATAGAATTCAATGATAAACTGAAAGGATACGACGAAGAAGCCGTAGATAATATTAGTCCAGATGAAAAACCTGAAAGCAACCCGAGTCCCAACGAAGACTGTTTAAATATGTACATGTTTGCAGATAAATCTGTGATTTCTTCAGACAAGGAACCTATAGTATCAGCGCTATAG

Protein

MSSTCYNPFLYAWLNENFRKEFKQILPCLGAFVTKKSKRKFNQSDRTGMYRSEKTCNGNDTVQESLLTSTINKIPSVRYKIEFNDKLKGYDEEAVDNISPDEKPESNPSPNEDCLNMYMFADKSVISSDKEPIVSAL

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

H9JRF4 B3XXM3 A0A0S1YDT6 A0A2A4JAM4 A0A2H1WDX8 A0A0L7L7M3 + More
A0A1E1WNB6 A0A2A4K1Y2 A0A2H1W6Q0 A0A0S1YDL2 A0A212ELB7 A0A139WLV7 A0A194Q9C5 A0A0L7KXV9 H9JR81 B3XXM4 A0A1W4XQD5 A0A026WW28 E0VVA3

Pubmed

19121390 18725956 26227816 22118469 18362917 19820115 + More
26354079 24508170 30249741 20566863

EMBL

BABH01016333 AB330431 BAG68409.1 KT031008 ALM88306.1 NWSH01002352 + More
PCG68470.1 ODYU01007985 SOQ51227.1 JTDY01002496 KOB71291.1 GDQN01002554 JAT88500.1 NWSH01000283 PCG77773.1 ODYU01006678 SOQ48738.1 KT031009 ALM88307.1 AGBW02014093 OWR42269.1 KQ971319 KYB28815.1 KQ459252 KPJ02117.1 JTDY01004673 KOB67886.1 BABH01016327 KT224452 ALP48446.1 AB330432 BAG68410.1 KK107078 QOIP01000011 EZA60290.1 RLU17192.1 DS235806 EEB17309.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000007151 UP000007266 UP000053268 + More
UP000192223 UP000053097 UP000279307 UP000009046

PRIDE

H9JRF4 B3XXM3 H9JR81 B3XXM4

Pfam

PF00001 7tm_1

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn
IPR000611   NPY_rcpt

ProteinModelPortal

H9JRF4 B3XXM3 A0A0S1YDT6 A0A2A4JAM4 A0A2H1WDX8 A0A0L7L7M3 + More
A0A1E1WNB6 A0A2A4K1Y2 A0A2H1W6Q0 A0A0S1YDL2 A0A212ELB7 A0A139WLV7 A0A194Q9C5 A0A0L7KXV9 H9JR81 B3XXM4 A0A1W4XQD5 A0A026WW28 E0VVA3

PDB

6ME9 E-value=0.0137722, Score=83

KEGG

100174914 K04209 neuropeptide F receptor | (RefSeq) NGR-A10, BNGR-A10; neuropeptide receptor A10

GO

GO:0004983 GO:0016021 GO:0050254

Length:

137

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.09208

outside

1 - 137

Pi

18.829286

Theta

18.400533

Tajima's D

-0.44525

CLR

0.393956

CSRT

0.256487175641218

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics